Gene annotation
Transcriptome id Sobic.002G051700.1
Synonym Sb02g004350
Functional annotation transmembrane BAX inhibitor motif-containing protein, putative, expressed
UniProt C5XB01
Pfam PF01027
Panther DB PTHR23291 PTHR23291:SF48
NCBI CDD KOG2322; N-methyl-D-aspartate receptor glutamate-binding subunit
KEGG Orthology K06890; uncharacterized protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G03070 : Bax inhibitor-1 family protein
RAP-DB (Rice) LOC_Os07g08070.1 : transmembrane BAX inhibitor motif-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a045157 , Zm00025a016577 , Zm00025a008556 , Zm00025a033903
Brachypodium KQK13246 , KQK12715 , KQK20615
Barley HORVU5Hr1G105760.4 , HORVU5Hr1G105760.3 , HORVU3Hr1G105430.1 , HORVU3Hr1G105430.2 , HORVU4Hr1G015460.1 , HORVU7Hr1G051300.1 , HORVU3Hr1G105470.2 , HORVU3Hr1G105470.3 , HORVU3Hr1G105470.4 , HORVU3Hr1G105460.2 , HORVU3Hr1G105460.1
Wheat TraesCS3B02G525800 , TraesCS3D02G476300 , TraesCS3A02G481400 , TraesCS5D02G393600 , TraesCS3A02G480500 , TraesCS3D02G476100 , TraesCS3B02G525100 , TraesCS5A02G437800 , TraesCS3B02G525200 , TraesCS3D02G475300 , TraesCS5B02G440600 , TraesCS3B02G526300 , TraesCS5D02G445000 , TraesCS3A02G481200 , TraesCS5A02G384100 , TraesCS2B02G463300 , TraesCS3D02G476000 , TraesCS3B02G526500 , TraesCS3D02G476400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G407900 copper/zinc superoxide dismutase, putative, expressed K04565: superoxide dismutase, Cu-Zn family
2 Sobic.006G158200 lectin-like receptor kinase, putative, expressed -
3 Sobic.006G159600 cytochrome b561, putative, expressed K08360: cytochrome b-561
4 Sobic.004G063500 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
5 Sobic.001G055600 prenylated rab acceptor, putative, expressed -
6 Sobic.003G063200 uncharacterized Cys-rich domain containing protein, putative, expressed -
7 Sobic.004G259600 slowmo homolog, putative, expressed -
8 Sobic.002G348100 40S ribosomal protein S13, putative, expressed K02953: RP-S13e, small subunit ribosomal protein S13e
9 Sobic.003G325700 expressed protein -
10 Sobic.005G028700 peflin, putative, expressed K13448: calcium-binding protein CML
11 Sobic.001G371900 copper/zinc superoxide dismutase(PubMedID : 23915383)@copper/zinc superoxide dismutase, putative, expressed K04565: superoxide dismutase, Cu-Zn family
12 Sobic.003G073900 expressed protein -
13 Sobic.004G306300 expressed protein -
14 Sobic.006G274400 harpin-induced protein 1 domain containing protein, expressed -
15 Sobic.003G125650 - K02183: calmodulin
16 Sobic.003G146400 anther-specific protein SF18 precursor, putative, expressed -
17 Sobic.003G403400 zinc finger, C3HC4 type domain containing protein, expressed -
18 Sobic.001G399300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphotase protein, putative, expressed -
19 Sobic.003G306100 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
20 Sobic.001G018500 expressed protein K17784: MINOS1, mitochondrial inner membrane organizing system protein 1


Gene co-expression network
sample Sobic002G051700 Sobic002G051700 Sobic002G407900 Sobic002G407900 Sobic002G051700--Sobic002G407900 Sobic006G158200 Sobic006G158200 Sobic002G051700--Sobic006G158200 Sobic006G159600 Sobic006G159600 Sobic002G051700--Sobic006G159600 Sobic004G063500 Sobic004G063500 Sobic002G051700--Sobic004G063500 Sobic001G055600 Sobic001G055600 Sobic002G051700--Sobic001G055600 Sobic003G063200 Sobic003G063200 Sobic002G051700--Sobic003G063200 Sobic004G259600 Sobic004G259600 Sobic002G051700--Sobic004G259600 Sobic002G348100 Sobic002G348100 Sobic002G051700--Sobic002G348100 Sobic003G325700 Sobic003G325700 Sobic002G051700--Sobic003G325700 Sobic002G407900--Sobic001G055600 Sobic003G125650 Sobic003G125650 Sobic002G407900--Sobic003G125650 Sobic001G390300 Sobic001G390300 Sobic002G407900--Sobic001G390300 Sobic001G402050 Sobic001G402050 Sobic002G407900--Sobic001G402050 Sobic001G016400 Sobic001G016400 Sobic002G407900--Sobic001G016400 Sobic002G336600 Sobic002G336600 Sobic002G407900--Sobic002G336600 Sobic001G046100 