Gene annotation
Transcriptome id Sobic.001G142000.1
Synonym DUT1
Functional annotation deoxyuridine 5-triphosphate nucleotidohydrolase, putative, expressed
UniProt C5WQ96
Pfam PF00692
Panther DB PTHR11241
NCBI CDD KOG3370; dUTPase
KEGG Orthology K01520; dut, dUTP pyrophosphatase
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR AT3G46940 : DUTP-PYROPHOSPHATASE-LIKE 1
RAP-DB (Rice) LOC_Os03g46640.1 : deoxyuridine 5-triphosphate nucleotidohydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a007521
Brachypodium KQK13841
Barley HORVU4Hr1G003120.1 , HORVU4Hr1G003120.3 , HORVU2Hr1G066500.1 , HORVU7Hr1G111340.1
Wheat TraesCS5A02G015500 , TraesCS5B02G013800 , TraesCS4B02G019800 , TraesCS5D02G021400 , TraesCS4D02G017900 , TraesCS4D02G017900 , TraesCS4A02G293900 , TraesCS4A02G293900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G456500 RPA1B - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
2 Sobic.010G054600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribonucleoside-diphosphate reductase large subunit, putative, expressed K10807: ribonucleoside-diphosphate reductase subunit M1
3 Sobic.004G331600 MCM5 - Putative minichromosome maintenance MCM complex subunit 5, expressed K02209: MCM5, DNA replication licensing factor MCM5
4 Sobic.003G444300 expressed protein K11550: SPBC25, kinetochore protein Spc25, animal type
5 Sobic.008G129200 MCM7 - Putative minichromosome maintenance MCM complex subunit 7, expressed K02210: MCM7, DNA replication licensing factor MCM7
6 Sobic.001G083300 transducin family protein, putative, expressed K02180: cell cycle arrest protein BUB3
7 Sobic.006G116500 expressed protein -
8 Sobic.001G013400 nuf2 family protein, expressed -
9 Sobic.004G075900 CSLA1 - cellulose synthase-like family A@ mannan synthase, expressed K13680: beta-mannan synthase
10 Sobic.007G100600 plastocyanin-like domain containing protein, putative, expressed -
11 Sobic.003G201000 WD domain, G-beta repeat domain containing protein, expressed -
12 Sobic.004G257600 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
13 Sobic.002G223900 OsFBX330 - F-box domain containing protein, expressed -
14 Sobic.003G361200 CDC6 - Putative DNA replication initiation protein, expressed K02213: cell division control protein 6
15 Sobic.001G169800 cyclin, putative, expressed K06627: cyclin-A
16 Sobic.001G105800 OsFBX109 - F-box domain containing protein, expressed -
17 Sobic.004G119700 WD repeat-containing protein, putative, expressed K03363: cell division cycle 20, cofactor of APC complex
18 Sobic.001G070300 expressed protein -
19 Sobic.002G272300 expressed protein -
20 Sobic.010G003100 monocopper oxidase, putative, expressed -


Gene co-expression network
sample Sobic001G142000 Sobic001G142000 Sobic001G456500 Sobic001G456500 Sobic001G142000--Sobic001G456500 Sobic010G054600 Sobic010G054600 Sobic001G142000--Sobic010G054600 Sobic004G331600 Sobic004G331600 Sobic001G142000--Sobic004G331600 Sobic003G444300 Sobic003G444300 Sobic001G142000--Sobic003G444300 Sobic008G129200 Sobic008G129200 Sobic001G142000--Sobic008G129200 Sobic001G083300 Sobic001G083300 Sobic001G142000--Sobic001G083300 Sobic006G116500 Sobic006G116500 Sobic001G142000--Sobic006G116500 Sobic001G013400 Sobic001G013400 Sobic001G142000--Sobic001G013400 Sobic004G075900 Sobic004G075900 Sobic001G142000--Sobic004G075900 Sobic001G456500--Sobic006G116500 Sobic001G456500--Sobic004G331600 