Gene annotation
Transcriptome id Sobic.004G238700.1
Synonym Sb04g028070, CSLA09, RAT4, ATCSLA9, CSLA9, ATCSLA09
Functional annotation CSLA6 - cellulose synthase-like family A
mannan synthase, expressed
UniProt A0A194YSG0
Pfam PF13632
Panther DB PTHR32044 PTHR32044:SF18
NCBI CDD -
KEGG Orthology K13680; beta-mannan synthase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G03760 : Nucleotide-diphospho-sugar transferases superfamily protein
RAP-DB (Rice) LOC_Os02g51060.1 : CSLA6 - cellulose synthase-like family A; mannan synthase, expressed
MaizeGDB (Corn) Zm00025a051489 , Zm00025a022027 , Zm00025a005925
Brachypodium KQK17607 , KQK01951 , KQJ96611
Barley HORVU3Hr1G109930.20 , HORVU3Hr1G109930.21 , HORVU3Hr1G109930.22 , HORVU3Hr1G109930.19 , HORVU3Hr1G109930.18 , HORVU3Hr1G109930.14 , HORVU3Hr1G109930.17 , HORVU3Hr1G109930.16 , HORVU3Hr1G109930.11 , HORVU3Hr1G109930.10 , HORVU3Hr1G109930.13 , HORVU3Hr1G109930.12 , HORVU3Hr1G002660.9 , HORVU3Hr1G002660.8 , HORVU3Hr1G002660.3 , HORVU3Hr1G002660.2 , HORVU3Hr1G002660.1 , HORVU3Hr1G002660.7 , HORVU3Hr1G002660.6 , HORVU3Hr1G002660.5 , HORVU3Hr1G002660.4 , HORVU3Hr1G109930.3 , HORVU3Hr1G109930.4 , HORVU3Hr1G109930.6 , HORVU3Hr1G109930.9 , HORVU3Hr1G109930.8 , HORVU3Hr1G107340.4 , HORVU3Hr1G107340.5 , HORVU3Hr1G107340.6 , HORVU3Hr1G109930.2 , HORVU3Hr1G109930.5 , HORVU3Hr1G107340.1 , HORVU3Hr1G107340.2 , HORVU3Hr1G107340.3
Wheat TraesCS3B02G540800 , TraesCS3A02G019200 , TraesCS6B02G135100 , TraesCS3D02G027600 , TraesCS3D02G027600 , TraesCS3D02G485600 , TraesCS3D02G485600 , TraesCS3D02G485600 , TraesCS3B02G054500 , TraesCS3B02G558400 , TraesCS3B02G558400 , TraesCS3D02G504200 , TraesCS6D02G094300 , TraesCS6A02G105800
Populus -


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cDNA sequences
Sobic.004G238700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G230000 monocopper oxidase, putative, expressed -
2 Sobic.001G439400 glycosyl hydrolase family 10 protein, putative, expressed -
3 Sobic.007G176800 acyl carrier protein, putative, expressed -
4 Sobic.001G142000 deoxyuridine 5-triphosphate nucleotidohydrolase, putative, expressed K01520: dut, dUTP pyrophosphatase
5 Sobic.001G456500 RPA1B - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
6 Sobic.006G116500 expressed protein -
7 Sobic.010G204700 LTPL129 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.002G258300 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.009G227600 aspartyl protease family protein, putative, expressed -
10 Sobic.003G153600 GDSL-like lipase/acylhydrolase, putative, expressed -
11 Sobic.002G385400 ORC6 - Putative origin recognition complex subunit 6, expressed K02608: origin recognition complex subunit 6
12 Sobic.004G355500 RPA2A - Putative single-stranded DNA binding complex subunit 2, expressed K10739: RFA2, replication factor A2
13 Sobic.001G169800 cyclin, putative, expressed K06627: cyclin-A
14 Sobic.006G235600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@beta-D-xylosidase, putative, expressed K15920: xylan 1,4-beta-xylosidase
15 Sobic.001G146900 expressed protein -
16 Sobic.007G154500 F-box protein, putative, expressed -
17 Sobic.003G361200 CDC6 - Putative DNA replication initiation protein, expressed K02213: cell division control protein 6
18 Sobic.006G134900 ribonucleoside-diphosphate reductase small chain, putative, expressed K10808: ribonucleoside-diphosphate reductase subunit M2
19 Sobic.001G070300 expressed protein -
20 Sobic.007G214700 fasciclin domain containing protein, expressed -


