Gene annotation
Transcriptome id Sobic.003G073900.1
Synonym Sb03g006230
Functional annotation expressed protein
UniProt C5XQ20
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G19240 : -
RAP-DB (Rice) LOC_Os01g05140.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G115000 LSM domain containing protein, expressed K11087: SNRPD1, small nuclear ribonucleoprotein D1
2 Sobic.003G018600 LSM domain containing protein, expressed K11097: SNRPE, small nuclear ribonucleoprotein E
3 Sobic.010G054200 peptidase, T1 family, putative, expressed K02728: 20S proteasome subunit alpha 3
4 Sobic.002G286900 ribosomal protein L14, putative, expressed K02875: RP-L14e, large subunit ribosomal protein L14e
5 Sobic.005G110800 - -
6 Sobic.003G150000 split hand/foot malformation type 1, putative, expressed K10881: SHFM1, DSS1, 26 proteasome complex subunit DSS1
7 Sobic.001G226500 60S ribosomal protein L21-2, putative, expressed K02889: RP-L21e, large subunit ribosomal protein L21e
8 Sobic.003G249700 60S ribosomal protein L18a, putative, expressed K02882: RP-L18Ae, large subunit ribosomal protein L18Ae
9 Sobic.001G225700 ribosomal protein, putative, expressed K02894: RP-L23e, large subunit ribosomal protein L23e
10 Sobic.006G081100 40S ribosomal protein S10, putative, expressed K02947: RP-S10e, small subunit ribosomal protein S10e
11 Sobic.003G125650 - K02183: calmodulin
12 Sobic.006G149200 LSM domain containing protein, expressed K11096: SNRPD2, small nuclear ribonucleoprotein D2
13 Sobic.001G130301 - K02971: RP-S21e, small subunit ribosomal protein S21e
14 Sobic.002G379500 40S ribosomal protein S6, putative, expressed K02991: RP-S6e, small subunit ribosomal protein S6e
15 Sobic.009G050300 60S ribosomal protein L18-3, putative, expressed K02883: RP-L18e, large subunit ribosomal protein L18e
16 Sobic.005G019700 ribosomal protein, putative, expressed K02960: RP-S16e, small subunit ribosomal protein S16e
17 Sobic.001G014500 DNA-directed RNA polymerases I, II, and III subunit RPABC3, putative, expressed K03016: RPB8, DNA-directed RNA polymerases I, II, and III subunit RPABC3
18 Sobic.001G172000 expressed protein -
19 Sobic.009G173500 40S ribosomal protein S26, putative, expressed K02976: RP-S26e, small subunit ribosomal protein S26e
20 Sobic.002G081600 ribosomal protein L7Ae, putative, expressed K02951: RP-S12e, small subunit ribosomal protein S12e


Gene co-expression network
sample Sobic003G073900 Sobic003G073900 Sobic006G115000 Sobic006G115000 Sobic003G073900--Sobic006G115000 Sobic003G018600 Sobic003G018600 Sobic003G073900--Sobic003G018600 Sobic010G054200 Sobic010G054200 Sobic003G073900--Sobic010G054200 Sobic002G286900 Sobic002G286900 Sobic003G073900--Sobic002G286900 Sobic005G110800 Sobic005G110800 Sobic003G073900--Sobic005G110800 Sobic003G150000 Sobic003G150000 Sobic003G073900--Sobic003G150000 Sobic001G226500 Sobic001G226500 Sobic003G073900--Sobic001G226500 Sobic003G249700 Sobic003G249700 Sobic003G073900--Sobic003G249700 Sobic001G225700 Sobic001G225700 Sobic003G073900--Sobic001G225700 Sobic006G115000--Sobic003G018600 Sobic006G115000--Sobic002G286900 Sobic010G023900 Sobic010G023900 Sobic006G115000--Sobic010G023900 Sobic009G233400 Sobic009G233400 Sobic006G115000--Sobic009G233400 Sobic006G115000--Sobic003G249700 Sobic010G069400 Sobic010G069400 Sobic006G115000--Sobic010G069400 Sobic006G137100 Sobic006G137100 Sobic006G115000--Sobic006G137100 Sobic003G387900 Sobic003G387900 Sobic006G115000--Sobic003G387900 Sobic002G331300 Sobic002G331300 Sobic006G115000--Sobic002G331300 