Gene annotation
Transcriptome id Sobic.007G154500.1
Synonym Sb07g022820
Functional annotation F-box protein, putative, expressed
UniProt C5YM84
Pfam PF12937
Panther DB PTHR32212 PTHR32212:SF82
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G10780 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os08g36570.1 : F-box protein, putative, expressed
MaizeGDB (Corn) Zm00025a005398 , Zm00025a030628
Brachypodium KQJ98602 , PNT77773
Barley HORVU5Hr1G068010.6 , HORVU5Hr1G068010.4 , HORVU5Hr1G068010.5 , HORVU5Hr1G068010.2 , HORVU5Hr1G068010.3 , HORVU5Hr1G068010.1
Wheat TraesCS5B02G235000 , TraesCS5D02G243500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G102900 expressed protein -
2 Sobic.001G078600 CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
3 Sobic.002G426800 zinc finger, C3HC4 type domain containing protein, expressed -
4 Sobic.002G146601 - -
5 Sobic.003G107200 SNF7 domain containing protein, putative, expressed K12198: CHMP5, charged multivesicular body protein 5
6 Sobic.006G116500 expressed protein -
7 Sobic.004G047100 EH domain-containing protein 1, putative, expressed K12483: EH domain-containing protein 1
8 Sobic.001G261549 - -
9 Sobic.004G285900 HMG1/2, putative, expressed -
10 Sobic.005G144600 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
11 Sobic.002G246900 expressed protein -
12 Sobic.009G181500 Up-reguralion under heat(PubMedID : 24916767)@cyclin, putative, expressed -
13 Sobic.009G033800 IF, putative, expressed -
14 Sobic.010G274000 cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
15 Sobic.009G189200 secretory carrier-associated membrane protein, putative, expressed -
16 Sobic.001G169800 cyclin, putative, expressed K06627: cyclin-A
17 Sobic.010G105400 chromosome condensation protein like, putative, expressed K06678: YCG1, condensin complex subunit 3
18 Sobic.003G179500 expressed protein K06676: BRRN1, BRN1, condensin complex subunit 2
19 Sobic.006G076400 histone H3, putative, expressed K11253: histone H3
20 Sobic.001G091500 expressed protein -


Gene co-expression network
sample Sobic007G154500 Sobic007G154500 Sobic006G102900 Sobic006G102900 Sobic007G154500--Sobic006G102900 Sobic001G078600 Sobic001G078600 Sobic007G154500--Sobic001G078600 Sobic002G426800 Sobic002G426800 Sobic007G154500--Sobic002G426800 Sobic002G146601 Sobic002G146601 Sobic007G154500--Sobic002G146601 Sobic003G107200 Sobic003G107200 Sobic007G154500--Sobic003G107200 Sobic006G116500 Sobic006G116500 Sobic007G154500--Sobic006G116500 Sobic004G047100 Sobic004G047100 Sobic007G154500--Sobic004G047100 Sobic001G261549 Sobic001G261549 Sobic007G154500--Sobic001G261549 Sobic004G285900 Sobic004G285900 Sobic007G154500--Sobic004G285900 Sobic006G102900--Sobic001G078600 Sobic006G102900--Sobic003G107200 Sobic009G181500 Sobic009G181500 Sobic006G102900--Sobic009G181500 Sobic006G102900--Sobic001G261549 Sobic006G102900--Sobic007G154500 Sobic006G102900--Sobic002G426800 Sobic010G274000 Sobic010G274000 Sobic006G102900--Sobic010G274000 Sobic006G102900--Sobic004G047100 Sobic009G189200 Sobic009G189200 Sobic006G102900--Sobic009G189200 Sobic001G078600--Sobic006G102900 Sobic001G078600--Sobic002G426800 Sobic001G078600--Sobic010G274000 Sobic005G144600 Sobic005G144600 Sobic001G078600--Sobic005G144600 Sobic004G197400 