Gene annotation
Transcriptome id Sobic.006G179200.1
Synonym 4, Sb06g025380, CYCB2
Functional annotation cyclin, putative, expressed
UniProt C5YDZ8
Pfam PF00134 PF02984
Panther DB PTHR10177:SF196 PTHR10177
NCBI CDD KOG0654; G2/Mitotic-specific cyclin A
KEGG Orthology K05868; G2/mitotic-specific cyclin-B1
Gene Ontology GO:0005634; nucleus


Orthologs (automatic annotation)
TAIR AT1G76310 : CYCLIN B2;4
RAP-DB (Rice) LOC_Os04g47580.1 : cyclin, putative, expressed
MaizeGDB (Corn) Zm00025a010204 , Zm00025a056816
Brachypodium -
Barley HORVU2Hr1G096070.8 , HORVU2Hr1G096070.9 , HORVU2Hr1G096070.6 , HORVU2Hr1G096070.7 , HORVU2Hr1G096070.4 , HORVU2Hr1G096070.5 , HORVU2Hr1G096070.2 , HORVU2Hr1G096070.3 , HORVU2Hr1G096070.1 , HORVU2Hr1G096070.14 , HORVU2Hr1G096070.15 , HORVU2Hr1G096070.16 , HORVU2Hr1G096070.17 , HORVU2Hr1G096070.11 , HORVU2Hr1G096070.12 , HORVU2Hr1G096070.13 , HORVU2Hr1G096070.18 , HORVU2Hr1G096070.19
Wheat TraesCS2D02G401700 , TraesCS2D02G401700 , TraesCS2D02G401700 , TraesCS2B02G422800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G053900 expressed protein -
2 Sobic.010G105400 chromosome condensation protein like, putative, expressed K06678: YCG1, condensin complex subunit 3
3 Sobic.008G148000 kinesin motor domain containing protein, putative, expressed K10400: kinesin family member 15
4 Sobic.002G113400 dnaJ domain containing protein, expressed -
5 Sobic.006G035600 Kinesin motor domain domain containing protein, expressed K10400: kinesin family member 15
6 Sobic.001G131300 centromere protein, putative, expressed -
7 Sobic.001G170800 "Transport protein(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659835)@transport protein-related, putative, expressed -
8 Sobic.007G125300 BRCA1 C Terminus domain containing protein, expressed -
9 Sobic.005G000500 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
10 Sobic.007G207700 cyclin-dependent kinase B2-1, putative, expressed K07760: cyclin-dependent kinase
11 Sobic.009G181500 Up-reguralion under heat(PubMedID : 24916767)@cyclin, putative, expressed -
12 Sobic.006G134200 expressed protein -
13 Sobic.004G047100 EH domain-containing protein 1, putative, expressed K12483: EH domain-containing protein 1
14 Sobic.008G129200 MCM7 - Putative minichromosome maintenance MCM complex subunit 7, expressed K02210: MCM7, DNA replication licensing factor MCM7
15 Sobic.009G184200 RecF/RecN/SMC N terminal domain containing protein, expressed K06675: structural maintenance of chromosome 4
16 Sobic.002G204400 kinesin motor protein-related, putative, expressed K11498: centromeric protein E
17 Sobic.003G444100 "OsCCS52B(Ortholog in rice:Su’udi et al., 2012)"(PubMedID : 31659875)@WD repeat-containing protein, putative, expressed K03364: cell division cycle 20-like protein 1, cofactor of APC complex
18 Sobic.002G246900 expressed protein -
19 Sobic.001G175000 jmjC domain containing protein, expressed K15601: [histone H3]-dimethyl-L-lysine9 demethylase
20 Sobic.005G110535 - K02540: DNA replication licensing factor MCM2