Sobic003G018600--Sobic002G286900 Sobic003G018600--Sobic006G115000 Sobic009G166500 Sobic009G166500 Sobic003G018600--Sobic009G166500 Sobic001G377800 Sobic001G377800 Sobic003G018600--Sobic001G377800 Sobic003G018600--Sobic005G110800 Sobic009G050300 Sobic009G050300 Sobic003G018600--Sobic009G050300 Sobic003G018600--Sobic006G137100 Sobic009G163800 Sobic009G163800 Sobic003G018600--Sobic009G163800 Sobic003G018600--Sobic003G249700 Sobic006G081100 Sobic006G081100 Sobic010G054200--Sobic006G081100 Sobic010G054200--Sobic003G249700 Sobic001G058900 Sobic001G058900 Sobic010G054200--Sobic001G058900 Sobic009G223300 Sobic009G223300 Sobic010G054200--Sobic009G223300 Sobic003G129800 Sobic003G129800 Sobic010G054200--Sobic003G129800 Sobic010G054200--Sobic001G225700 Sobic010G054200--Sobic009G233400 Sobic010G054200--Sobic003G150000 Sobic002G372400 Sobic002G372400 Sobic010G054200--Sobic002G372400 Sobic002G286900--Sobic006G137100 Sobic008G108601 Sobic008G108601 Sobic002G286900--Sobic008G108601 Sobic004G008400 Sobic004G008400 Sobic002G286900--Sobic004G008400 Sobic002G286900--Sobic009G050300 Sobic002G286900--Sobic001G226500 Sobic001G403500 Sobic001G403500 Sobic002G286900--Sobic001G403500 Sobic002G286900--Sobic003G249700 Sobic002G286900--Sobic005G110800 Sobic007G178600 Sobic007G178600 Sobic002G286900--Sobic007G178600 Sobic005G110800--Sobic009G166500 Sobic005G110800--Sobic002G286900 Sobic001G493001 Sobic001G493001 Sobic005G110800--Sobic001G493001 Sobic002G081600 Sobic002G081600 Sobic005G110800--Sobic002G081600 Sobic005G110800--Sobic009G050300 Sobic005G110800--Sobic004G008400 Sobic005G110800--Sobic009G163800 Sobic003G346600 Sobic003G346600 Sobic005G110800--Sobic003G346600 Sobic001G130301 Sobic001G130301 Sobic005G110800--Sobic001G130301 Sobic003G150000--Sobic005G110800 Sobic010G204500 Sobic010G204500 Sobic003G150000--Sobic010G204500 Sobic003G150000--Sobic003G249700 Sobic003G150000--Sobic001G493001 Sobic003G150000--Sobic001G403500 Sobic001G054900 Sobic001G054900 Sobic003G150000--Sobic001G054900 Sobic003G150000--Sobic009G050300 Sobic005G019700 Sobic005G019700 Sobic003G150000--Sobic005G019700 Sobic003G150000--Sobic009G163800 Sobic001G226500--Sobic003G249700 Sobic007G019400 Sobic007G019400 Sobic001G226500--Sobic007G019400 Sobic009G076400 Sobic009G076400 Sobic001G226500--Sobic009G076400 Sobic001G226500--Sobic004G008400 Sobic001G226500--Sobic002G286900 Sobic007G053300 Sobic007G053300 Sobic001G226500--Sobic007G053300 Sobic006G213000 Sobic006G213000 Sobic001G226500--Sobic006G213000 Sobic001G226500--Sobic001G130301 Sobic009G054800 Sobic009G054800 Sobic001G226500--Sobic009G054800 Sobic003G249700--Sobic007G019400 Sobic003G249700--Sobic001G226500 Sobic001G039400 Sobic001G039400 Sobic003G249700--Sobic001G039400 Sobic003G249700--Sobic003G387900 Sobic002G047600 Sobic002G047600 Sobic003G249700--Sobic002G047600 Sobic003G249700--Sobic007G178600 Sobic003G249700--Sobic004G008400 Sobic001G085400 Sobic001G085400 Sobic003G249700--Sobic001G085400 Sobic003G109600 Sobic003G109600 Sobic003G249700--Sobic003G109600 Sobic001G225700--Sobic003G249700 Sobic001G225700--Sobic006G081100 Sobic001G225700--Sobic008G108601 Sobic001G225700--Sobic007G178600 Sobic001G225700--Sobic002G047600 Sobic001G225700--Sobic002G286900 Sobic002G049300 Sobic002G049300 Sobic001G225700--Sobic002G049300 Sobic010G251600 Sobic010G251600 Sobic001G225700--Sobic010G251600 Sobic002G115000 Sobic002G115000 Sobic001G225700--Sobic002G115000
Octagon: transcription factors


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