Sobic004G197400 Sobic001G078600--Sobic004G197400 Sobic001G078600--Sobic004G285900 Sobic001G078600--Sobic006G116500 Sobic001G528600 Sobic001G528600 Sobic001G078600--Sobic001G528600 Sobic001G078600--Sobic007G154500 Sobic002G426800--Sobic009G181500 Sobic001G091500 Sobic001G091500 Sobic002G426800--Sobic001G091500 Sobic002G426800--Sobic005G144600 Sobic002G426800--Sobic004G047100 Sobic003G260700 Sobic003G260700 Sobic002G426800--Sobic003G260700 Sobic002G426800--Sobic001G078600 Sobic003G314900 Sobic003G314900 Sobic002G426800--Sobic003G314900 Sobic003G444100 Sobic003G444100 Sobic002G426800--Sobic003G444100 Sobic010G105400 Sobic010G105400 Sobic002G426800--Sobic010G105400 Sobic002G146601--Sobic005G144600 Sobic002G394500 Sobic002G394500 Sobic002G146601--Sobic002G394500 Sobic002G146601--Sobic007G154500 Sobic007G168900 Sobic007G168900 Sobic002G146601--Sobic007G168900 Sobic002G383100 Sobic002G383100 Sobic002G146601--Sobic002G383100 Sobic010G241100 Sobic010G241100 Sobic002G146601--Sobic010G241100 Sobic003G179500 Sobic003G179500 Sobic002G146601--Sobic003G179500 Sobic002G146601--Sobic003G444100 Sobic002G146601--Sobic006G116500 Sobic003G107200--Sobic006G102900 Sobic002G246900 Sobic002G246900 Sobic003G107200--Sobic002G246900 Sobic003G107200--Sobic004G047100 Sobic003G107200--Sobic009G181500 Sobic003G107200--Sobic001G261549 Sobic003G107200--Sobic007G154500 Sobic003G107200--Sobic001G078600 Sobic002G236700 Sobic002G236700 Sobic003G107200--Sobic002G236700 Sobic003G107200--Sobic002G426800 Sobic001G456500 Sobic001G456500 Sobic006G116500--Sobic001G456500 Sobic004G355500 Sobic004G355500 Sobic006G116500--Sobic004G355500 Sobic001G169800 Sobic001G169800 Sobic006G116500--Sobic001G169800 Sobic001G070300 Sobic001G070300 Sobic006G116500--Sobic001G070300 Sobic006G116500--Sobic003G179500 Sobic008G129200 Sobic008G129200 Sobic006G116500--Sobic008G129200 Sobic002G223900 Sobic002G223900 Sobic006G116500--Sobic002G223900 Sobic004G331600 Sobic004G331600 Sobic006G116500--Sobic004G331600 Sobic006G116500--Sobic004G047100 Sobic004G047100--Sobic010G105400 Sobic004G047100--Sobic005G144600 Sobic004G047100--Sobic009G181500 Sobic004G047100--Sobic002G246900 Sobic004G047100--Sobic002G426800 Sobic004G047100--Sobic003G179500 Sobic004G047100--Sobic001G091500 Sobic004G047100--Sobic006G116500 Sobic003G387700 Sobic003G387700 Sobic004G047100--Sobic003G387700 Sobic001G261549--Sobic006G102900 Sobic001G261549--Sobic004G285900 Sobic001G261549--Sobic009G189200 Sobic006G191700 Sobic006G191700 Sobic001G261549--Sobic006G191700 Sobic009G194900 Sobic009G194900 Sobic001G261549--Sobic009G194900 Sobic001G261549--Sobic003G107200 Sobic001G261549--Sobic001G078600 Sobic001G261549--Sobic007G154500 Sobic008G096200 Sobic008G096200 Sobic001G261549--Sobic008G096200 Sobic004G285900--Sobic001G078600 Sobic004G285900--Sobic001G261549 Sobic004G279601 Sobic004G279601 Sobic004G285900--Sobic004G279601 Sobic007G214700 Sobic007G214700 Sobic004G285900--Sobic007G214700 Sobic004G285900--Sobic006G102900 Sobic002G162300 Sobic002G162300 Sobic004G285900--Sobic002G162300 Sobic004G285900--Sobic007G154500 Sobic004G285900--Sobic009G189200 Sobic001G205000 Sobic001G205000 Sobic004G285900--Sobic001G205000
Octagon: transcription factors


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