Gene annotation
Transcriptome id Sobic.001G387900.1
Synonym Sb01g036770, J20
Functional annotation Chaperone - similar to Cluster: DnaJ domain containing protein (PubMedID : 24655390)
Oryza sativa (PubMedID : 27586543)
"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 24655390)
chaperone protein dnaJ, putative, expressed
UniProt C5X1R8
Pfam PF00226
Panther DB PTHR24078
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G13830 : DNAJ-like 20
RAP-DB (Rice) LOC_Os03g20730.1 : chaperone protein dnaJ, putative, expressed
MaizeGDB (Corn) Zm00025a002260
Brachypodium -
Barley HORVU4Hr1G051730.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G108200 expressed protein -
2 Sobic.001G308300 expressed protein -
3 Sobic.004G141200 cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
4 Sobic.003G382800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
5 Sobic.003G086600 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
6 Sobic.006G158600 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
7 Sobic.003G078100 B3 DNA binding domain containing protein, expressed -
8 Sobic.003G369100 AP2 domain containing protein, expressed -
9 Sobic.004G304625 - K15095: (+)-neomenthol dehydrogenase
10 Sobic.003G355100 expressed protein -
11 Sobic.001G405500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pyruvate decarboxylase isozyme 2, putative, expressed K01568: PDC, pyruvate decarboxylase
12 Sobic.004G100700 ethylene-responsive transcription factor TINY, putative, expressed K09286: EREBP-like factor
13 Sobic.008G136400 expressed protein -
14 Sobic.009G008900 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
15 Sobic.003G349700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS1-15 - C2H2 zinc finger protein, expressed -
16 Sobic.002G361100 similar to Glutathione transferase(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
17 Sobic.006G275200 CHCH domain containing protein, expressed -
18 Sobic.006G056400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
19 Sobic.003G393900 Fructose-bisphosphate aldolase(PubMedID : 26186930)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
20 Sobic.001G423800 DNA binding protein, putative, expressed -


Gene co-expression network
sample Sobic001G387900 Sobic001G387900 Sobic001G108200 Sobic001G108200 Sobic001G387900--Sobic001G108200 Sobic001G308300 Sobic001G308300 Sobic001G387900--Sobic001G308300 Sobic004G141200 Sobic004G141200 Sobic001G387900--Sobic004G141200 Sobic003G382800 Sobic003G382800 Sobic001G387900--Sobic003G382800 Sobic003G086600 Sobic003G086600 Sobic001G387900--Sobic003G086600 Sobic006G158600 Sobic006G158600 Sobic001G387900--Sobic006G158600 Sobic003G078100 Sobic003G078100 Sobic001G387900--Sobic003G078100 Sobic003G369100 Sobic003G369100 Sobic001G387900--Sobic003G369100 Sobic004G304625 Sobic004G304625 Sobic001G387900--Sobic004G304625 Sobic001G108200--Sobic004G141200 Sobic003G393900 Sobic003G393900 Sobic001G108200--Sobic003G393900 Sobic004G100700 Sobic004G100700 Sobic001G108200--Sobic004G100700 Sobic001G108200--Sobic003G369100 Sobic001G108200--Sobic003G086600 Sobic003G355100 Sobic003G355100 Sobic001G108200--Sobic003G355100 Sobic007G214600 Sobic007G214600 Sobic001G108200--Sobic007G214600 Sobic001G108200--Sobic003G382800 Sobic005G099000 Sobic005G099000 Sobic001G108200--Sobic005G099000 Sobic002G140400 Sobic002G140400 Sobic001G308300--Sobic002G140400 Sobic001G308300--Sobic003G369100 Sobic001G308300--Sobic004G141200 