Gene annotation
Transcriptome id Sobic.003G325700.1
Synonym Sb03g037170
Functional annotation expressed protein
UniProt A0A1W0W029
Pfam -
Panther DB PTHR33133 PTHR33133:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G44860 : -
RAP-DB (Rice) LOC_Os01g58620.1 : expressed protein
MaizeGDB (Corn) Zm00025a027191 , Zm00025a039849
Brachypodium KQK10179
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G325700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G063500 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
2 Sobic.003G146400 anther-specific protein SF18 precursor, putative, expressed -
3 Sobic.010G196800 OsFBX436 - F-box domain containing protein, expressed -
4 Sobic.002G113500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@RALFL4 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
5 Sobic.003G063200 uncharacterized Cys-rich domain containing protein, putative, expressed -
6 Sobic.006G158200 lectin-like receptor kinase, putative, expressed -
7 Sobic.008G111500 membrane associated DUF588 domain containing protein, putative, expressed -
8 Sobic.004G247200 erwinia induced protein 2, putative, expressed -
9 Sobic.009G131400 basic 7S globulin precursor, putative, expressed -
10 Sobic.004G306300 expressed protein -
11 Sobic.001G154400 expp1 protein precursor, putative, expressed -
12 Sobic.001G204900 cystathionin beta synthase protein, putative, expressed -
13 Sobic.009G234000 expressed protein -
14 Sobic.002G051700 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
15 Sobic.004G259600 slowmo homolog, putative, expressed -
16 Sobic.001G130400 expressed protein -
17 Sobic.002G239200 zinc finger, C3HC4 type domain containing protein, expressed K16285: RING/U-box domain-containing protein
18 Sobic.004G117600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@WRKY39, expressed -
19 Sobic.003G403400 zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.007G074200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- -


Gene co-expression network
sample Sobic003G325700 Sobic003G325700 Sobic004G063500 Sobic004G063500 Sobic003G325700--Sobic004G063500 Sobic003G146400 Sobic003G146400 Sobic003G325700--Sobic003G146400 Sobic010G196800 Sobic010G196800 Sobic003G325700--Sobic010G196800 Sobic002G113500 Sobic002G113500 Sobic003G325700--Sobic002G113500 Sobic003G063200 Sobic003G063200 Sobic003G325700--Sobic003G063200 Sobic006G158200 Sobic006G158200 Sobic003G325700--Sobic006G158200 Sobic008G111500 Sobic008G111500 Sobic003G325700--Sobic008G111500 Sobic004G247200 Sobic004G247200 Sobic003G325700--Sobic004G247200 Sobic009G131400 Sobic009G131400 Sobic003G325700--Sobic009G131400 Sobic009G120100 Sobic009G120100 Sobic004G063500--Sobic009G120100 Sobic004G063500--Sobic003G325700 Sobic004G063500--Sobic003G063200 Sobic001G066700 Sobic001G066700 Sobic004G063500--Sobic001G066700 Sobic010G266300 Sobic010G266300 Sobic004G063500--Sobic010G266300 Sobic009G216800 Sobic009G216800 Sobic004G063500--Sobic009G216800 Sobic003G403400 Sobic003G403400 Sobic004G063500--Sobic003G403400 Sobic004G063500--Sobic002G113500 Sobic006G231700 Sobic006G231700 Sobic004G063500--Sobic006G231700 Sobic009G179500 Sobic009G179500 Sobic003G146400--Sobic009G179500 Sobic009G184000 Sobic009G184000 Sobic003G146400--Sobic009G184000 Sobic004G306300 Sobic004G306300 Sobic003G146400--Sobic004G306300 Sobic007G074200 Sobic007G074200 Sobic003G146400--Sobic007G074200 Sobic003G432700 Sobic003G432700 Sobic003G146400--Sobic003G432700 Sobic006G007900 Sobic006G007900 Sobic003G146400--Sobic006G007900 