Gene annotation
Transcriptome id Sobic.007G176600.1
Synonym Sb07g024840
Functional annotation expressed protein
UniProt C5YH25
Pfam -
Panther DB PTHR35167 PTHR35167:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os08g43620.1 : expressed protein
MaizeGDB (Corn) Zm00025a005675 , Zm00025a034226
Brachypodium KQJ99284
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G447100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ATP8, putative, expressed -
2 Sobic.003G349700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS1-15 - C2H2 zinc finger protein, expressed -
3 Sobic.006G207000 expressed protein -
4 Sobic.006G207100 expressed protein -
5 Sobic.004G024200 similar to Bax inhibitor 1(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@transmembrane BAX inhibitor motif-containing protein, putative, expressed -
6 Sobic.010G196600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.004G037000 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
8 Sobic.004G086400 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
9 Sobic.007G155200 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
10 Sobic.009G224100 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
11 Sobic.002G339000 OsFBX257 - F-box domain containing protein, expressed -
12 Sobic.004G228500 plastocyanin-like domain containing protein, putative, expressed -
13 Sobic.001G426000 Up-reguralion under heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
14 Sobic.010G223600 ubiquitin family protein, putative, expressed K08770: ubiquitin C
15 Sobic.001G035100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@ZOS3-21 - C2H2 zinc finger protein, expressed -
16 Sobic.009G194400 expressed protein -
17 Sobic.004G109700 zinc finger, C3HC4 type domain containing protein, expressed -
18 Sobic.003G323201 - -
19 Sobic.009G036000 similar to Hydrophobic protein LTI6B(PubMedID : 29862293)@OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
20 Sobic.002G184200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -


Gene co-expression network
sample Sobic007G176600 Sobic007G176600 Sobic001G447100 Sobic001G447100 Sobic007G176600--Sobic001G447100 Sobic003G349700 Sobic003G349700 Sobic007G176600--Sobic003G349700 Sobic006G207000 Sobic006G207000 Sobic007G176600--Sobic006G207000 Sobic006G207100 Sobic006G207100 Sobic007G176600--Sobic006G207100 Sobic004G024200 Sobic004G024200 Sobic007G176600--Sobic004G024200 Sobic010G196600 Sobic010G196600 Sobic007G176600--Sobic010G196600 Sobic004G037000 Sobic004G037000 Sobic007G176600--Sobic004G037000 Sobic004G086400 Sobic004G086400 Sobic007G176600--Sobic004G086400 Sobic007G155200 Sobic007G155200 Sobic007G176600--Sobic007G155200 Sobic001G447100--Sobic003G349700 Sobic001G447100--Sobic004G024200 Sobic001G447100--Sobic007G176600 Sobic008G111500 Sobic008G111500 Sobic001G447100--Sobic008G111500 Sobic007G074200 Sobic007G074200 Sobic001G447100--Sobic007G074200 Sobic001G100600 Sobic001G100600 Sobic001G447100--Sobic001G100600 Sobic001G477300 Sobic001G477300 Sobic001G447100--Sobic001G477300 Sobic009G131400 Sobic009G131400 Sobic001G447100--Sobic009G131400 Sobic003G041200 Sobic003G041200 Sobic001G447100--Sobic003G041200 Sobic003G349700--Sobic001G447100 Sobic001G387900 Sobic001G387900 Sobic003G349700--Sobic001G387900 Sobic001G108200 Sobic001G108200 Sobic003G349700--Sobic001G108200 Sobic003G349700--Sobic001G100600 Sobic001G308300 Sobic001G308300 Sobic003G349700--Sobic001G308300 