Sobic001G308300--Sobic001G108200 Sobic007G074000 Sobic007G074000 Sobic001G308300--Sobic007G074000 Sobic001G308300--Sobic001G387900 Sobic001G038900 Sobic001G038900 Sobic001G308300--Sobic001G038900 Sobic003G364600 Sobic003G364600 Sobic001G308300--Sobic003G364600 Sobic001G308300--Sobic006G158600 Sobic004G141200--Sobic003G369100 Sobic004G141200--Sobic001G108200 Sobic004G141200--Sobic007G074000 Sobic004G141200--Sobic003G393900 Sobic001G459800 Sobic001G459800 Sobic004G141200--Sobic001G459800 Sobic004G141200--Sobic004G304625 Sobic001G138600 Sobic001G138600 Sobic004G141200--Sobic001G138600 Sobic001G391500 Sobic001G391500 Sobic004G141200--Sobic001G391500 Sobic004G141200--Sobic004G100700 Sobic003G382800--Sobic001G138600 Sobic003G382800--Sobic004G141200 Sobic001G169500 Sobic001G169500 Sobic003G382800--Sobic001G169500 Sobic003G382800--Sobic001G108200 Sobic003G394400 Sobic003G394400 Sobic003G382800--Sobic003G394400 Sobic004G166200 Sobic004G166200 Sobic003G382800--Sobic004G166200 Sobic002G068600 Sobic002G068600 Sobic003G382800--Sobic002G068600 Sobic003G382800--Sobic003G086600 Sobic003G148600 Sobic003G148600 Sobic003G382800--Sobic003G148600 Sobic003G086600--Sobic002G068600 Sobic003G086600--Sobic003G394400 Sobic001G405500 Sobic001G405500 Sobic003G086600--Sobic001G405500 Sobic003G086600--Sobic001G108200 Sobic003G086600--Sobic004G166200 Sobic003G086600--Sobic003G382800 Sobic003G086600--Sobic003G355100 Sobic001G397200 Sobic001G397200 Sobic003G086600--Sobic001G397200 Sobic007G026600 Sobic007G026600 Sobic003G086600--Sobic007G026600 Sobic008G136400 Sobic008G136400 Sobic006G158600--Sobic008G136400 Sobic002G192000 Sobic002G192000 Sobic006G158600--Sobic002G192000 Sobic006G158600--Sobic002G140400 Sobic002G333400 Sobic002G333400 Sobic006G158600--Sobic002G333400 Sobic006G056400 Sobic006G056400 Sobic006G158600--Sobic006G056400 Sobic006G158600--Sobic001G038900 Sobic001G423800 Sobic001G423800 Sobic006G158600--Sobic001G423800 Sobic002G336600 Sobic002G336600 Sobic006G158600--Sobic002G336600 Sobic004G243100 Sobic004G243100 Sobic006G158600--Sobic004G243100 Sobic009G008900 Sobic009G008900 Sobic003G078100--Sobic009G008900 Sobic002G393000 Sobic002G393000 Sobic003G078100--Sobic002G393000 Sobic003G078100--Sobic006G158600 Sobic003G078100--Sobic001G387900 Sobic003G078100--Sobic001G423800 Sobic006G275200 Sobic006G275200 Sobic003G078100--Sobic006G275200 Sobic007G057000 Sobic007G057000 Sobic003G078100--Sobic007G057000 Sobic001G119400 Sobic001G119400 Sobic003G078100--Sobic001G119400 Sobic002G361100 Sobic002G361100 Sobic003G078100--Sobic002G361100 Sobic003G369100--Sobic004G141200 Sobic003G369100--Sobic007G074000 Sobic003G369100--Sobic001G138600 Sobic003G369100--Sobic001G108200 Sobic001G140900 Sobic001G140900 Sobic003G369100--Sobic001G140900 Sobic001G112200 Sobic001G112200 Sobic003G369100--Sobic001G112200 Sobic003G345100 Sobic003G345100 Sobic003G369100--Sobic003G345100 Sobic008G050600 Sobic008G050600 Sobic003G369100--Sobic008G050600 Sobic003G369100--Sobic001G308300 Sobic004G304625--Sobic004G141200 Sobic004G304625--Sobic001G108200 Sobic002G188900 Sobic002G188900 Sobic004G304625--Sobic002G188900 Sobic004G304625--Sobic003G369100 Sobic004G304625--Sobic001G140900 Sobic007G036900 Sobic007G036900 Sobic004G304625--Sobic007G036900 Sobic004G304625--Sobic003G393900 Sobic003G033900 Sobic003G033900 Sobic004G304625--Sobic003G033900 Sobic004G304625--Sobic007G057000
Octagon: transcription factors


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