Gene annotation
Transcriptome id Sobic.001G105800.1
Synonym Sb01g009440
Functional annotation OsFBX109 - F-box domain containing protein, expressed
UniProt C5WM15
Pfam PF12937
Panther DB PTHR31264 PTHR31264:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G33530 : F-box family protein
RAP-DB (Rice) LOC_Os03g51760.1 : OsFBX109 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a007984
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G007800 DNA repair metallo-beta-lactamase, putative, expressed K15340: DCLRE1A, SNM1A, DNA cross-link repair 1A protein
2 Sobic.002G223900 OsFBX330 - F-box domain containing protein, expressed -
3 Sobic.009G184200 RecF/RecN/SMC N terminal domain containing protein, expressed K06675: structural maintenance of chromosome 4
4 Sobic.003G444300 expressed protein K11550: SPBC25, kinetochore protein Spc25, animal type
5 Sobic.003G387700 expressed protein -
6 Sobic.001G083300 transducin family protein, putative, expressed K02180: cell cycle arrest protein BUB3
7 Sobic.001G456500 RPA1B - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
8 Sobic.010G105400 chromosome condensation protein like, putative, expressed K06678: YCG1, condensin complex subunit 3
9 Sobic.009G172950 - K02541: DNA replication licensing factor MCM3
10 Sobic.004G327600 expressed protein -
11 Sobic.001G169800 cyclin, putative, expressed K06627: cyclin-A
12 Sobic.010G092400 glycosyl transferase 8 domain containing protein, putative, expressed -
13 Sobic.001G142000 deoxyuridine 5-triphosphate nucleotidohydrolase, putative, expressed K01520: dut, dUTP pyrophosphatase
14 Sobic.001G238900 OsFBX386 - F-box domain containing protein, expressed -
15 Sobic.004G257600 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
16 Sobic.004G047100 EH domain-containing protein 1, putative, expressed K12483: EH domain-containing protein 1
17 Sobic.001G013400 nuf2 family protein, expressed -
18 Sobic.004G075900 CSLA1 - cellulose synthase-like family A@ mannan synthase, expressed K13680: beta-mannan synthase
19 Sobic.007G008300 WD domain, G-beta repeat domain containing protein, expressed K10751: chromatin assembly factor 1 subunit B
20 Sobic.003G032200 IQ calmodulin-binding motif domain containing protein, expressed -


Gene co-expression network
sample Sobic001G105800 Sobic001G105800 Sobic007G007800 Sobic007G007800 Sobic001G105800--Sobic007G007800 Sobic002G223900 Sobic002G223900 Sobic001G105800--Sobic002G223900 Sobic009G184200 Sobic009G184200 Sobic001G105800--Sobic009G184200 Sobic003G444300 Sobic003G444300 Sobic001G105800--Sobic003G444300 Sobic003G387700 Sobic003G387700 Sobic001G105800--Sobic003G387700 Sobic001G083300 Sobic001G083300 Sobic001G105800--Sobic001G083300 Sobic001G456500 Sobic001G456500 Sobic001G105800--Sobic001G456500 Sobic010G105400 Sobic010G105400 Sobic001G105800--Sobic010G105400 Sobic009G172950 Sobic009G172950 Sobic001G105800--Sobic009G172950 Sobic002G272300 Sobic002G272300 Sobic007G007800--Sobic002G272300 Sobic007G007800--Sobic001G105800 Sobic007G007800--Sobic009G184200 Sobic001G013400 Sobic001G013400 Sobic007G007800--Sobic001G013400 Sobic007G007800--Sobic002G223900 Sobic004G331600 Sobic004G331600 Sobic007G007800--Sobic004G331600 Sobic005G020100 Sobic005G020100 Sobic007G007800--Sobic005G020100 Sobic010G092400 Sobic010G092400 Sobic007G007800--Sobic010G092400 Sobic007G007800--Sobic001G083300 Sobic002G223900--Sobic001G456500 Sobic002G223900--Sobic001G083300 