Sobic003G146400--Sobic006G158200 Sobic001G079300 Sobic001G079300 Sobic003G146400--Sobic001G079300 Sobic006G235100 Sobic006G235100 Sobic003G146400--Sobic006G235100 Sobic010G196800--Sobic003G325700 Sobic010G196800--Sobic009G131400 Sobic001G050900 Sobic001G050900 Sobic010G196800--Sobic001G050900 Sobic010G196800--Sobic003G146400 Sobic005G064200 Sobic005G064200 Sobic010G196800--Sobic005G064200 Sobic010G196800--Sobic008G111500 Sobic010G196800--Sobic009G216800 Sobic009G170800 Sobic009G170800 Sobic010G196800--Sobic009G170800 Sobic001G389900 Sobic001G389900 Sobic010G196800--Sobic001G389900 Sobic001G154400 Sobic001G154400 Sobic002G113500--Sobic001G154400 Sobic002G113500--Sobic003G325700 Sobic002G113500--Sobic004G063500 Sobic002G239200 Sobic002G239200 Sobic002G113500--Sobic002G239200 Sobic001G399300 Sobic001G399300 Sobic002G113500--Sobic001G399300 Sobic002G113500--Sobic003G146400 Sobic010G030900 Sobic010G030900 Sobic002G113500--Sobic010G030900 Sobic004G102900 Sobic004G102900 Sobic002G113500--Sobic004G102900 Sobic002G113500--Sobic009G216800 Sobic005G028700 Sobic005G028700 Sobic003G063200--Sobic005G028700 Sobic010G204600 Sobic010G204600 Sobic003G063200--Sobic010G204600 Sobic003G063200--Sobic004G247200 Sobic001G055600 Sobic001G055600 Sobic003G063200--Sobic001G055600 Sobic001G037000 Sobic001G037000 Sobic003G063200--Sobic001G037000 Sobic009G023200 Sobic009G023200 Sobic003G063200--Sobic009G023200 Sobic001G390300 Sobic001G390300 Sobic003G063200--Sobic001G390300 Sobic003G063200--Sobic004G306300 Sobic002G407900 Sobic002G407900 Sobic003G063200--Sobic002G407900 Sobic006G158266 Sobic006G158266 Sobic006G158200--Sobic006G158266 Sobic006G158200--Sobic003G146400 Sobic006G158200--Sobic004G306300 Sobic006G159600 Sobic006G159600 Sobic006G158200--Sobic006G159600 Sobic001G322200 Sobic001G322200 Sobic006G158200--Sobic001G322200 Sobic006G158200--Sobic001G399300 Sobic001G371900 Sobic001G371900 Sobic006G158200--Sobic001G371900 Sobic006G263600 Sobic006G263600 Sobic006G158200--Sobic006G263600 Sobic006G158200--Sobic001G055600 Sobic008G111500--Sobic007G074200 Sobic008G111500--Sobic009G131400 Sobic001G447100 Sobic001G447100 Sobic008G111500--Sobic001G447100 Sobic006G100200 Sobic006G100200 Sobic008G111500--Sobic006G100200 Sobic003G349700 Sobic003G349700 Sobic008G111500--Sobic003G349700 Sobic004G117600 Sobic004G117600 Sobic008G111500--Sobic004G117600 Sobic002G338250 Sobic002G338250 Sobic008G111500--Sobic002G338250 Sobic001G100600 Sobic001G100600 Sobic008G111500--Sobic001G100600 Sobic002G393600 Sobic002G393600 Sobic008G111500--Sobic002G393600 Sobic004G247200--Sobic003G063200 Sobic004G247200--Sobic005G028700 Sobic004G259600 Sobic004G259600 Sobic004G247200--Sobic004G259600 Sobic004G247200--Sobic001G055600 Sobic004G247200--Sobic010G204600 Sobic004G065500 Sobic004G065500 Sobic004G247200--Sobic004G065500 Sobic009G183300 Sobic009G183300 Sobic004G247200--Sobic009G183300 Sobic001G067601 Sobic001G067601 Sobic004G247200--Sobic001G067601 Sobic002G348100 Sobic002G348100 Sobic004G247200--Sobic002G348100 Sobic009G131400--Sobic008G111500 Sobic009G131400--Sobic007G074200 Sobic009G131400--Sobic001G447100 Sobic004G024200 Sobic004G024200 Sobic009G131400--Sobic004G024200 Sobic009G131400--Sobic003G349700 Sobic006G207100 Sobic006G207100 Sobic009G131400--Sobic006G207100 Sobic009G131400--Sobic003G146400 Sobic004G086400 Sobic004G086400 Sobic009G131400--Sobic004G086400 Sobic007G176600 Sobic007G176600 Sobic009G131400--Sobic007G176600
Octagon: transcription factors


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