Sobic001G046100 Sobic002G407900--Sobic001G046100 Sobic010G204500 Sobic010G204500 Sobic002G407900--Sobic010G204500 Sobic001G477600 Sobic001G477600 Sobic002G407900--Sobic001G477600 Sobic006G158266 Sobic006G158266 Sobic006G158200--Sobic006G158266 Sobic003G146400 Sobic003G146400 Sobic006G158200--Sobic003G146400 Sobic004G306300 Sobic004G306300 Sobic006G158200--Sobic004G306300 Sobic006G158200--Sobic006G159600 Sobic001G322200 Sobic001G322200 Sobic006G158200--Sobic001G322200 Sobic001G399300 Sobic001G399300 Sobic006G158200--Sobic001G399300 Sobic001G371900 Sobic001G371900 Sobic006G158200--Sobic001G371900 Sobic006G263600 Sobic006G263600 Sobic006G158200--Sobic006G263600 Sobic006G158200--Sobic001G055600 Sobic006G137800 Sobic006G137800 Sobic006G159600--Sobic006G137800 Sobic006G159600--Sobic002G348100 Sobic006G159600--Sobic003G125650 Sobic006G067800 Sobic006G067800 Sobic006G159600--Sobic006G067800 Sobic004G321300 Sobic004G321300 Sobic006G159600--Sobic004G321300 Sobic008G025600 Sobic008G025600 Sobic006G159600--Sobic008G025600 Sobic007G197800 Sobic007G197800 Sobic006G159600--Sobic007G197800 Sobic009G159400 Sobic009G159400 Sobic006G159600--Sobic009G159400 Sobic001G464900 Sobic001G464900 Sobic006G159600--Sobic001G464900 Sobic009G120100 Sobic009G120100 Sobic004G063500--Sobic009G120100 Sobic004G063500--Sobic003G325700 Sobic004G063500--Sobic003G063200 Sobic001G066700 Sobic001G066700 Sobic004G063500--Sobic001G066700 Sobic010G266300 Sobic010G266300 Sobic004G063500--Sobic010G266300 Sobic009G216800 Sobic009G216800 Sobic004G063500--Sobic009G216800 Sobic003G403400 Sobic003G403400 Sobic004G063500--Sobic003G403400 Sobic002G113500 Sobic002G113500 Sobic004G063500--Sobic002G113500 Sobic006G231700 Sobic006G231700 Sobic004G063500--Sobic006G231700 Sobic001G055600--Sobic001G390300 Sobic007G074000 Sobic007G074000 Sobic001G055600--Sobic007G074000 Sobic001G055600--Sobic002G407900 Sobic001G055600--Sobic009G159400 Sobic001G481100 Sobic001G481100 Sobic001G055600--Sobic001G481100 Sobic004G065500 Sobic004G065500 Sobic001G055600--Sobic004G065500 Sobic001G055600--Sobic002G336600 Sobic003G228900 Sobic003G228900 Sobic001G055600--Sobic003G228900 Sobic009G247900 Sobic009G247900 Sobic001G055600--Sobic009G247900 Sobic005G028700 Sobic005G028700 Sobic003G063200--Sobic005G028700 Sobic010G204600 Sobic010G204600 Sobic003G063200--Sobic010G204600 Sobic004G247200 Sobic004G247200 Sobic003G063200--Sobic004G247200 Sobic003G063200--Sobic001G055600 Sobic001G037000 Sobic001G037000 Sobic003G063200--Sobic001G037000 Sobic009G023200 Sobic009G023200 Sobic003G063200--Sobic009G023200 Sobic003G063200--Sobic001G390300 Sobic003G063200--Sobic004G306300 Sobic003G063200--Sobic002G407900 Sobic004G259600--Sobic004G247200 Sobic004G259600--Sobic002G348100 Sobic004G259600--Sobic003G063200 Sobic005G168100 Sobic005G168100 Sobic004G259600--Sobic005G168100 Sobic004G259600--Sobic001G055600 Sobic009G232900 Sobic009G232900 Sobic004G259600--Sobic009G232900 Sobic002G372400 Sobic002G372400 Sobic004G259600--Sobic002G372400 Sobic004G259600--Sobic010G204600 Sobic004G259600--Sobic005G028700 Sobic002G348100--Sobic002G372400 Sobic001G175300 Sobic001G175300 Sobic002G348100--Sobic001G175300 Sobic003G078200 Sobic003G078200 Sobic002G348100--Sobic003G078200 Sobic002G348100--Sobic001G055600 Sobic009G242300 Sobic009G242300 Sobic002G348100--Sobic009G242300 Sobic002G348100--Sobic006G137800 Sobic009G054800 Sobic009G054800 Sobic002G348100--Sobic009G054800 Sobic004G198400 Sobic004G198400 Sobic002G348100--Sobic004G198400 Sobic004G055100 Sobic004G055100 Sobic002G348100--Sobic004G055100 Sobic003G325700--Sobic004G063500 Sobic003G325700--Sobic003G146400 Sobic010G196800 Sobic010G196800 Sobic003G325700--Sobic010G196800 Sobic003G325700--Sobic002G113500 Sobic003G325700--Sobic003G063200 Sobic003G325700--Sobic006G158200 Sobic008G111500 Sobic008G111500 Sobic003G325700--Sobic008G111500 Sobic003G325700--Sobic004G247200 Sobic009G131400 Sobic009G131400 Sobic003G325700--Sobic009G131400
Octagon: transcription factors


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