Gene annotation
Transcriptome id Sobic.001G389900.1
Synonym 1, Sb01g036970, SIP2
Functional annotation aquaporin SIP2-1, putative, expressed
UniProt C5X1T8
Pfam PF00230
Panther DB PTHR19139 PTHR19139:SF128
NCBI CDD -
KEGG Orthology K09875; aquaporin SIP
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT3G56950 : small and basic intrinsic protein 2;1
RAP-DB (Rice) LOC_Os03g20410.1 : aquaporin SIP2-1, putative, expressed
MaizeGDB (Corn) Zm00025a002232
Brachypodium -
Barley HORVU4Hr1G052170.25 , HORVU4Hr1G052170.26
Wheat TraesCS4B02G178000 , TraesCS4B02G178000 , TraesCS4A02G126900 , TraesCS4D02G179600
Populus -


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cDNA sequences
Sobic.001G389900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G403400 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.009G232800 zinc finger, C3HC4 type domain containing protein, expressed K19041: E3 ubiquitin-protein ligase RNF38/44
3 Sobic.001G477300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GRAM domain containing protein, expressed -
4 Sobic.002G046100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
5 Sobic.004G177700 AIG1, putative, expressed -
6 Sobic.009G063900 expressed protein -
7 Sobic.001G066700 GLTP domain containing protein, putative, expressed -
8 Sobic.001G447100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ATP8, putative, expressed -
9 Sobic.003G072300 triosephosphate isomerase(PubMedID : 27016024)@triosephosphate isomerase, cytosolic, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)
10 Sobic.002G187500 hypoxia-responsive family protein, putative, expressed -
11 Sobic.006G062800 OTU-like cysteine protease family protein, putative, expressed -
12 Sobic.003G285800 ubiquitin domain-containing protein 1, putative, expressed -
13 Sobic.003G393700 zinc finger, RING-type, putative, expressed -
14 Sobic.003G063200 uncharacterized Cys-rich domain containing protein, putative, expressed -
15 Sobic.002G393000 pyrrolidone-carboxylate peptidase, putative, expressed K01304: pyroglutamyl-peptidase
16 Sobic.003G350300 ubiquitin-conjugating enzyme, putative, expressed K10575: UBE2G1, ubiquitin-conjugating enzyme E2 G1
17 Sobic.004G061200 expressed protein -
18 Sobic.002G338250 - -
19 Sobic.006G173900 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
20 Sobic.010G099900 expressed protein -


