Gene annotation
Transcriptome id Sobic.001G238900.1
Synonym Sb01g021140
Functional annotation OsFBX386 - F-box domain containing protein, expressed
UniProt C5X0J1
Pfam -
Panther DB PTHR34049 PTHR34049:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G35930 : F-box family protein
RAP-DB (Rice) LOC_Os10g30280.1 : OsFBX386 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a017749 , Zm00025a006823
Brachypodium KQJ96849 , KQJ96848
Barley -
Wheat TraesCS1A02G136000 , TraesCS1A02G136000 , TraesCS1B02G156200 , TraesCS1B02G156200
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G244000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
2 Sobic.002G230800 expressed protein -
3 Sobic.001G105800 OsFBX109 - F-box domain containing protein, expressed -
4 Sobic.002G246900 expressed protein -
5 Sobic.002G223900 OsFBX330 - F-box domain containing protein, expressed -
6 Sobic.009G109300 POLA4 - Putative DNA polymerase alpha complex subunit, expressed K02684: DNA primase small subunit
7 Sobic.004G317000 growth regulating factor protein, putative, expressed -
8 Sobic.001G118800 homologous-pairing protein meu13, putative, expressed K06695: 26S proteasome regulatory subunit, ATPase 3, interacting protein
9 Sobic.001G169800 cyclin, putative, expressed K06627: cyclin-A
10 Sobic.002G190000 ZOS9-05 - C2H2 zinc finger protein, expressed -
11 Sobic.003G444300 expressed protein K11550: SPBC25, kinetochore protein Spc25, animal type
12 Sobic.003G055600 expressed protein -
13 Sobic.001G083300 transducin family protein, putative, expressed K02180: cell cycle arrest protein BUB3
14 Sobic.003G183700 MCM4 - Putative minichromosome maintenance MCM complex subunit 4, expressed K02212: MCM4, DNA replication licensing factor MCM4
15 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
16 Sobic.005G157300 protein binding protein, putative, expressed -
17 Sobic.007G121650 - -
18 Sobic.010G105400 chromosome condensation protein like, putative, expressed K06678: YCG1, condensin complex subunit 3
19 Sobic.004G047100 EH domain-containing protein 1, putative, expressed K12483: EH domain-containing protein 1
20 Sobic.009G143200 DUF630/DUF632 domains containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G238900 Sobic001G238900 Sobic003G244000 Sobic003G244000 Sobic001G238900--Sobic003G244000 Sobic002G230800 Sobic002G230800 Sobic001G238900--Sobic002G230800 Sobic001G105800 Sobic001G105800 Sobic001G238900--Sobic001G105800 Sobic002G246900 Sobic002G246900 Sobic001G238900--Sobic002G246900 Sobic002G223900 Sobic002G223900 Sobic001G238900--Sobic002G223900 Sobic009G109300 Sobic009G109300 Sobic001G238900--Sobic009G109300 Sobic004G317000 Sobic004G317000 Sobic001G238900--Sobic004G317000 Sobic001G118800 Sobic001G118800 Sobic001G238900--Sobic001G118800 Sobic001G169800 Sobic001G169800 Sobic001G238900--Sobic001G169800 Sobic003G244000--Sobic001G238900 Sobic001G054700 Sobic001G054700 Sobic003G244000--Sobic001G054700 Sobic007G201900 Sobic007G201900 Sobic003G244000--Sobic007G201900 Sobic003G244000--Sobic002G230800 Sobic002G351100 Sobic002G351100 Sobic003G244000--Sobic002G351100 Sobic003G244000--Sobic001G118800 Sobic009G143200 Sobic009G143200 Sobic003G244000--Sobic009G143200 Sobic005G157300 Sobic005G157300 Sobic003G244000--Sobic005G157300 Sobic003G244000--Sobic004G317000 Sobic002G230800--Sobic001G238900 Sobic010G105400 Sobic010G105400 Sobic002G230800--Sobic010G105400 Sobic006G124400 Sobic006G124400 Sobic002G230800--Sobic006G124400 