Gene annotation
Transcriptome id Sobic.006G158200.1
Synonym Sb06g023510, RLK
Functional annotation lectin-like receptor kinase, putative, expressed
UniProt C5YCW1
Pfam PF00069 PF00139
Panther DB PTHR27007 PTHR27007:SF33
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G37710 : receptor lectin kinase
RAP-DB (Rice) LOC_Os04g44900.1 : lectin-like receptor kinase, putative, expressed
MaizeGDB (Corn) Zm00025a056576 , Zm00025a056577 , Zm00025a016193 , Zm00025a006801 , Zm00025a048486 , Zm00025a001674 , Zm00025a004289 , Zm00025a025717
Brachypodium KQJ83743 , KQJ96879 , KQJ96881 , KQK12404 , PNT68408 , KQK22464 , PNT61549 , PNT69125 , PNT61550
Barley HORVU5Hr1G114100.1 , HORVU2Hr1G091360.3 , HORVU2Hr1G091360.2 , HORVU2Hr1G091360.1 , HORVU6Hr1G060540.1 , HORVU5Hr1G114030.1 , HORVU5Hr1G114030.2 , HORVU5Hr1G114030.3 , HORVU5Hr1G114030.4 , HORVU1Hr1G037000.1 , HORVU1Hr1G037000.3 , HORVU1Hr1G037000.2 , HORVU1Hr1G037000.5 , HORVU1Hr1G037000.4 , HORVU5Hr1G098640.1 , HORVU5Hr1G098640.2
Wheat TraesCS5A02G484600 , TraesCS5A02G319400 , TraesCS5D02G416100 , TraesCS5B02G319800
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G158266 - -
2 Sobic.003G146400 anther-specific protein SF18 precursor, putative, expressed -
3 Sobic.004G306300 expressed protein -
4 Sobic.006G159600 cytochrome b561, putative, expressed K08360: cytochrome b-561
5 Sobic.001G322200 hydrolase, alpha/beta fold family protein, putative, expressed -
6 Sobic.001G399300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphotase protein, putative, expressed -
7 Sobic.001G371900 copper/zinc superoxide dismutase(PubMedID : 23915383)@copper/zinc superoxide dismutase, putative, expressed K04565: superoxide dismutase, Cu-Zn family
8 Sobic.006G263600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.001G055600 prenylated rab acceptor, putative, expressed -
10 Sobic.001G464900 "Ca ATPase, IIB type"(PubMedID : 22196357)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
11 Sobic.003G324400 Not investigated(PubMedID : 23766026)@Contribute to rice salt tolerance under a salt inducible abscisic acid 2 (ABA2) promoter(PubMedID : 28393269)@AP2 domain containing protein, expressed -
12 Sobic.002G356101 - -
13 Sobic.002G051700 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
14 Sobic.009G179500 expressed protein -
15 Sobic.001G459800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
16 Sobic.010G086200 GRAM domain containing protein, expressed -
17 Sobic.004G247200 erwinia induced protein 2, putative, expressed -
18 Sobic.006G194000 DUF581 domain containing protein, expressed -
19 Sobic.002G407900 copper/zinc superoxide dismutase, putative, expressed K04565: superoxide dismutase, Cu-Zn family
20 Sobic.001G405500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pyruvate decarboxylase isozyme 2, putative, expressed K01568: PDC, pyruvate decarboxylase


Gene co-expression network
sample Sobic006G158200 Sobic006G158200 Sobic006G158266 Sobic006G158266 Sobic006G158200--Sobic006G158266 Sobic003G146400 Sobic003G146400 Sobic006G158200--Sobic003G146400 Sobic004G306300 Sobic004G306300 Sobic006G158200--Sobic004G306300 Sobic006G159600 Sobic006G159600 Sobic006G158200--Sobic006G159600 Sobic001G322200 Sobic001G322200 Sobic006G158200--Sobic001G322200 Sobic001G399300 Sobic001G399300 Sobic006G158200--Sobic001G399300 Sobic001G371900 Sobic001G371900 Sobic006G158200--Sobic001G371900 Sobic006G263600 Sobic006G263600 Sobic006G158200--Sobic006G263600 Sobic001G055600 Sobic001G055600 Sobic006G158200--Sobic001G055600 Sobic006G158266--Sobic001G055600 Sobic003G265200 Sobic003G265200 Sobic006G158266--Sobic003G265200 Sobic006G158266--Sobic006G158200 Sobic002G356101 Sobic002G356101 Sobic006G158266--Sobic002G356101 Sobic009G074100 Sobic009G074100 Sobic006G158266--Sobic009G074100 Sobic006G158266--Sobic004G306300 Sobic006G157500 Sobic006G157500 Sobic006G158266--Sobic006G157500 Sobic009G184000 Sobic009G184000 Sobic006G158266--Sobic009G184000 Sobic007G074000 Sobic007G074000 Sobic006G158266--Sobic007G074000 Sobic009G179500 