Gene annotation
Transcriptome id Sobic.006G274400.1
Synonym Sb06g033580
Functional annotation harpin-induced protein 1 domain containing protein, expressed
UniProt C5YAZ6
Pfam PF03168
Panther DB PTHR31415 PTHR31415:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G44220 : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
RAP-DB (Rice) LOC_Os04g58860.1 : harpin-induced protein 1 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a057434
Brachypodium KQJ85369
Barley HORVU4Hr1G021190.1 , HORVU2Hr1G123370.2 , HORVU2Hr1G123370.1
Wheat -
Populus -


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cDNA sequences
Sobic.006G274400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G070298 Cell wall invertase enzyme activity(PubMedID : 17293002) K01193: INV, beta-fructofuranosidase
2 Sobic.006G159600 cytochrome b561, putative, expressed K08360: cytochrome b-561
3 Sobic.002G385400 ORC6 - Putative origin recognition complex subunit 6, expressed K02608: origin recognition complex subunit 6
4 Sobic.001G464900 "Ca ATPase, IIB type"(PubMedID : 22196357)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
5 Sobic.002G051700 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
6 Sobic.001G399300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphotase protein, putative, expressed -
7 Sobic.001G162800 expressed protein -
8 Sobic.001G399900 COBRA-like protein 7 precursor, putative, expressed -
9 Sobic.009G242700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsCML14 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
10 Sobic.006G158200 lectin-like receptor kinase, putative, expressed -
11 Sobic.001G322200 hydrolase, alpha/beta fold family protein, putative, expressed -
12 Sobic.001G189000 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.003G232400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
14 Sobic.007G176800 acyl carrier protein, putative, expressed -
15 Sobic.009G173500 40S ribosomal protein S26, putative, expressed K02976: RP-S26e, small subunit ribosomal protein S26e
16 Sobic.003G125650 - K02183: calmodulin
17 Sobic.004G238700 CSLA6 - cellulose synthase-like family A@ mannan synthase, expressed K13680: beta-mannan synthase
18 Sobic.010G054200 peptidase, T1 family, putative, expressed K02728: 20S proteasome subunit alpha 3
19 Sobic.003G279100 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
20 Sobic.006G115000 LSM domain containing protein, expressed K11087: SNRPD1, small nuclear ribonucleoprotein D1