Gene co-expression network
sample Sobic004G238700 Sobic004G238700 Sobic010G230000 Sobic010G230000 Sobic004G238700--Sobic010G230000 Sobic001G439400 Sobic001G439400 Sobic004G238700--Sobic001G439400 Sobic007G176800 Sobic007G176800 Sobic004G238700--Sobic007G176800 Sobic001G142000 Sobic001G142000 Sobic004G238700--Sobic001G142000 Sobic001G456500 Sobic001G456500 Sobic004G238700--Sobic001G456500 Sobic006G116500 Sobic006G116500 Sobic004G238700--Sobic006G116500 Sobic010G204700 Sobic010G204700 Sobic004G238700--Sobic010G204700 Sobic002G258300 Sobic002G258300 Sobic004G238700--Sobic002G258300 Sobic009G227600 Sobic009G227600 Sobic004G238700--Sobic009G227600 Sobic010G230000--Sobic010G204700 Sobic010G230000--Sobic001G456500 Sobic010G230000--Sobic004G238700 Sobic004G229200 Sobic004G229200 Sobic010G230000--Sobic004G229200 Sobic010G230000--Sobic001G142000 Sobic006G081800 Sobic006G081800 Sobic010G230000--Sobic006G081800 Sobic004G075900 Sobic004G075900 Sobic010G230000--Sobic004G075900 Sobic010G230000--Sobic007G176800 Sobic002G128000 Sobic002G128000 Sobic010G230000--Sobic002G128000 Sobic001G439400--Sobic004G238700 Sobic001G439400--Sobic010G204700 Sobic004G238801 Sobic004G238801 Sobic001G439400--Sobic004G238801 Sobic005G024000 Sobic005G024000 Sobic001G439400--Sobic005G024000 Sobic003G444000 Sobic003G444000 Sobic001G439400--Sobic003G444000 Sobic001G439400--Sobic010G230000 Sobic008G119900 Sobic008G119900 Sobic001G439400--Sobic008G119900 Sobic001G009100 Sobic001G009100 Sobic001G439400--Sobic001G009100 Sobic001G146900 Sobic001G146900 Sobic001G439400--Sobic001G146900 Sobic006G134900 Sobic006G134900 Sobic007G176800--Sobic006G134900 Sobic003G442300 Sobic003G442300 Sobic007G176800--Sobic003G442300 Sobic001G261549 Sobic001G261549 Sobic007G176800--Sobic001G261549 Sobic009G189200 Sobic009G189200 Sobic007G176800--Sobic009G189200 Sobic007G214700 Sobic007G214700 Sobic007G176800--Sobic007G214700 Sobic007G176800--Sobic010G230000 Sobic004G355500 Sobic004G355500 Sobic007G176800--Sobic004G355500 Sobic005G047000 Sobic005G047000 Sobic007G176800--Sobic005G047000 Sobic001G169800 Sobic001G169800 Sobic007G176800--Sobic001G169800 Sobic001G142000--Sobic001G456500 Sobic010G054600 Sobic010G054600 Sobic001G142000--Sobic010G054600 Sobic004G331600 Sobic004G331600 Sobic001G142000--Sobic004G331600 Sobic003G444300 Sobic003G444300 Sobic001G142000--Sobic003G444300 Sobic008G129200 Sobic008G129200 Sobic001G142000--Sobic008G129200 Sobic001G083300 Sobic001G083300 Sobic001G142000--Sobic001G083300 Sobic001G142000--Sobic006G116500 Sobic001G013400 Sobic001G013400 Sobic001G142000--Sobic001G013400 Sobic001G142000--Sobic004G075900 Sobic001G456500--Sobic006G116500 Sobic001G456500--Sobic004G331600 Sobic001G456500--Sobic001G142000 Sobic001G456500--Sobic001G083300 Sobic001G456500--Sobic008G129200 Sobic002G223900 Sobic002G223900 Sobic001G456500--Sobic002G223900 Sobic001G456500--Sobic001G169800 Sobic001G456500--Sobic003G444300 Sobic001G456500--Sobic004G355500 Sobic006G116500--Sobic001G456500 Sobic006G116500--Sobic004G355500 Sobic006G116500--Sobic001G169800 Sobic001G070300 Sobic001G070300 Sobic006G116500--Sobic001G070300 Sobic003G179500 Sobic003G179500 Sobic006G116500--Sobic003G179500 Sobic006G116500--Sobic008G129200 Sobic006G116500--Sobic002G223900 Sobic006G116500--Sobic004G331600 Sobic004G047100 Sobic004G047100 Sobic006G116500--Sobic004G047100 Sobic003G374100 Sobic003G374100 Sobic010G204700--Sobic003G374100 Sobic005G020100 Sobic005G020100 Sobic010G204700--Sobic005G020100 Sobic010G204700--Sobic010G230000 Sobic007G121650 Sobic007G121650 Sobic010G204700--Sobic007G121650 Sobic007G007800 Sobic007G007800 Sobic010G204700--Sobic007G007800 Sobic010G204700--Sobic004G238801 Sobic010G204700--Sobic003G444000 Sobic006G111100 Sobic006G111100 Sobic010G204700--Sobic006G111100 Sobic010G204700--Sobic001G439400 Sobic002G385400 Sobic002G385400 Sobic002G258300--Sobic002G385400 Sobic004G285900 Sobic004G285900 Sobic002G258300--Sobic004G285900 Sobic007G150800 Sobic007G150800 Sobic002G258300--Sobic007G150800 Sobic003G084300 Sobic003G084300 Sobic002G258300--Sobic003G084300 Sobic003G011100 Sobic003G011100 Sobic002G258300--Sobic003G011100 Sobic001G078600 Sobic001G078600 Sobic002G258300--Sobic001G078600 Sobic006G140100 Sobic006G140100 Sobic002G258300--Sobic006G140100 Sobic004G344500 Sobic004G344500 Sobic002G258300--Sobic004G344500 Sobic006G278100 Sobic006G278100 Sobic002G258300--Sobic006G278100 Sobic001G403100 Sobic001G403100 Sobic009G227600--Sobic001G403100 Sobic007G152900 Sobic007G152900 Sobic009G227600--Sobic007G152900 Sobic009G227600--Sobic001G070300 Sobic009G227600--Sobic004G355500 Sobic009G227600--Sobic004G238700 Sobic004G271500 Sobic004G271500 Sobic009G227600--Sobic004G271500 Sobic009G227600--Sobic006G116500 Sobic002G191000 Sobic002G191000 Sobic009G227600--Sobic002G191000 Sobic001G103000 Sobic001G103000 Sobic009G227600--Sobic001G103000
Octagon: transcription factors


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