Gene annotation
Transcriptome id Sobic.006G207100.1
Synonym Sb06g027800
Functional annotation expressed protein
UniProt C5YFJ1
Pfam -
Panther DB PTHR33320 PTHR33320:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G29905 : -
RAP-DB (Rice) LOC_Os04g51680.1 : expressed protein
MaizeGDB (Corn) Zm00025a009885
Brachypodium -
Barley HORVU2Hr1G100960.1 , HORVU2Hr1G100870.1
Wheat -
Populus -


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cDNA sequences
Sobic.006G207100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G207000 expressed protein -
2 Sobic.004G004500 lactate/malate dehydrogenase, putative, expressed K00016: LDH, L-lactate dehydrogenase
3 Sobic.003G116800 cinnamoyl CoA reductase, putative, expressed K09753: cinnamoyl-CoA reductase
4 Sobic.002G339000 OsFBX257 - F-box domain containing protein, expressed -
5 Sobic.004G086400 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
6 Sobic.001G108200 expressed protein -
7 Sobic.007G036900 triacylglycerol lipase like protein, putative, expressed -
8 Sobic.001G256700 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
9 Sobic.003G148300 pectinesterase, putative, expressed K01051: pectinesterase
10 Sobic.004G229800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
11 Sobic.001G219200 myb-related protein Myb4, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.001G100600 expressed protein -
13 Sobic.004G141200 cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
14 Sobic.003G349700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS1-15 - C2H2 zinc finger protein, expressed -
15 Sobic.004G108200 cytochrome P450 93A2, putative, expressed -
16 Sobic.005G099000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed -
17 Sobic.002G395300 gibberellin receptor GID1L2, putative, expressed -
18 Sobic.007G214600 EF hand family protein, putative, expressed -
19 Sobic.001G330100 ZOS3-12 - C2H2 zinc finger protein, expressed -
20 Sobic.004G301000 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -


