Gene annotation
Transcriptome id Sobic.002G246900.1
Synonym Sb02g028340
Functional annotation expressed protein
UniProt C5X3W9
Pfam -
Panther DB PTHR35507
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G12930 : -
RAP-DB (Rice) LOC_Os09g31350.1 : expressed protein
MaizeGDB (Corn) Zm00025a014204
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G047100 EH domain-containing protein 1, putative, expressed K12483: EH domain-containing protein 1
2 Sobic.010G105400 chromosome condensation protein like, putative, expressed K06678: YCG1, condensin complex subunit 3
3 Sobic.010G191000 expressed protein -
4 Sobic.003G107200 SNF7 domain containing protein, putative, expressed K12198: CHMP5, charged multivesicular body protein 5
5 Sobic.001G238900 OsFBX386 - F-box domain containing protein, expressed -
6 Sobic.009G181500 Up-reguralion under heat(PubMedID : 24916767)@cyclin, putative, expressed -
7 Sobic.002G236700 TMV-MP30 binding protein 2C, putative, expressed -
8 Sobic.001G169800 cyclin, putative, expressed K06627: cyclin-A
9 Sobic.002G230800 expressed protein -
10 Sobic.010G051100 OsPDIL1-5 protein disulfide isomerase PDIL1-5, expressed K09580: PDIA1, protein disulfide-isomerase A1
11 Sobic.003G179500 expressed protein K06676: BRRN1, BRN1, condensin complex subunit 2
12 Sobic.009G109300 POLA4 - Putative DNA polymerase alpha complex subunit, expressed K02684: DNA primase small subunit
13 Sobic.003G442300 NAD dependent epimerase/dehydratase family protein, putative, expressed K12449: UDP-apiose/xylose synthase
14 Sobic.001G105800 OsFBX109 - F-box domain containing protein, expressed -
15 Sobic.001G521100 POLD2 - Putative DNA polymerase delta complex subunit, expressed K02328: DNA polymerase delta subunit 2
16 Sobic.006G102900 expressed protein -
17 Sobic.006G116500 expressed protein -
18 Sobic.001G255600 endonuclease/Exonuclease/phosphatase family protein, expressed -
19 Sobic.001G289900 AT hook motif domain containing protein, expressed -
20 Sobic.006G179200 cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1


Gene co-expression network
sample Sobic002G246900 Sobic002G246900 Sobic004G047100 Sobic004G047100 Sobic002G246900--Sobic004G047100 Sobic010G105400 Sobic010G105400 Sobic002G246900--Sobic010G105400 Sobic010G191000 Sobic010G191000 Sobic002G246900--Sobic010G191000 Sobic003G107200 Sobic003G107200 Sobic002G246900--Sobic003G107200 Sobic001G238900 Sobic001G238900 Sobic002G246900--Sobic001G238900 Sobic009G181500 Sobic009G181500 Sobic002G246900--Sobic009G181500 Sobic002G236700 Sobic002G236700 Sobic002G246900--Sobic002G236700 Sobic001G169800 Sobic001G169800 Sobic002G246900--Sobic001G169800 Sobic002G230800 Sobic002G230800 Sobic002G246900--Sobic002G230800 Sobic004G047100--Sobic010G105400 Sobic005G144600 Sobic005G144600 Sobic004G047100--Sobic005G144600 Sobic004G047100--Sobic009G181500 Sobic004G047100--Sobic002G246900 Sobic002G426800 Sobic002G426800 Sobic004G047100--Sobic002G426800 Sobic003G179500 Sobic003G179500 Sobic004G047100--Sobic003G179500 Sobic001G091500 Sobic001G091500 Sobic004G047100--Sobic001G091500 Sobic006G116500 Sobic006G116500 Sobic004G047100--Sobic006G116500 Sobic003G387700 Sobic003G387700 Sobic004G047100--Sobic003G387700 Sobic010G105400--Sobic005G144600 Sobic010G105400--Sobic004G047100 Sobic009G184200 Sobic009G184200 Sobic010G105400--Sobic009G184200 Sobic005G000500 Sobic005G000500 