Gene annotation
Transcriptome id Sobic.009G033800.2,Sobic.009G033800.1
Synonym Sb09g002860
Functional annotation IF, putative, expressed
UniProt A0A1Z5R1Q8 , C5YZJ6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G26770 : -
RAP-DB (Rice) LOC_Os05g04530.1 : IF, putative, expressed
MaizeGDB (Corn) Zm00025a015317 , Zm00025a055324 , Zm00025a038136 , Zm00025a043055 , Zm00025a031077 , Zm00025a010487
Brachypodium KQK07679 , KQK07678
Barley -
Wheat TraesCS1A02G079800
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G129700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@sex determination protein tasselseed-2, putative, expressed -
2 Sobic.010G222100 MBTB10 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
3 Sobic.001G289900 AT hook motif domain containing protein, expressed -
4 Sobic.007G154500 F-box protein, putative, expressed -
5 Sobic.006G102900 expressed protein -
6 Sobic.004G331200 expressed protein -
7 Sobic.002G289800 HMG1/2, putative, expressed -
8 Sobic.003G107200 SNF7 domain containing protein, putative, expressed K12198: CHMP5, charged multivesicular body protein 5
9 Sobic.002G426800 zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.001G078600 CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
11 Sobic.004G047100 EH domain-containing protein 1, putative, expressed K12483: EH domain-containing protein 1
12 Sobic.010G105400 chromosome condensation protein like, putative, expressed K06678: YCG1, condensin complex subunit 3
13 Sobic.001G255600 endonuclease/Exonuclease/phosphatase family protein, expressed -
14 Sobic.001G133300 LTPL90 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
15 Sobic.001G261549 - -
16 Sobic.003G279100 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
17 Sobic.010G191000 expressed protein -
18 Sobic.002G353200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsBZR1(Ortholog in rice:Zhu et al. (2015))(PubMedID : 31659861)@BES1/BZR1 homolog protein, putative, expressed K14503: brassinosteroid resistant 1/2
19 Sobic.002G246900 expressed protein -
20 Sobic.010G274000 cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1


Gene co-expression network
sample Sobic009G033800 Sobic009G033800 Sobic005G129700 Sobic005G129700 Sobic009G033800--Sobic005G129700 Sobic010G222100 Sobic010G222100 Sobic009G033800--Sobic010G222100 Sobic001G289900 Sobic001G289900 Sobic009G033800--Sobic001G289900 Sobic007G154500 Sobic007G154500 Sobic009G033800--Sobic007G154500 Sobic006G102900 Sobic006G102900 Sobic009G033800--Sobic006G102900 Sobic004G331200 Sobic004G331200 Sobic009G033800--Sobic004G331200 Sobic002G289800 Sobic002G289800 Sobic009G033800--Sobic002G289800 Sobic003G107200 Sobic003G107200 Sobic009G033800--Sobic003G107200 Sobic002G426800 Sobic002G426800 Sobic009G033800--Sobic002G426800 Sobic005G129700--Sobic009G033800 Sobic001G255600 Sobic001G255600 Sobic005G129700--Sobic001G255600 Sobic010G227200 Sobic010G227200 Sobic005G129700--Sobic010G227200 Sobic005G129700--Sobic001G289900 Sobic005G129700--Sobic006G102900 Sobic005G129700--Sobic010G222100 Sobic010G191000 Sobic010G191000 Sobic005G129700--Sobic010G191000 Sobic001G133300 Sobic001G133300 Sobic005G129700--Sobic001G133300 Sobic005G129700--Sobic004G331200 Sobic010G222100--Sobic002G289800 Sobic010G222100--Sobic009G033800 Sobic002G353200 Sobic002G353200 Sobic010G222100--Sobic002G353200 Sobic010G215800 Sobic010G215800 Sobic010G222100--Sobic010G215800 