Sobic002G230800--Sobic001G054700 Sobic003G179500 Sobic003G179500 Sobic002G230800--Sobic003G179500 Sobic002G230800--Sobic009G109300 Sobic007G218100 Sobic007G218100 Sobic002G230800--Sobic007G218100 Sobic002G230800--Sobic002G246900 Sobic002G230800--Sobic003G244000 Sobic007G007800 Sobic007G007800 Sobic001G105800--Sobic007G007800 Sobic001G105800--Sobic002G223900 Sobic009G184200 Sobic009G184200 Sobic001G105800--Sobic009G184200 Sobic003G444300 Sobic003G444300 Sobic001G105800--Sobic003G444300 Sobic003G387700 Sobic003G387700 Sobic001G105800--Sobic003G387700 Sobic001G083300 Sobic001G083300 Sobic001G105800--Sobic001G083300 Sobic001G456500 Sobic001G456500 Sobic001G105800--Sobic001G456500 Sobic001G105800--Sobic010G105400 Sobic009G172950 Sobic009G172950 Sobic001G105800--Sobic009G172950 Sobic004G047100 Sobic004G047100 Sobic002G246900--Sobic004G047100 Sobic002G246900--Sobic010G105400 Sobic010G191000 Sobic010G191000 Sobic002G246900--Sobic010G191000 Sobic003G107200 Sobic003G107200 Sobic002G246900--Sobic003G107200 Sobic002G246900--Sobic001G238900 Sobic009G181500 Sobic009G181500 Sobic002G246900--Sobic009G181500 Sobic002G236700 Sobic002G236700 Sobic002G246900--Sobic002G236700 Sobic002G246900--Sobic001G169800 Sobic002G246900--Sobic002G230800 Sobic002G223900--Sobic001G456500 Sobic002G223900--Sobic001G083300 Sobic002G223900--Sobic001G105800 Sobic004G331600 Sobic004G331600 Sobic002G223900--Sobic004G331600 Sobic002G223900--Sobic007G007800 Sobic008G129200 Sobic008G129200 Sobic002G223900--Sobic008G129200 Sobic006G116500 Sobic006G116500 Sobic002G223900--Sobic006G116500 Sobic003G183700 Sobic003G183700 Sobic002G223900--Sobic003G183700 Sobic002G223900--Sobic003G387700 Sobic007G112100 Sobic007G112100 Sobic009G109300--Sobic007G112100 Sobic006G051000 Sobic006G051000 Sobic009G109300--Sobic006G051000 Sobic010G103700 Sobic010G103700 Sobic009G109300--Sobic010G103700 Sobic006G195500 Sobic006G195500 Sobic009G109300--Sobic006G195500 Sobic009G109300--Sobic001G238900 Sobic009G109300--Sobic002G230800 Sobic009G109300--Sobic003G183700 Sobic009G109300--Sobic003G179500 Sobic009G109300--Sobic002G246900 Sobic004G317000--Sobic009G143200 Sobic007G187700 Sobic007G187700 Sobic004G317000--Sobic007G187700 Sobic001G104500 Sobic001G104500 Sobic004G317000--Sobic001G104500 Sobic006G196600 Sobic006G196600 Sobic004G317000--Sobic006G196600 Sobic003G282500 Sobic003G282500 Sobic004G317000--Sobic003G282500 Sobic004G317000--Sobic001G238900 Sobic004G317000--Sobic001G054700 Sobic004G317000--Sobic002G223900 Sobic004G282601 Sobic004G282601 Sobic004G317000--Sobic004G282601 Sobic007G121650 Sobic007G121650 Sobic001G118800--Sobic007G121650 Sobic001G118800--Sobic001G238900 Sobic003G055600 Sobic003G055600 Sobic001G118800--Sobic003G055600 Sobic001G118800--Sobic003G244000 Sobic002G190000 Sobic002G190000 Sobic001G118800--Sobic002G190000 Sobic004G190500 Sobic004G190500 Sobic001G118800--Sobic004G190500 Sobic003G204200 Sobic003G204200 Sobic001G118800--Sobic003G204200 Sobic001G118800--Sobic004G317000 Sobic007G121600 Sobic007G121600 Sobic001G118800--Sobic007G121600 Sobic001G169800--Sobic001G456500 Sobic001G169800--Sobic006G116500 Sobic001G169800--Sobic003G444300 Sobic001G169800--Sobic001G083300 Sobic001G169800--Sobic002G223900 Sobic001G169800--Sobic003G183700 Sobic001G169800--Sobic001G105800 Sobic004G355500 Sobic004G355500 Sobic001G169800--Sobic004G355500 Sobic001G169800--Sobic003G179500
Octagon: transcription factors


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