Gene co-expression network
sample Sobic006G207100 Sobic006G207100 Sobic006G207000 Sobic006G207000 Sobic006G207100--Sobic006G207000 Sobic004G004500 Sobic004G004500 Sobic006G207100--Sobic004G004500 Sobic003G116800 Sobic003G116800 Sobic006G207100--Sobic003G116800 Sobic002G339000 Sobic002G339000 Sobic006G207100--Sobic002G339000 Sobic004G086400 Sobic004G086400 Sobic006G207100--Sobic004G086400 Sobic001G108200 Sobic001G108200 Sobic006G207100--Sobic001G108200 Sobic007G036900 Sobic007G036900 Sobic006G207100--Sobic007G036900 Sobic001G256700 Sobic001G256700 Sobic006G207100--Sobic001G256700 Sobic003G148300 Sobic003G148300 Sobic006G207100--Sobic003G148300 Sobic006G207000--Sobic003G116800 Sobic006G207000--Sobic004G086400 Sobic006G207000--Sobic006G207100 Sobic010G196600 Sobic010G196600 Sobic006G207000--Sobic010G196600 Sobic006G207000--Sobic002G339000 Sobic006G207000--Sobic003G148300 Sobic001G425500 Sobic001G425500 Sobic006G207000--Sobic001G425500 Sobic007G155200 Sobic007G155200 Sobic006G207000--Sobic007G155200 Sobic006G207000--Sobic004G004500 Sobic004G004500--Sobic002G339000 Sobic004G004500--Sobic001G256700 Sobic004G004500--Sobic007G036900 Sobic004G004500--Sobic003G148300 Sobic004G108200 Sobic004G108200 Sobic004G004500--Sobic004G108200 Sobic001G195200 Sobic001G195200 Sobic004G004500--Sobic001G195200 Sobic009G189501 Sobic009G189501 Sobic004G004500--Sobic009G189501 Sobic004G294400 Sobic004G294400 Sobic004G004500--Sobic004G294400 Sobic004G229800 Sobic004G229800 Sobic004G004500--Sobic004G229800 Sobic005G099000 Sobic005G099000 Sobic003G116800--Sobic005G099000 Sobic005G063100 Sobic005G063100 Sobic003G116800--Sobic005G063100 Sobic003G286600 Sobic003G286600 Sobic003G116800--Sobic003G286600 Sobic003G116800--Sobic001G108200 Sobic001G435000 Sobic001G435000 Sobic003G116800--Sobic001G435000 Sobic010G176600 Sobic010G176600 Sobic003G116800--Sobic010G176600 Sobic004G301000 Sobic004G301000 Sobic003G116800--Sobic004G301000 Sobic003G116800--Sobic004G229800 Sobic003G345100 Sobic003G345100 Sobic003G116800--Sobic003G345100 Sobic002G339000--Sobic004G004500 Sobic002G339000--Sobic001G256700 Sobic002G339000--Sobic007G036900 Sobic002G339000--Sobic003G148300 Sobic002G339000--Sobic001G195200 Sobic004G169200 Sobic004G169200 Sobic002G339000--Sobic004G169200 Sobic002G339000--Sobic004G108200 Sobic002G395300 Sobic002G395300 Sobic002G339000--Sobic002G395300 Sobic007G214600 Sobic007G214600 Sobic002G339000--Sobic007G214600 Sobic004G086400--Sobic003G148300 Sobic004G086400--Sobic004G108200 Sobic004G086400--Sobic004G004500 Sobic010G212800 Sobic010G212800 Sobic004G086400--Sobic010G212800 Sobic004G086400--Sobic006G207000 Sobic007G006300 Sobic007G006300 Sobic004G086400--Sobic007G006300 Sobic002G234400 Sobic002G234400 Sobic004G086400--Sobic002G234400 Sobic004G086400--Sobic002G339000 Sobic004G086400--Sobic009G189501 Sobic004G141200 Sobic004G141200 Sobic001G108200--Sobic004G141200 Sobic003G393900 Sobic003G393900 Sobic001G108200--Sobic003G393900 Sobic004G100700 Sobic004G100700 Sobic001G108200--Sobic004G100700 Sobic003G369100 Sobic003G369100 Sobic001G108200--Sobic003G369100 Sobic003G086600 Sobic003G086600 Sobic001G108200--Sobic003G086600 Sobic003G355100 Sobic003G355100 Sobic001G108200--Sobic003G355100 Sobic001G108200--Sobic007G214600 Sobic003G382800 Sobic003G382800 Sobic001G108200--Sobic003G382800 Sobic001G108200--Sobic005G099000 Sobic007G036900--Sobic004G004500 Sobic008G187001 Sobic008G187001 Sobic007G036900--Sobic008G187001 Sobic007G036900--Sobic004G229800 Sobic007G036900--Sobic001G256700 Sobic007G036900--Sobic004G141200 Sobic007G036900--Sobic002G339000 Sobic003G364600 Sobic003G364600 Sobic007G036900--Sobic003G364600 Sobic007G036900--Sobic001G108200 Sobic001G079300 Sobic001G079300 Sobic007G036900--Sobic001G079300 Sobic001G256700--Sobic008G187001 Sobic001G256700--Sobic004G004500 Sobic002G388900 Sobic002G388900 Sobic001G256700--Sobic002G388900 Sobic001G256700--Sobic004G294400 Sobic004G219800 Sobic004G219800 Sobic001G256700--Sobic004G219800 Sobic001G256700--Sobic002G395300 Sobic001G256700--Sobic002G339000 Sobic001G330100 Sobic001G330100 Sobic001G256700--Sobic001G330100 Sobic001G256700--Sobic001G195200 Sobic003G148300--Sobic004G108200 Sobic003G148300--Sobic004G004500 Sobic003G148300--Sobic004G086400 Sobic009G144700 Sobic009G144700 Sobic003G148300--Sobic009G144700 Sobic003G148300--Sobic004G294400 Sobic003G148300--Sobic001G256700 Sobic003G148300--Sobic001G330100 Sobic003G148300--Sobic002G339000 Sobic003G148300--Sobic010G212800
Octagon: transcription factors


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