Gene co-expression network
sample Sobic006G274400 Sobic006G274400 Sobic006G070298 Sobic006G070298 Sobic006G274400--Sobic006G070298 Sobic006G159600 Sobic006G159600 Sobic006G274400--Sobic006G159600 Sobic002G385400 Sobic002G385400 Sobic006G274400--Sobic002G385400 Sobic001G464900 Sobic001G464900 Sobic006G274400--Sobic001G464900 Sobic002G051700 Sobic002G051700 Sobic006G274400--Sobic002G051700 Sobic001G399300 Sobic001G399300 Sobic006G274400--Sobic001G399300 Sobic001G162800 Sobic001G162800 Sobic006G274400--Sobic001G162800 Sobic001G399900 Sobic001G399900 Sobic006G274400--Sobic001G399900 Sobic009G242700 Sobic009G242700 Sobic006G274400--Sobic009G242700 Sobic006G070298--Sobic006G274400 Sobic002G359700 Sobic002G359700 Sobic006G070298--Sobic002G359700 Sobic006G070298--Sobic002G051700 Sobic001G189000 Sobic001G189000 Sobic006G070298--Sobic001G189000 Sobic006G070298--Sobic009G242700 Sobic004G063500 Sobic004G063500 Sobic006G070298--Sobic004G063500 Sobic005G064200 Sobic005G064200 Sobic006G070298--Sobic005G064200 Sobic010G196800 Sobic010G196800 Sobic006G070298--Sobic010G196800 Sobic006G070298--Sobic001G162800 Sobic006G137800 Sobic006G137800 Sobic006G159600--Sobic006G137800 Sobic002G348100 Sobic002G348100 Sobic006G159600--Sobic002G348100 Sobic003G125650 Sobic003G125650 Sobic006G159600--Sobic003G125650 Sobic006G067800 Sobic006G067800 Sobic006G159600--Sobic006G067800 Sobic004G321300 Sobic004G321300 Sobic006G159600--Sobic004G321300 Sobic008G025600 Sobic008G025600 Sobic006G159600--Sobic008G025600 Sobic007G197800 Sobic007G197800 Sobic006G159600--Sobic007G197800 Sobic009G159400 Sobic009G159400 Sobic006G159600--Sobic009G159400 Sobic006G159600--Sobic001G464900 Sobic004G217450 Sobic004G217450 Sobic002G385400--Sobic004G217450 Sobic010G023900 Sobic010G023900 Sobic002G385400--Sobic010G023900 Sobic002G258300 Sobic002G258300 Sobic002G385400--Sobic002G258300 Sobic004G342400 Sobic004G342400 Sobic002G385400--Sobic004G342400 Sobic003G084300 Sobic003G084300 Sobic002G385400--Sobic003G084300 Sobic005G080900 Sobic005G080900 Sobic002G385400--Sobic005G080900 Sobic003G034600 Sobic003G034600 Sobic002G385400--Sobic003G034600 Sobic004G274900 Sobic004G274900 Sobic002G385400--Sobic004G274900 Sobic006G115000 Sobic006G115000 Sobic002G385400--Sobic006G115000 Sobic009G248500 Sobic009G248500 Sobic001G464900--Sobic009G248500 Sobic001G322200 Sobic001G322200 Sobic001G464900--Sobic001G322200 Sobic009G027900 Sobic009G027900 Sobic001G464900--Sobic009G027900 Sobic001G464900--Sobic006G159600 Sobic005G228900 Sobic005G228900 Sobic001G464900--Sobic005G228900 Sobic001G173300 Sobic001G173300 Sobic001G464900--Sobic001G173300 Sobic007G198100 Sobic007G198100 Sobic001G464900--Sobic007G198100 Sobic002G356101 Sobic002G356101 Sobic001G464900--Sobic002G356101 Sobic010G065900 Sobic010G065900 Sobic001G464900--Sobic010G065900 Sobic002G407900 Sobic002G407900 Sobic002G051700--Sobic002G407900 Sobic006G158200 Sobic006G158200 Sobic002G051700--Sobic006G158200 Sobic002G051700--Sobic006G159600 Sobic002G051700--Sobic004G063500 Sobic001G055600 Sobic001G055600 Sobic002G051700--Sobic001G055600 Sobic003G063200 Sobic003G063200 Sobic002G051700--Sobic003G063200 Sobic004G259600 Sobic004G259600 Sobic002G051700--Sobic004G259600 Sobic002G051700--Sobic002G348100 Sobic003G325700 Sobic003G325700 Sobic002G051700--Sobic003G325700 Sobic001G042500 Sobic001G042500 Sobic001G399300--Sobic001G042500 Sobic001G399300--Sobic006G158200 Sobic007G195800 Sobic007G195800 Sobic001G399300--Sobic007G195800 Sobic001G399300--Sobic006G159600 Sobic001G429000 Sobic001G429000 Sobic001G399300--Sobic001G429000 Sobic003G146400 Sobic003G146400 Sobic001G399300--Sobic003G146400 Sobic001G399300--Sobic002G348100 Sobic009G216800 Sobic009G216800 Sobic001G399300--Sobic009G216800 Sobic002G113500 Sobic002G113500 Sobic001G399300--Sobic002G113500 Sobic001G347901 Sobic001G347901 Sobic001G162800--Sobic001G347901 Sobic009G233400 Sobic009G233400 Sobic001G162800--Sobic009G233400 Sobic006G108600 Sobic006G108600 Sobic001G162800--Sobic006G108600 Sobic006G013900 Sobic006G013900 Sobic001G162800--Sobic006G013900 Sobic002G054000 Sobic002G054000 Sobic001G162800--Sobic002G054000 Sobic009G173500 Sobic009G173500 Sobic001G162800--Sobic009G173500 Sobic008G135000 Sobic008G135000 Sobic001G162800--Sobic008G135000 Sobic010G076400 Sobic010G076400 Sobic001G162800--Sobic010G076400 Sobic001G162800--Sobic004G342400 Sobic001G399900--Sobic009G242700 Sobic001G138200 Sobic001G138200 Sobic001G399900--Sobic001G138200 Sobic002G418000 Sobic002G418000 Sobic001G399900--Sobic002G418000 Sobic001G399900--Sobic001G322200 Sobic001G399900--Sobic006G274400 Sobic004G246600 Sobic004G246600 Sobic001G399900--Sobic004G246600 Sobic004G286800 Sobic004G286800 Sobic001G399900--Sobic004G286800 Sobic001G219200 Sobic001G219200 Sobic001G399900--Sobic001G219200 Sobic001G399900--Sobic006G158200 Sobic009G242700--Sobic001G399900 Sobic001G321800 Sobic001G321800 Sobic009G242700--Sobic001G321800 Sobic009G242700--Sobic006G274400 Sobic009G242700--Sobic006G158200 Sobic009G242700--Sobic001G138200 Sobic009G242700--Sobic002G418000 Sobic006G205600 Sobic006G205600 Sobic009G242700--Sobic006G205600 Sobic009G242700--Sobic006G070298 Sobic010G234000 Sobic010G234000 Sobic009G242700--Sobic010G234000
Octagon: transcription factors


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