Sobic009G179500 Sobic003G146400--Sobic009G179500 Sobic003G146400--Sobic009G184000 Sobic003G146400--Sobic004G306300 Sobic007G074200 Sobic007G074200 Sobic003G146400--Sobic007G074200 Sobic003G432700 Sobic003G432700 Sobic003G146400--Sobic003G432700 Sobic006G007900 Sobic006G007900 Sobic003G146400--Sobic006G007900 Sobic003G146400--Sobic006G158200 Sobic001G079300 Sobic001G079300 Sobic003G146400--Sobic001G079300 Sobic006G235100 Sobic006G235100 Sobic003G146400--Sobic006G235100 Sobic004G065500 Sobic004G065500 Sobic004G306300--Sobic004G065500 Sobic001G459800 Sobic001G459800 Sobic004G306300--Sobic001G459800 Sobic003G393900 Sobic003G393900 Sobic004G306300--Sobic003G393900 Sobic001G138600 Sobic001G138600 Sobic004G306300--Sobic001G138600 Sobic003G369100 Sobic003G369100 Sobic004G306300--Sobic003G369100 Sobic004G321300 Sobic004G321300 Sobic004G306300--Sobic004G321300 Sobic006G267200 Sobic006G267200 Sobic004G306300--Sobic006G267200 Sobic004G141200 Sobic004G141200 Sobic004G306300--Sobic004G141200 Sobic004G306300--Sobic001G055600 Sobic006G137800 Sobic006G137800 Sobic006G159600--Sobic006G137800 Sobic002G348100 Sobic002G348100 Sobic006G159600--Sobic002G348100 Sobic003G125650 Sobic003G125650 Sobic006G159600--Sobic003G125650 Sobic006G067800 Sobic006G067800 Sobic006G159600--Sobic006G067800 Sobic006G159600--Sobic004G321300 Sobic008G025600 Sobic008G025600 Sobic006G159600--Sobic008G025600 Sobic007G197800 Sobic007G197800 Sobic006G159600--Sobic007G197800 Sobic009G159400 Sobic009G159400 Sobic006G159600--Sobic009G159400 Sobic001G464900 Sobic001G464900 Sobic006G159600--Sobic001G464900 Sobic009G248500 Sobic009G248500 Sobic001G322200--Sobic009G248500 Sobic004G341800 Sobic004G341800 Sobic001G322200--Sobic004G341800 Sobic009G027900 Sobic009G027900 Sobic001G322200--Sobic009G027900 Sobic001G267600 Sobic001G267600 Sobic001G322200--Sobic001G267600 Sobic003G228900 Sobic003G228900 Sobic001G322200--Sobic003G228900 Sobic002G189100 Sobic002G189100 Sobic001G322200--Sobic002G189100 Sobic004G041900 Sobic004G041900 Sobic001G322200--Sobic004G041900 Sobic003G049700 Sobic003G049700 Sobic001G322200--Sobic003G049700 Sobic001G322200--Sobic004G065500 Sobic001G042500 Sobic001G042500 Sobic001G399300--Sobic001G042500 Sobic001G399300--Sobic006G158200 Sobic007G195800 Sobic007G195800 Sobic001G399300--Sobic007G195800 Sobic001G399300--Sobic006G159600 Sobic001G429000 Sobic001G429000 Sobic001G399300--Sobic001G429000 Sobic001G399300--Sobic003G146400 Sobic001G399300--Sobic002G348100 Sobic009G216800 Sobic009G216800 Sobic001G399300--Sobic009G216800 Sobic002G113500 Sobic002G113500 Sobic001G399300--Sobic002G113500 Sobic002G407900 Sobic002G407900 Sobic001G371900--Sobic002G407900 Sobic001G371900--Sobic006G137800 Sobic003G072300 Sobic003G072300 Sobic001G371900--Sobic003G072300 Sobic001G371900--Sobic007G195800 Sobic001G371900--Sobic004G065500 Sobic003G357300 Sobic003G357300 Sobic001G371900--Sobic003G357300 Sobic002G389400 Sobic002G389400 Sobic001G371900--Sobic002G389400 Sobic001G371900--Sobic006G159600 Sobic001G371900--Sobic004G306300 Sobic001G259700 Sobic001G259700 Sobic006G263600--Sobic001G259700 Sobic004G169200 Sobic004G169200 Sobic006G263600--Sobic004G169200 Sobic009G247900 Sobic009G247900 Sobic006G263600--Sobic009G247900 Sobic009G036000 Sobic009G036000 Sobic006G263600--Sobic009G036000 Sobic001G383700 Sobic001G383700 Sobic006G263600--Sobic001G383700 Sobic003G324400 Sobic003G324400 Sobic006G263600--Sobic003G324400 Sobic007G213800 Sobic007G213800 Sobic006G263600--Sobic007G213800 Sobic006G263600--Sobic001G079300 Sobic002G282300 Sobic002G282300 Sobic006G263600--Sobic002G282300 Sobic001G390300 Sobic001G390300 Sobic001G055600--Sobic001G390300 Sobic001G055600--Sobic007G074000 Sobic001G055600--Sobic002G407900 Sobic001G055600--Sobic009G159400 Sobic001G481100 Sobic001G481100 Sobic001G055600--Sobic001G481100 Sobic001G055600--Sobic004G065500 Sobic002G336600 Sobic002G336600 Sobic001G055600--Sobic002G336600 Sobic001G055600--Sobic003G228900 Sobic001G055600--Sobic009G247900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.