Gene annotation
Transcriptome id Sobic.005G129700.1
Synonym Sb05g019130
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
sex determination protein tasselseed-2, putative, expressed
UniProt C5Y2W2
Pfam PF13561
Panther DB PTHR24322 PTHR24322:SF596
NCBI CDD KOG0725; Reductases with broad range of substrate specificities
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G26760 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os11g32030.1 : sex determination protein tasselseed-2, putative, expressed
MaizeGDB (Corn) Zm00025a029810
Brachypodium -
Barley HORVU2Hr1G021270.4 , HORVU2Hr1G021270.5 , HORVU2Hr1G021270.2 , HORVU2Hr1G021270.3 , HORVU2Hr1G021270.1
Wheat TraesCS2B02G143900 , TraesCS3A02G407100 , TraesCS2D02G124600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G033800 IF, putative, expressed -
2 Sobic.001G255600 endonuclease/Exonuclease/phosphatase family protein, expressed -
3 Sobic.010G227200 expressed protein -
4 Sobic.001G289900 AT hook motif domain containing protein, expressed -
5 Sobic.006G102900 expressed protein -
6 Sobic.010G222100 MBTB10 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
7 Sobic.010G191000 expressed protein -
8 Sobic.001G133300 LTPL90 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
9 Sobic.004G331200 expressed protein -
10 Sobic.009G157600 DUF740 domain containing protein, expressed -
11 Sobic.003G107200 SNF7 domain containing protein, putative, expressed K12198: CHMP5, charged multivesicular body protein 5
12 Sobic.002G392500 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
13 Sobic.009G194900 glucan endo-1,3-beta-glucosidase-like protein 3 precursor, putative, expressed -
14 Sobic.004G217450 - -
15 Sobic.006G133700 transcription factor RF2a, putative, expressed -
16 Sobic.003G279100 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
17 Sobic.002G246900 expressed protein -
18 Sobic.010G105400 chromosome condensation protein like, putative, expressed K06678: YCG1, condensin complex subunit 3
19 Sobic.001G078600 CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
20 Sobic.001G261549 - -


Gene co-expression network
sample Sobic005G129700 Sobic005G129700 Sobic009G033800 Sobic009G033800 Sobic005G129700--Sobic009G033800 Sobic001G255600 Sobic001G255600 Sobic005G129700--Sobic001G255600 Sobic010G227200 Sobic010G227200 Sobic005G129700--Sobic010G227200 Sobic001G289900 Sobic001G289900 Sobic005G129700--Sobic001G289900 Sobic006G102900 Sobic006G102900 Sobic005G129700--Sobic006G102900 Sobic010G222100 Sobic010G222100 Sobic005G129700--Sobic010G222100 Sobic010G191000 Sobic010G191000 Sobic005G129700--Sobic010G191000 Sobic001G133300 Sobic001G133300 Sobic005G129700--Sobic001G133300 Sobic004G331200 Sobic004G331200 Sobic005G129700--Sobic004G331200 Sobic009G033800--Sobic005G129700 Sobic009G033800--Sobic010G222100 Sobic009G033800--Sobic001G289900 Sobic007G154500 Sobic007G154500 Sobic009G033800--Sobic007G154500 Sobic009G033800--Sobic006G102900 Sobic009G033800--Sobic004G331200 Sobic002G289800 Sobic002G289800 Sobic009G033800--Sobic002G289800 Sobic003G107200 Sobic003G107200 Sobic009G033800--Sobic003G107200 Sobic002G426800 Sobic002G426800 Sobic009G033800--Sobic002G426800 Sobic002G230800 Sobic002G230800 Sobic001G255600--Sobic002G230800 Sobic001G255600--Sobic010G191000 Sobic002G246900 Sobic002G246900 Sobic001G255600--Sobic002G246900 Sobic010G105400 Sobic010G105400 Sobic001G255600--Sobic010G105400 