Gene co-expression network
sample Sobic001G389900 Sobic001G389900 Sobic003G403400 Sobic003G403400 Sobic001G389900--Sobic003G403400 Sobic009G232800 Sobic009G232800 Sobic001G389900--Sobic009G232800 Sobic001G477300 Sobic001G477300 Sobic001G389900--Sobic001G477300 Sobic002G046100 Sobic002G046100 Sobic001G389900--Sobic002G046100 Sobic004G177700 Sobic004G177700 Sobic001G389900--Sobic004G177700 Sobic009G063900 Sobic009G063900 Sobic001G389900--Sobic009G063900 Sobic001G066700 Sobic001G066700 Sobic001G389900--Sobic001G066700 Sobic001G447100 Sobic001G447100 Sobic001G389900--Sobic001G447100 Sobic003G072300 Sobic003G072300 Sobic001G389900--Sobic003G072300 Sobic003G403400--Sobic001G389900 Sobic003G403400--Sobic001G066700 Sobic003G063200 Sobic003G063200 Sobic003G403400--Sobic003G063200 Sobic002G218000 Sobic002G218000 Sobic003G403400--Sobic002G218000 Sobic005G111100 Sobic005G111100 Sobic003G403400--Sobic005G111100 Sobic003G350300 Sobic003G350300 Sobic003G403400--Sobic003G350300 Sobic010G225300 Sobic010G225300 Sobic003G403400--Sobic010G225300 Sobic003G403400--Sobic009G232800 Sobic004G265700 Sobic004G265700 Sobic003G403400--Sobic004G265700 Sobic009G232800--Sobic001G389900 Sobic009G232800--Sobic003G403400 Sobic002G251900 Sobic002G251900 Sobic009G232800--Sobic002G251900 Sobic006G062800 Sobic006G062800 Sobic009G232800--Sobic006G062800 Sobic009G232800--Sobic002G046100 Sobic003G285800 Sobic003G285800 Sobic009G232800--Sobic003G285800 Sobic004G024200 Sobic004G024200 Sobic009G232800--Sobic004G024200 Sobic009G232800--Sobic001G447100 Sobic003G249800 Sobic003G249800 Sobic009G232800--Sobic003G249800 Sobic001G124600 Sobic001G124600 Sobic001G477300--Sobic001G124600 Sobic004G187900 Sobic004G187900 Sobic001G477300--Sobic004G187900 Sobic001G477300--Sobic002G046100 Sobic001G308300 Sobic001G308300 Sobic001G477300--Sobic001G308300 Sobic010G086200 Sobic010G086200 Sobic001G477300--Sobic010G086200 Sobic006G267200 Sobic006G267200 Sobic001G477300--Sobic006G267200 Sobic009G129000 Sobic009G129000 Sobic001G477300--Sobic009G129000 Sobic009G159400 Sobic009G159400 Sobic001G477300--Sobic009G159400 Sobic004G065500 Sobic004G065500 Sobic001G477300--Sobic004G065500 Sobic002G046100--Sobic003G285800 Sobic001G281400 Sobic001G281400 Sobic002G046100--Sobic001G281400 Sobic002G345300 Sobic002G345300 Sobic002G046100--Sobic002G345300 Sobic002G187500 Sobic002G187500 Sobic002G046100--Sobic002G187500 Sobic002G046100--Sobic010G086200 Sobic004G061200 Sobic004G061200 Sobic002G046100--Sobic004G061200 Sobic002G046100--Sobic001G477300 Sobic002G267500 Sobic002G267500 Sobic002G046100--Sobic002G267500 Sobic002G190900 Sobic002G190900 Sobic002G046100--Sobic002G190900 Sobic006G173900 Sobic006G173900 Sobic004G177700--Sobic006G173900 Sobic002G393000 Sobic002G393000 Sobic004G177700--Sobic002G393000 Sobic006G275200 Sobic006G275200 Sobic004G177700--Sobic006G275200 Sobic010G099900 Sobic010G099900 Sobic004G177700--Sobic010G099900 Sobic009G008900 Sobic009G008900 Sobic004G177700--Sobic009G008900 Sobic004G177700--Sobic010G086200 Sobic010G149300 Sobic010G149300 Sobic004G177700--Sobic010G149300 Sobic006G230500 Sobic006G230500 Sobic004G177700--Sobic006G230500 Sobic002G414600 Sobic002G414600 Sobic004G177700--Sobic002G414600 Sobic009G063900--Sobic006G275200 Sobic001G097600 Sobic001G097600 Sobic009G063900--Sobic001G097600 Sobic009G063900--Sobic002G393000 Sobic003G086600 Sobic003G086600 Sobic009G063900--Sobic003G086600 Sobic004G280200 Sobic004G280200 Sobic009G063900--Sobic004G280200 Sobic004G205100 Sobic004G205100 Sobic009G063900--Sobic004G205100 Sobic009G183400 Sobic009G183400 Sobic009G063900--Sobic009G183400 Sobic001G405500 Sobic001G405500 Sobic009G063900--Sobic001G405500 Sobic001G309600 Sobic001G309600 Sobic009G063900--Sobic001G309600 Sobic003G358300 Sobic003G358300 Sobic001G066700--Sobic003G358300 Sobic001G066700--Sobic003G403400 Sobic001G066700--Sobic002G218000 Sobic001G066700--Sobic005G111100 Sobic009G191600 Sobic009G191600 Sobic001G066700--Sobic009G191600 Sobic010G266300 Sobic010G266300 Sobic001G066700--Sobic010G266300 Sobic003G233500 Sobic003G233500 Sobic001G066700--Sobic003G233500 Sobic001G066700--Sobic010G225300 Sobic009G070200 Sobic009G070200 Sobic001G066700--Sobic009G070200 Sobic003G349700 Sobic003G349700 Sobic001G447100--Sobic003G349700 Sobic001G447100--Sobic004G024200 Sobic007G176600 Sobic007G176600 Sobic001G447100--Sobic007G176600 Sobic008G111500 Sobic008G111500 Sobic001G447100--Sobic008G111500 Sobic007G074200 Sobic007G074200 Sobic001G447100--Sobic007G074200 Sobic001G100600 Sobic001G100600 Sobic001G447100--Sobic001G100600 Sobic001G447100--Sobic001G477300 Sobic009G131400 Sobic009G131400 Sobic001G447100--Sobic009G131400 Sobic003G041200 Sobic003G041200 Sobic001G447100--Sobic003G041200 Sobic002G081600 Sobic002G081600 Sobic003G072300--Sobic002G081600 Sobic003G072300--Sobic004G205100 Sobic003G072300--Sobic002G187500 Sobic003G209000 Sobic003G209000 Sobic003G072300--Sobic003G209000 Sobic003G072300--Sobic002G190900 Sobic006G213000 Sobic006G213000 Sobic003G072300--Sobic006G213000 Sobic010G204500 Sobic010G204500 Sobic003G072300--Sobic010G204500 Sobic003G155400 Sobic003G155400 Sobic003G072300--Sobic003G155400 Sobic002G379500 Sobic002G379500 Sobic003G072300--Sobic002G379500
Octagon: transcription factors


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