Gene annotation
Transcriptome id Sobic.002G338250.1
Synonym -
Functional annotation -
UniProt A0A1W0W6V9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g37280.1 : hypothetical protein
MaizeGDB (Corn) -
Brachypodium PNT74951
Barley -
Wheat TraesCS2A02G205900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G074200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- -
2 Sobic.004G117600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@WRKY39, expressed -
3 Sobic.009G154200 MYB family transcription factor, putative, expressed -
4 Sobic.002G393600 GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.008G111500 membrane associated DUF588 domain containing protein, putative, expressed -
6 Sobic.001G389900 aquaporin SIP2-1, putative, expressed K09875: aquaporin SIP
7 Sobic.003G349700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS1-15 - C2H2 zinc finger protein, expressed -
8 Sobic.001G447100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ATP8, putative, expressed -
9 Sobic.006G136800 "shikimate hydroxycinnamoyl transferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
10 Sobic.001G070800 expressed protein -
11 Sobic.003G393700 zinc finger, RING-type, putative, expressed -
12 Sobic.009G159400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@universal stress protein domain containing protein, putative, expressed -
13 Sobic.003G041200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.003G088400 Up-reguralion under drought(PubMedID : 24916767)@BBTI11 - Bowman-Birk type bran trypsin inhibitor precursor, putative, expressed -
15 Sobic.003G352300 triosephosphate isomerase(PubMedID : 27016024)@triosephosphate isomerase, cytosolic, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)
16 Sobic.001G481600 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
17 Sobic.009G229000 expressed protein -
18 Sobic.009G232800 zinc finger, C3HC4 type domain containing protein, expressed K19041: E3 ubiquitin-protein ligase RNF38/44
19 Sobic.007G015600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@- -
20 Sobic.003G345100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -


Gene co-expression network
sample Sobic002G338250 Sobic002G338250 Sobic007G074200 Sobic007G074200 Sobic002G338250--Sobic007G074200 Sobic004G117600 Sobic004G117600 Sobic002G338250--Sobic004G117600 Sobic009G154200 Sobic009G154200 Sobic002G338250--Sobic009G154200 Sobic002G393600 Sobic002G393600 Sobic002G338250--Sobic002G393600 Sobic008G111500 Sobic008G111500 Sobic002G338250--Sobic008G111500 Sobic001G389900 Sobic001G389900 Sobic002G338250--Sobic001G389900 Sobic003G349700 Sobic003G349700 Sobic002G338250--Sobic003G349700 Sobic001G447100 Sobic001G447100 Sobic002G338250--Sobic001G447100 Sobic006G136800 Sobic006G136800 Sobic002G338250--Sobic006G136800 Sobic007G074200--Sobic008G111500 Sobic007G074200--Sobic002G393600 Sobic007G074200--Sobic002G338250 Sobic007G074200--Sobic001G447100 Sobic007G074200--Sobic004G117600 Sobic009G131400 Sobic009G131400 Sobic007G074200--Sobic009G131400 Sobic003G146400 Sobic003G146400 Sobic007G074200--Sobic003G146400 Sobic007G074200--Sobic003G349700 Sobic007G074200--Sobic009G154200 Sobic004G117600--Sobic007G074200 Sobic004G117600--Sobic002G338250 Sobic004G117600--Sobic009G154200 Sobic004G117600--Sobic008G111500 Sobic004G117600--Sobic002G393600 Sobic009G159400 Sobic009G159400 Sobic004G117600--Sobic009G159400 Sobic004G301300 Sobic004G301300 Sobic004G117600--Sobic004G301300 Sobic002G239200 Sobic002G239200 