Sobic010G222100--Sobic001G289900 Sobic001G505000 Sobic001G505000 Sobic010G222100--Sobic001G505000 Sobic010G222100--Sobic005G129700 Sobic007G132900 Sobic007G132900 Sobic010G222100--Sobic007G132900 Sobic003G279100 Sobic003G279100 Sobic010G222100--Sobic003G279100 Sobic010G105400 Sobic010G105400 Sobic001G289900--Sobic010G105400 Sobic001G289900--Sobic002G289800 Sobic001G289900--Sobic007G132900 Sobic003G387700 Sobic003G387700 Sobic001G289900--Sobic003G387700 Sobic004G047100 Sobic004G047100 Sobic001G289900--Sobic004G047100 Sobic001G398400 Sobic001G398400 Sobic001G289900--Sobic001G398400 Sobic004G273000 Sobic004G273000 Sobic001G289900--Sobic004G273000 Sobic001G091500 Sobic001G091500 Sobic001G289900--Sobic001G091500 Sobic001G289900--Sobic002G426800 Sobic007G154500--Sobic006G102900 Sobic001G078600 Sobic001G078600 Sobic007G154500--Sobic001G078600 Sobic007G154500--Sobic002G426800 Sobic002G146601 Sobic002G146601 Sobic007G154500--Sobic002G146601 Sobic007G154500--Sobic003G107200 Sobic006G116500 Sobic006G116500 Sobic007G154500--Sobic006G116500 Sobic007G154500--Sobic004G047100 Sobic001G261549 Sobic001G261549 Sobic007G154500--Sobic001G261549 Sobic004G285900 Sobic004G285900 Sobic007G154500--Sobic004G285900 Sobic006G102900--Sobic001G078600 Sobic006G102900--Sobic003G107200 Sobic009G181500 Sobic009G181500 Sobic006G102900--Sobic009G181500 Sobic006G102900--Sobic001G261549 Sobic006G102900--Sobic007G154500 Sobic006G102900--Sobic002G426800 Sobic010G274000 Sobic010G274000 Sobic006G102900--Sobic010G274000 Sobic006G102900--Sobic004G047100 Sobic009G189200 Sobic009G189200 Sobic006G102900--Sobic009G189200 Sobic004G331200--Sobic001G289900 Sobic004G331200--Sobic010G105400 Sobic004G331200--Sobic001G078600 Sobic001G528600 Sobic001G528600 Sobic004G331200--Sobic001G528600 Sobic006G191700 Sobic006G191700 Sobic004G331200--Sobic006G191700 Sobic001G468500 Sobic001G468500 Sobic004G331200--Sobic001G468500 Sobic003G444300 Sobic003G444300 Sobic004G331200--Sobic003G444300 Sobic004G331200--Sobic001G255600 Sobic008G096200 Sobic008G096200 Sobic004G331200--Sobic008G096200 Sobic002G289800--Sobic001G289900 Sobic007G017700 Sobic007G017700 Sobic002G289800--Sobic007G017700 Sobic003G316601 Sobic003G316601 Sobic002G289800--Sobic003G316601 Sobic004G237000 Sobic004G237000 Sobic002G289800--Sobic004G237000 Sobic004G327600 Sobic004G327600 Sobic002G289800--Sobic004G327600 Sobic002G289800--Sobic007G132900 Sobic002G289800--Sobic010G222100 Sobic001G300400 Sobic001G300400 Sobic002G289800--Sobic001G300400 Sobic006G081800 Sobic006G081800 Sobic002G289800--Sobic006G081800 Sobic003G107200--Sobic006G102900 Sobic002G246900 Sobic002G246900 Sobic003G107200--Sobic002G246900 Sobic003G107200--Sobic004G047100 Sobic003G107200--Sobic009G181500 Sobic003G107200--Sobic001G261549 Sobic003G107200--Sobic007G154500 Sobic003G107200--Sobic001G078600 Sobic002G236700 Sobic002G236700 Sobic003G107200--Sobic002G236700 Sobic003G107200--Sobic002G426800 Sobic002G426800--Sobic009G181500 Sobic002G426800--Sobic001G091500 Sobic005G144600 Sobic005G144600 Sobic002G426800--Sobic005G144600 Sobic002G426800--Sobic004G047100 Sobic003G260700 Sobic003G260700 Sobic002G426800--Sobic003G260700 Sobic002G426800--Sobic001G078600 Sobic003G314900 Sobic003G314900 Sobic002G426800--Sobic003G314900 Sobic003G444100 Sobic003G444100 Sobic002G426800--Sobic003G444100 Sobic002G426800--Sobic010G105400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.