Sobic001G456500--Sobic001G142000 Sobic001G456500--Sobic001G083300 Sobic001G456500--Sobic008G129200 Sobic002G223900 Sobic002G223900 Sobic001G456500--Sobic002G223900 Sobic001G169800 Sobic001G169800 Sobic001G456500--Sobic001G169800 Sobic001G456500--Sobic003G444300 Sobic004G355500 Sobic004G355500 Sobic001G456500--Sobic004G355500 Sobic010G054600--Sobic004G331600 Sobic010G054600--Sobic001G142000 Sobic010G054600--Sobic008G129200 Sobic004G119700 Sobic004G119700 Sobic010G054600--Sobic004G119700 Sobic010G054600--Sobic001G456500 Sobic003G201000 Sobic003G201000 Sobic010G054600--Sobic003G201000 Sobic003G361200 Sobic003G361200 Sobic010G054600--Sobic003G361200 Sobic010G147700 Sobic010G147700 Sobic010G054600--Sobic010G147700 Sobic009G087000 Sobic009G087000 Sobic010G054600--Sobic009G087000 Sobic004G331600--Sobic001G456500 Sobic004G331600--Sobic008G129200 Sobic004G331600--Sobic010G054600 Sobic004G331600--Sobic009G087000 Sobic004G331600--Sobic001G142000 Sobic004G331600--Sobic002G223900 Sobic003G183700 Sobic003G183700 Sobic004G331600--Sobic003G183700 Sobic004G331600--Sobic010G147700 Sobic007G007800 Sobic007G007800 Sobic004G331600--Sobic007G007800 Sobic003G444300--Sobic001G456500 Sobic003G444300--Sobic001G083300 Sobic003G444300--Sobic001G169800 Sobic001G105800 Sobic001G105800 Sobic003G444300--Sobic001G105800 Sobic003G444300--Sobic001G142000 Sobic003G444300--Sobic004G331600 Sobic003G444300--Sobic003G201000 Sobic002G303800 Sobic002G303800 Sobic003G444300--Sobic002G303800 Sobic010G105400 Sobic010G105400 Sobic003G444300--Sobic010G105400 Sobic008G129200--Sobic004G331600 Sobic008G129200--Sobic009G087000 Sobic005G110535 Sobic005G110535 Sobic008G129200--Sobic005G110535 Sobic008G129200--Sobic001G456500 Sobic008G129200--Sobic010G147700 Sobic008G129200--Sobic003G183700 Sobic008G129200--Sobic001G083300 Sobic008G129200--Sobic010G054600 Sobic008G129200--Sobic006G116500 Sobic001G083300--Sobic001G456500 Sobic001G083300--Sobic002G223900 Sobic001G083300--Sobic003G444300 Sobic001G083300--Sobic010G147700 Sobic001G083300--Sobic009G087000 Sobic001G083300--Sobic003G183700 Sobic001G083300--Sobic008G129200 Sobic001G083300--Sobic001G105800 Sobic001G083300--Sobic004G331600 Sobic006G116500--Sobic001G456500 Sobic006G116500--Sobic004G355500 Sobic006G116500--Sobic001G169800 Sobic001G070300 Sobic001G070300 Sobic006G116500--Sobic001G070300 Sobic003G179500 Sobic003G179500 Sobic006G116500--Sobic003G179500 Sobic006G116500--Sobic008G129200 Sobic006G116500--Sobic002G223900 Sobic006G116500--Sobic004G331600 Sobic004G047100 Sobic004G047100 Sobic006G116500--Sobic004G047100 Sobic001G025900 Sobic001G025900 Sobic001G013400--Sobic001G025900 Sobic001G013400--Sobic007G007800 Sobic002G290000 Sobic002G290000 Sobic001G013400--Sobic002G290000 Sobic002G113400 Sobic002G113400 Sobic001G013400--Sobic002G113400 Sobic001G013400--Sobic008G129200 Sobic001G013400--Sobic001G142000 Sobic001G013400--Sobic005G110535 Sobic001G013400--Sobic001G083300 Sobic001G013400--Sobic004G331600 Sobic004G075900--Sobic001G142000 Sobic004G075900--Sobic001G105800 Sobic004G075900--Sobic007G007800 Sobic004G075900--Sobic001G013400 Sobic004G075900--Sobic004G331600 Sobic007G100600 Sobic007G100600 Sobic004G075900--Sobic007G100600 Sobic004G075900--Sobic003G444300 Sobic004G075900--Sobic001G456500 Sobic003G387700 Sobic003G387700 Sobic004G075900--Sobic003G387700
Octagon: transcription factors


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