Gene co-expression network
sample Sobic006G179200 Sobic006G179200 Sobic004G053900 Sobic004G053900 Sobic006G179200--Sobic004G053900 Sobic010G105400 Sobic010G105400 Sobic006G179200--Sobic010G105400 Sobic008G148000 Sobic008G148000 Sobic006G179200--Sobic008G148000 Sobic002G113400 Sobic002G113400 Sobic006G179200--Sobic002G113400 Sobic006G035600 Sobic006G035600 Sobic006G179200--Sobic006G035600 Sobic001G131300 Sobic001G131300 Sobic006G179200--Sobic001G131300 Sobic001G170800 Sobic001G170800 Sobic006G179200--Sobic001G170800 Sobic007G125300 Sobic007G125300 Sobic006G179200--Sobic007G125300 Sobic005G000500 Sobic005G000500 Sobic006G179200--Sobic005G000500 Sobic004G053900--Sobic002G113400 Sobic002G297500 Sobic002G297500 Sobic004G053900--Sobic002G297500 Sobic002G290000 Sobic002G290000 Sobic004G053900--Sobic002G290000 Sobic004G053900--Sobic007G125300 Sobic004G053900--Sobic008G148000 Sobic005G110535 Sobic005G110535 Sobic004G053900--Sobic005G110535 Sobic010G051100 Sobic010G051100 Sobic004G053900--Sobic010G051100 Sobic004G053900--Sobic006G179200 Sobic004G328300 Sobic004G328300 Sobic004G053900--Sobic004G328300 Sobic005G144600 Sobic005G144600 Sobic010G105400--Sobic005G144600 Sobic004G047100 Sobic004G047100 Sobic010G105400--Sobic004G047100 Sobic009G184200 Sobic009G184200 Sobic010G105400--Sobic009G184200 Sobic010G105400--Sobic005G000500 Sobic001G398400 Sobic001G398400 Sobic010G105400--Sobic001G398400 Sobic003G179500 Sobic003G179500 Sobic010G105400--Sobic003G179500 Sobic006G124400 Sobic006G124400 Sobic010G105400--Sobic006G124400 Sobic007G168900 Sobic007G168900 Sobic010G105400--Sobic007G168900 Sobic002G204400 Sobic002G204400 Sobic010G105400--Sobic002G204400 Sobic008G148000--Sobic005G000500 Sobic008G148000--Sobic002G204400 Sobic008G148000--Sobic001G170800 Sobic010G008900 Sobic010G008900 Sobic008G148000--Sobic010G008900 Sobic008G148000--Sobic007G168900 Sobic004G271300 Sobic004G271300 Sobic008G148000--Sobic004G271300 Sobic003G444100 Sobic003G444100 Sobic008G148000--Sobic003G444100 Sobic003G314900 Sobic003G314900 Sobic008G148000--Sobic003G314900 Sobic008G148000--Sobic009G184200 Sobic002G113400--Sobic004G053900 Sobic001G025900 Sobic001G025900 Sobic002G113400--Sobic001G025900 Sobic002G113400--Sobic002G297500 Sobic002G113400--Sobic002G290000 Sobic001G013400 Sobic001G013400 Sobic002G113400--Sobic001G013400 Sobic002G113400--Sobic008G148000 Sobic002G113400--Sobic005G110535 Sobic002G113400--Sobic007G125300 Sobic002G113400--Sobic010G051100 Sobic003G118100 Sobic003G118100 Sobic006G035600--Sobic003G118100 Sobic006G035600--Sobic001G131300 Sobic002G191000 Sobic002G191000 Sobic006G035600--Sobic002G191000 Sobic009G181500 Sobic009G181500 Sobic006G035600--Sobic009G181500 Sobic006G035600--Sobic010G008900 Sobic006G035600--Sobic005G000500 Sobic003G294500 Sobic003G294500 Sobic006G035600--Sobic003G294500 Sobic006G035600--Sobic010G051100 Sobic006G035600--Sobic008G148000 Sobic001G131300--Sobic006G035600 Sobic001G177900 Sobic001G177900 Sobic001G131300--Sobic001G177900 Sobic001G131300--Sobic005G000500 Sobic001G131300--Sobic003G118100 Sobic001G131300--Sobic010G008900 Sobic001G131300--Sobic007G168900 Sobic001G131300--Sobic006G179200 Sobic001G131300--Sobic005G144600 Sobic001G131300--Sobic003G314900 Sobic001G170800--Sobic005G000500 Sobic003G260700 Sobic003G260700 Sobic001G170800--Sobic003G260700 Sobic001G170800--Sobic003G444100 Sobic001G170800--Sobic001G398400 Sobic001G170800--Sobic004G271300 Sobic001G170800--Sobic008G148000 Sobic001G170800--Sobic010G008900 Sobic001G170800--Sobic001G177900 Sobic004G339500 Sobic004G339500 Sobic001G170800--Sobic004G339500 Sobic007G125300--Sobic002G290000 Sobic007G125300--Sobic005G110535 Sobic007G125300--Sobic008G148000 Sobic007G125300--Sobic004G053900 Sobic001G109700 Sobic001G109700 Sobic007G125300--Sobic001G109700 Sobic001G377700 Sobic001G377700 Sobic007G125300--Sobic001G377700 Sobic007G125300--Sobic002G204400 Sobic007G125300--Sobic003G118100 Sobic007G125300--Sobic002G113400 Sobic005G000500--Sobic007G168900 Sobic005G000500--Sobic001G170800 Sobic005G000500--Sobic008G148000 Sobic005G000500--Sobic003G444100 Sobic005G000500--Sobic003G314900 Sobic005G000500--Sobic004G271300 Sobic005G000500--Sobic005G144600 Sobic005G000500--Sobic010G008900 Sobic005G000500--Sobic001G177900
Octagon: transcription factors


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