Sobic010G105400--Sobic005G000500 Sobic001G398400 Sobic001G398400 Sobic010G105400--Sobic001G398400 Sobic010G105400--Sobic003G179500 Sobic006G124400 Sobic006G124400 Sobic010G105400--Sobic006G124400 Sobic007G168900 Sobic007G168900 Sobic010G105400--Sobic007G168900 Sobic002G204400 Sobic002G204400 Sobic010G105400--Sobic002G204400 Sobic010G191000--Sobic003G179500 Sobic010G191000--Sobic002G246900 Sobic010G191000--Sobic010G105400 Sobic010G191000--Sobic004G047100 Sobic010G051100 Sobic010G051100 Sobic010G191000--Sobic010G051100 Sobic010G191000--Sobic002G230800 Sobic010G191000--Sobic005G144600 Sobic001G255600 Sobic001G255600 Sobic010G191000--Sobic001G255600 Sobic006G102900 Sobic006G102900 Sobic010G191000--Sobic006G102900 Sobic003G107200--Sobic006G102900 Sobic003G107200--Sobic002G246900 Sobic003G107200--Sobic004G047100 Sobic003G107200--Sobic009G181500 Sobic001G261549 Sobic001G261549 Sobic003G107200--Sobic001G261549 Sobic007G154500 Sobic007G154500 Sobic003G107200--Sobic007G154500 Sobic001G078600 Sobic001G078600 Sobic003G107200--Sobic001G078600 Sobic003G107200--Sobic002G236700 Sobic003G107200--Sobic002G426800 Sobic003G244000 Sobic003G244000 Sobic001G238900--Sobic003G244000 Sobic001G238900--Sobic002G230800 Sobic001G105800 Sobic001G105800 Sobic001G238900--Sobic001G105800 Sobic001G238900--Sobic002G246900 Sobic002G223900 Sobic002G223900 Sobic001G238900--Sobic002G223900 Sobic009G109300 Sobic009G109300 Sobic001G238900--Sobic009G109300 Sobic004G317000 Sobic004G317000 Sobic001G238900--Sobic004G317000 Sobic001G118800 Sobic001G118800 Sobic001G238900--Sobic001G118800 Sobic001G238900--Sobic001G169800 Sobic009G181500--Sobic002G426800 Sobic009G181500--Sobic004G047100 Sobic009G181500--Sobic010G051100 Sobic006G035600 Sobic006G035600 Sobic009G181500--Sobic006G035600 Sobic009G181500--Sobic005G144600 Sobic010G274000 Sobic010G274000 Sobic009G181500--Sobic010G274000 Sobic009G181500--Sobic006G102900 Sobic001G070300 Sobic001G070300 Sobic009G181500--Sobic001G070300 Sobic003G294500 Sobic003G294500 Sobic009G181500--Sobic003G294500 Sobic002G236700--Sobic002G246900 Sobic001G140700 Sobic001G140700 Sobic002G236700--Sobic001G140700 Sobic001G532800 Sobic001G532800 Sobic002G236700--Sobic001G532800 Sobic002G236700--Sobic003G107200 Sobic002G236700--Sobic009G109300 Sobic007G112100 Sobic007G112100 Sobic002G236700--Sobic007G112100 Sobic002G315400 Sobic002G315400 Sobic002G236700--Sobic002G315400 Sobic007G218100 Sobic007G218100 Sobic002G236700--Sobic007G218100 Sobic002G236700--Sobic010G191000 Sobic001G456500 Sobic001G456500 Sobic001G169800--Sobic001G456500 Sobic001G169800--Sobic006G116500 Sobic003G444300 Sobic003G444300 Sobic001G169800--Sobic003G444300 Sobic001G083300 Sobic001G083300 Sobic001G169800--Sobic001G083300 Sobic001G169800--Sobic002G223900 Sobic003G183700 Sobic003G183700 Sobic001G169800--Sobic003G183700 Sobic001G169800--Sobic001G105800 Sobic004G355500 Sobic004G355500 Sobic001G169800--Sobic004G355500 Sobic001G169800--Sobic003G179500 Sobic002G230800--Sobic001G238900 Sobic002G230800--Sobic010G105400 Sobic002G230800--Sobic006G124400 Sobic001G054700 Sobic001G054700 Sobic002G230800--Sobic001G054700 Sobic002G230800--Sobic003G179500 Sobic002G230800--Sobic009G109300 Sobic002G230800--Sobic007G218100 Sobic002G230800--Sobic002G246900 Sobic002G230800--Sobic003G244000
Octagon: transcription factors


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