Sobic002G223900--Sobic001G105800 Sobic002G223900--Sobic004G331600 Sobic002G223900--Sobic007G007800 Sobic008G129200 Sobic008G129200 Sobic002G223900--Sobic008G129200 Sobic006G116500 Sobic006G116500 Sobic002G223900--Sobic006G116500 Sobic003G183700 Sobic003G183700 Sobic002G223900--Sobic003G183700 Sobic002G223900--Sobic003G387700 Sobic002G204400 Sobic002G204400 Sobic009G184200--Sobic002G204400 Sobic009G184200--Sobic010G105400 Sobic001G398400 Sobic001G398400 Sobic009G184200--Sobic001G398400 Sobic003G393100 Sobic003G393100 Sobic009G184200--Sobic003G393100 Sobic010G129700 Sobic010G129700 Sobic009G184200--Sobic010G129700 Sobic003G032200 Sobic003G032200 Sobic009G184200--Sobic003G032200 Sobic001G170800 Sobic001G170800 Sobic009G184200--Sobic001G170800 Sobic009G184200--Sobic007G007800 Sobic003G260700 Sobic003G260700 Sobic009G184200--Sobic003G260700 Sobic003G444300--Sobic001G456500 Sobic003G444300--Sobic001G083300 Sobic001G169800 Sobic001G169800 Sobic003G444300--Sobic001G169800 Sobic003G444300--Sobic001G105800 Sobic001G142000 Sobic001G142000 Sobic003G444300--Sobic001G142000 Sobic003G444300--Sobic004G331600 Sobic003G201000 Sobic003G201000 Sobic003G444300--Sobic003G201000 Sobic002G303800 Sobic002G303800 Sobic003G444300--Sobic002G303800 Sobic003G444300--Sobic010G105400 Sobic004G257600 Sobic004G257600 Sobic003G387700--Sobic004G257600 Sobic006G134200 Sobic006G134200 Sobic003G387700--Sobic006G134200 Sobic003G387700--Sobic010G105400 Sobic001G091500 Sobic001G091500 Sobic003G387700--Sobic001G091500 Sobic003G387700--Sobic001G105800 Sobic010G119300 Sobic010G119300 Sobic003G387700--Sobic010G119300 Sobic003G387700--Sobic001G398400 Sobic003G328500 Sobic003G328500 Sobic003G387700--Sobic003G328500 Sobic007G100600 Sobic007G100600 Sobic003G387700--Sobic007G100600 Sobic001G083300--Sobic001G456500 Sobic001G083300--Sobic002G223900 Sobic001G083300--Sobic003G444300 Sobic010G147700 Sobic010G147700 Sobic001G083300--Sobic010G147700 Sobic009G087000 Sobic009G087000 Sobic001G083300--Sobic009G087000 Sobic001G083300--Sobic003G183700 Sobic001G083300--Sobic008G129200 Sobic001G083300--Sobic001G105800 Sobic001G083300--Sobic004G331600 Sobic001G456500--Sobic006G116500 Sobic001G456500--Sobic004G331600 Sobic001G456500--Sobic001G142000 Sobic001G456500--Sobic001G083300 Sobic001G456500--Sobic008G129200 Sobic001G456500--Sobic002G223900 Sobic001G456500--Sobic001G169800 Sobic001G456500--Sobic003G444300 Sobic004G355500 Sobic004G355500 Sobic001G456500--Sobic004G355500 Sobic005G144600 Sobic005G144600 Sobic010G105400--Sobic005G144600 Sobic004G047100 Sobic004G047100 Sobic010G105400--Sobic004G047100 Sobic010G105400--Sobic009G184200 Sobic005G000500 Sobic005G000500 Sobic010G105400--Sobic005G000500 Sobic010G105400--Sobic001G398400 Sobic003G179500 Sobic003G179500 Sobic010G105400--Sobic003G179500 Sobic006G124400 Sobic006G124400 Sobic010G105400--Sobic006G124400 Sobic007G168900 Sobic007G168900 Sobic010G105400--Sobic007G168900 Sobic010G105400--Sobic002G204400 Sobic009G172950--Sobic003G183700 Sobic009G172950--Sobic009G087000 Sobic009G172950--Sobic003G032200 Sobic009G172950--Sobic003G444300 Sobic009G172950--Sobic001G083300 Sobic009G172950--Sobic009G184200 Sobic004G321400 Sobic004G321400 Sobic009G172950--Sobic004G321400 Sobic009G172950--Sobic001G105800 Sobic001G146900 Sobic001G146900 Sobic009G172950--Sobic001G146900
Octagon: transcription factors


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