Sobic002G336600 Sobic002G336600 Sobic003G349700--Sobic002G336600 Sobic003G349700--Sobic003G041200 Sobic004G141200 Sobic004G141200 Sobic003G349700--Sobic004G141200 Sobic003G369100 Sobic003G369100 Sobic003G349700--Sobic003G369100 Sobic003G116800 Sobic003G116800 Sobic006G207000--Sobic003G116800 Sobic006G207000--Sobic004G086400 Sobic006G207000--Sobic006G207100 Sobic006G207000--Sobic010G196600 Sobic002G339000 Sobic002G339000 Sobic006G207000--Sobic002G339000 Sobic003G148300 Sobic003G148300 Sobic006G207000--Sobic003G148300 Sobic001G425500 Sobic001G425500 Sobic006G207000--Sobic001G425500 Sobic006G207000--Sobic007G155200 Sobic004G004500 Sobic004G004500 Sobic006G207000--Sobic004G004500 Sobic006G207100--Sobic006G207000 Sobic006G207100--Sobic004G004500 Sobic006G207100--Sobic003G116800 Sobic006G207100--Sobic002G339000 Sobic006G207100--Sobic004G086400 Sobic006G207100--Sobic001G108200 Sobic007G036900 Sobic007G036900 Sobic006G207100--Sobic007G036900 Sobic001G256700 Sobic001G256700 Sobic006G207100--Sobic001G256700 Sobic006G207100--Sobic003G148300 Sobic004G024200--Sobic001G447100 Sobic004G024200--Sobic003G349700 Sobic004G024200--Sobic007G176600 Sobic004G024200--Sobic004G086400 Sobic004G024200--Sobic006G207100 Sobic004G024200--Sobic009G131400 Sobic004G146000 Sobic004G146000 Sobic004G024200--Sobic004G146000 Sobic004G024200--Sobic003G041200 Sobic004G024200--Sobic001G108200 Sobic009G194400 Sobic009G194400 Sobic010G196600--Sobic009G194400 Sobic010G196600--Sobic001G425500 Sobic004G109700 Sobic004G109700 Sobic010G196600--Sobic004G109700 Sobic004G283500 Sobic004G283500 Sobic010G196600--Sobic004G283500 Sobic002G388900 Sobic002G388900 Sobic010G196600--Sobic002G388900 Sobic003G323201 Sobic003G323201 Sobic010G196600--Sobic003G323201 Sobic008G187001 Sobic008G187001 Sobic010G196600--Sobic008G187001 Sobic001G425600 Sobic001G425600 Sobic010G196600--Sobic001G425600 Sobic004G109600 Sobic004G109600 Sobic010G196600--Sobic004G109600 Sobic004G037000--Sobic007G155200 Sobic002G361100 Sobic002G361100 Sobic004G037000--Sobic002G361100 Sobic010G084600 Sobic010G084600 Sobic004G037000--Sobic010G084600 Sobic002G184200 Sobic002G184200 Sobic004G037000--Sobic002G184200 Sobic010G084700 Sobic010G084700 Sobic004G037000--Sobic010G084700 Sobic009G224100 Sobic009G224100 Sobic004G037000--Sobic009G224100 Sobic004G221500 Sobic004G221500 Sobic004G037000--Sobic004G221500 Sobic004G037000--Sobic006G207000 Sobic004G037000--Sobic010G196600 Sobic004G086400--Sobic003G148300 Sobic004G108200 Sobic004G108200 Sobic004G086400--Sobic004G108200 Sobic004G086400--Sobic004G004500 Sobic010G212800 Sobic010G212800 Sobic004G086400--Sobic010G212800 Sobic004G086400--Sobic006G207000 Sobic007G006300 Sobic007G006300 Sobic004G086400--Sobic007G006300 Sobic002G234400 Sobic002G234400 Sobic004G086400--Sobic002G234400 Sobic004G086400--Sobic002G339000 Sobic009G189501 Sobic009G189501 Sobic004G086400--Sobic009G189501 Sobic007G155200--Sobic009G224100 Sobic007G155200--Sobic002G184200 Sobic005G045900 Sobic005G045900 Sobic007G155200--Sobic005G045900 Sobic002G140400 Sobic002G140400 Sobic007G155200--Sobic002G140400 Sobic007G155200--Sobic004G037000 Sobic007G155200--Sobic010G196600 Sobic004G228500 Sobic004G228500 Sobic007G155200--Sobic004G228500 Sobic003G349600 Sobic003G349600 Sobic007G155200--Sobic003G349600 Sobic002G139400 Sobic002G139400 Sobic007G155200--Sobic002G139400
Octagon: transcription factors


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