Sobic004G117600--Sobic002G239200 Sobic004G117600--Sobic006G136800 Sobic007G008100 Sobic007G008100 Sobic009G154200--Sobic007G008100 Sobic003G364300 Sobic003G364300 Sobic009G154200--Sobic003G364300 Sobic004G336500 Sobic004G336500 Sobic009G154200--Sobic004G336500 Sobic010G156500 Sobic010G156500 Sobic009G154200--Sobic010G156500 Sobic003G382600 Sobic003G382600 Sobic009G154200--Sobic003G382600 Sobic009G231000 Sobic009G231000 Sobic009G154200--Sobic009G231000 Sobic001G279500 Sobic001G279500 Sobic009G154200--Sobic001G279500 Sobic003G345100 Sobic003G345100 Sobic009G154200--Sobic003G345100 Sobic001G112200 Sobic001G112200 Sobic009G154200--Sobic001G112200 Sobic002G393600--Sobic007G074200 Sobic002G393600--Sobic002G338250 Sobic002G393600--Sobic004G117600 Sobic002G393600--Sobic008G111500 Sobic001G488000 Sobic001G488000 Sobic002G393600--Sobic001G488000 Sobic002G393600--Sobic009G131400 Sobic002G393600--Sobic003G146400 Sobic006G198800 Sobic006G198800 Sobic002G393600--Sobic006G198800 Sobic002G393600--Sobic006G136800 Sobic008G111500--Sobic007G074200 Sobic008G111500--Sobic009G131400 Sobic008G111500--Sobic001G447100 Sobic006G100200 Sobic006G100200 Sobic008G111500--Sobic006G100200 Sobic008G111500--Sobic003G349700 Sobic008G111500--Sobic004G117600 Sobic008G111500--Sobic002G338250 Sobic001G100600 Sobic001G100600 Sobic008G111500--Sobic001G100600 Sobic008G111500--Sobic002G393600 Sobic003G403400 Sobic003G403400 Sobic001G389900--Sobic003G403400 Sobic009G232800 Sobic009G232800 Sobic001G389900--Sobic009G232800 Sobic001G477300 Sobic001G477300 Sobic001G389900--Sobic001G477300 Sobic002G046100 Sobic002G046100 Sobic001G389900--Sobic002G046100 Sobic004G177700 Sobic004G177700 Sobic001G389900--Sobic004G177700 Sobic009G063900 Sobic009G063900 Sobic001G389900--Sobic009G063900 Sobic001G066700 Sobic001G066700 Sobic001G389900--Sobic001G066700 Sobic001G389900--Sobic001G447100 Sobic003G072300 Sobic003G072300 Sobic001G389900--Sobic003G072300 Sobic003G349700--Sobic001G447100 Sobic001G387900 Sobic001G387900 Sobic003G349700--Sobic001G387900 Sobic001G108200 Sobic001G108200 Sobic003G349700--Sobic001G108200 Sobic003G349700--Sobic001G100600 Sobic001G308300 Sobic001G308300 Sobic003G349700--Sobic001G308300 Sobic002G336600 Sobic002G336600 Sobic003G349700--Sobic002G336600 Sobic003G041200 Sobic003G041200 Sobic003G349700--Sobic003G041200 Sobic004G141200 Sobic004G141200 Sobic003G349700--Sobic004G141200 Sobic003G369100 Sobic003G369100 Sobic003G349700--Sobic003G369100 Sobic001G447100--Sobic003G349700 Sobic004G024200 Sobic004G024200 Sobic001G447100--Sobic004G024200 Sobic007G176600 Sobic007G176600 Sobic001G447100--Sobic007G176600 Sobic001G447100--Sobic008G111500 Sobic001G447100--Sobic007G074200 Sobic001G447100--Sobic001G100600 Sobic001G447100--Sobic001G477300 Sobic001G447100--Sobic009G131400 Sobic001G447100--Sobic003G041200 Sobic004G046200 Sobic004G046200 Sobic006G136800--Sobic004G046200 Sobic002G081600 Sobic002G081600 Sobic006G136800--Sobic002G081600 Sobic003G436700 Sobic003G436700 Sobic006G136800--Sobic003G436700 Sobic001G295200 Sobic001G295200 Sobic006G136800--Sobic001G295200 Sobic001G036900 Sobic001G036900 Sobic006G136800--Sobic001G036900 Sobic004G205100 Sobic004G205100 Sobic006G136800--Sobic004G205100 Sobic004G340900 Sobic004G340900 Sobic006G136800--Sobic004G340900 Sobic001G389000 Sobic001G389000 Sobic006G136800--Sobic001G389000 Sobic001G500000 Sobic001G500000 Sobic006G136800--Sobic001G500000
Octagon: transcription factors


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