Sobic004G047100 Sobic004G047100 Sobic001G255600--Sobic004G047100 Sobic001G169800 Sobic001G169800 Sobic001G255600--Sobic001G169800 Sobic001G255600--Sobic005G129700 Sobic001G255600--Sobic010G227200 Sobic002G236700 Sobic002G236700 Sobic001G255600--Sobic002G236700 Sobic006G138900 Sobic006G138900 Sobic010G227200--Sobic006G138900 Sobic009G157600 Sobic009G157600 Sobic010G227200--Sobic009G157600 Sobic002G392500 Sobic002G392500 Sobic010G227200--Sobic002G392500 Sobic006G124400 Sobic006G124400 Sobic010G227200--Sobic006G124400 Sobic010G227200--Sobic005G129700 Sobic010G227200--Sobic001G255600 Sobic004G273000 Sobic004G273000 Sobic010G227200--Sobic004G273000 Sobic010G227200--Sobic002G230800 Sobic010G227200--Sobic001G289900 Sobic001G289900--Sobic010G105400 Sobic001G289900--Sobic002G289800 Sobic007G132900 Sobic007G132900 Sobic001G289900--Sobic007G132900 Sobic003G387700 Sobic003G387700 Sobic001G289900--Sobic003G387700 Sobic001G289900--Sobic004G047100 Sobic001G398400 Sobic001G398400 Sobic001G289900--Sobic001G398400 Sobic001G289900--Sobic004G273000 Sobic001G091500 Sobic001G091500 Sobic001G289900--Sobic001G091500 Sobic001G289900--Sobic002G426800 Sobic001G078600 Sobic001G078600 Sobic006G102900--Sobic001G078600 Sobic006G102900--Sobic003G107200 Sobic009G181500 Sobic009G181500 Sobic006G102900--Sobic009G181500 Sobic001G261549 Sobic001G261549 Sobic006G102900--Sobic001G261549 Sobic006G102900--Sobic007G154500 Sobic006G102900--Sobic002G426800 Sobic010G274000 Sobic010G274000 Sobic006G102900--Sobic010G274000 Sobic006G102900--Sobic004G047100 Sobic009G189200 Sobic009G189200 Sobic006G102900--Sobic009G189200 Sobic010G222100--Sobic002G289800 Sobic010G222100--Sobic009G033800 Sobic002G353200 Sobic002G353200 Sobic010G222100--Sobic002G353200 Sobic010G215800 Sobic010G215800 Sobic010G222100--Sobic010G215800 Sobic010G222100--Sobic001G289900 Sobic001G505000 Sobic001G505000 Sobic010G222100--Sobic001G505000 Sobic010G222100--Sobic005G129700 Sobic010G222100--Sobic007G132900 Sobic003G279100 Sobic003G279100 Sobic010G222100--Sobic003G279100 Sobic003G179500 Sobic003G179500 Sobic010G191000--Sobic003G179500 Sobic010G191000--Sobic002G246900 Sobic010G191000--Sobic010G105400 Sobic010G191000--Sobic004G047100 Sobic010G051100 Sobic010G051100 Sobic010G191000--Sobic010G051100 Sobic010G191000--Sobic002G230800 Sobic005G144600 Sobic005G144600 Sobic010G191000--Sobic005G144600 Sobic010G191000--Sobic001G255600 Sobic010G191000--Sobic006G102900 Sobic001G133300--Sobic002G289800 Sobic001G133300--Sobic005G129700 Sobic002G227900 Sobic002G227900 Sobic001G133300--Sobic002G227900 Sobic001G133300--Sobic010G222100 Sobic001G133300--Sobic009G033800 Sobic001G496400 Sobic001G496400 Sobic001G133300--Sobic001G496400 Sobic001G133300--Sobic001G289900 Sobic009G087700 Sobic009G087700 Sobic001G133300--Sobic009G087700 Sobic007G017700 Sobic007G017700 Sobic001G133300--Sobic007G017700 Sobic004G331200--Sobic001G289900 Sobic004G331200--Sobic010G105400 Sobic004G331200--Sobic001G078600 Sobic001G528600 Sobic001G528600 Sobic004G331200--Sobic001G528600 Sobic006G191700 Sobic006G191700 Sobic004G331200--Sobic006G191700 Sobic001G468500 Sobic001G468500 Sobic004G331200--Sobic001G468500 Sobic003G444300 Sobic003G444300 Sobic004G331200--Sobic003G444300 Sobic004G331200--Sobic001G255600 Sobic008G096200 Sobic008G096200 Sobic004G331200--Sobic008G096200
Octagon: transcription factors


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