Gene annotation
Transcriptome id Sobic.009G194900.1
Synonym PDCB3, Sb09g025330
Functional annotation glucan endo-1,3-beta-glucosidase-like protein 3 precursor, putative, expressed
UniProt C5Z0W2
Pfam PF07983
Panther DB PTHR32227 PTHR32227:SF98
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G18650 : plasmodesmata callose-binding protein 3
RAP-DB (Rice) LOC_Os05g43690.1 : glucan endo-1,3-beta-glucosidase-like protein 3 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a037928 , Zm00025a044207
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G194900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G261549 - -
2 Sobic.002G351100 DNA repair protein Rad51, putative, expressed K04482: DNA repair protein RAD51
3 Sobic.006G102900 expressed protein -
4 Sobic.003G107200 SNF7 domain containing protein, putative, expressed K12198: CHMP5, charged multivesicular body protein 5
5 Sobic.001G255600 endonuclease/Exonuclease/phosphatase family protein, expressed -
6 Sobic.006G134200 expressed protein -
7 Sobic.002G230800 expressed protein -
8 Sobic.002G246900 expressed protein -
9 Sobic.004G047100 EH domain-containing protein 1, putative, expressed K12483: EH domain-containing protein 1
10 Sobic.002G162300 expressed protein K11270: chromosome transmission fidelity protein 8
11 Sobic.006G081800 histone H3, putative, expressed K11253: histone H3
12 Sobic.009G157600 DUF740 domain containing protein, expressed -
13 Sobic.001G300400 expansin precursor, putative, expressed -
14 Sobic.010G274000 cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
15 Sobic.001G078600 CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
16 Sobic.006G116500 expressed protein -
17 Sobic.004G279601 - K11254: histone H4
18 Sobic.004G285900 HMG1/2, putative, expressed -
19 Sobic.005G129700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@sex determination protein tasselseed-2, putative, expressed -
20 Sobic.010G177100 expressed protein -


Gene co-expression network
sample Sobic009G194900 Sobic009G194900 Sobic001G261549 Sobic001G261549 Sobic009G194900--Sobic001G261549 Sobic002G351100 Sobic002G351100 Sobic009G194900--Sobic002G351100 Sobic006G102900 Sobic006G102900 Sobic009G194900--Sobic006G102900 Sobic003G107200 Sobic003G107200 Sobic009G194900--Sobic003G107200 Sobic001G255600 Sobic001G255600 Sobic009G194900--Sobic001G255600 Sobic006G134200 Sobic006G134200 Sobic009G194900--Sobic006G134200 Sobic002G230800 Sobic002G230800 Sobic009G194900--Sobic002G230800 Sobic002G246900 Sobic002G246900 Sobic009G194900--Sobic002G246900 Sobic004G047100 Sobic004G047100 Sobic009G194900--Sobic004G047100 Sobic001G261549--Sobic006G102900 Sobic004G285900 Sobic004G285900 Sobic001G261549--Sobic004G285900 Sobic009G189200 Sobic009G189200 Sobic001G261549--Sobic009G189200 Sobic006G191700 Sobic006G191700 Sobic001G261549--Sobic006G191700 Sobic001G261549--Sobic009G194900 Sobic001G261549--Sobic003G107200 Sobic001G078600 Sobic001G078600 Sobic001G261549--Sobic001G078600 Sobic007G154500 Sobic007G154500 Sobic001G261549--Sobic007G154500 Sobic008G096200 Sobic008G096200 Sobic001G261549--Sobic008G096200 Sobic001G300400 Sobic001G300400 Sobic002G351100--Sobic001G300400 Sobic003G297200 Sobic003G297200 Sobic002G351100--Sobic003G297200 Sobic001G521100 Sobic001G521100 Sobic002G351100--Sobic001G521100 Sobic003G244000 Sobic003G244000 Sobic002G351100--Sobic003G244000 Sobic002G315400 Sobic002G315400 Sobic002G351100--Sobic002G315400 Sobic002G351100--Sobic009G194900 Sobic001G440900 Sobic001G440900 Sobic002G351100--Sobic001G440900 Sobic002G351100--Sobic002G246900 Sobic001G238900 Sobic001G238900 Sobic002G351100--Sobic001G238900 Sobic006G102900--Sobic001G078600 Sobic006G102900--Sobic003G107200 Sobic009G181500 Sobic009G181500 Sobic006G102900--Sobic009G181500 Sobic006G102900--Sobic001G261549 Sobic006G102900--Sobic007G154500 Sobic002G426800 Sobic002G426800 Sobic006G102900--Sobic002G426800 Sobic010G274000 Sobic010G274000 Sobic006G102900--Sobic010G274000 Sobic006G102900--Sobic004G047100 Sobic006G102900--Sobic009G189200 Sobic003G107200--Sobic006G102900 Sobic003G107200--Sobic002G246900 Sobic003G107200--Sobic004G047100 Sobic003G107200--Sobic009G181500 Sobic003G107200--Sobic001G261549 Sobic003G107200--Sobic007G154500 Sobic003G107200--Sobic001G078600 Sobic002G236700 Sobic002G236700 Sobic003G107200--Sobic002G236700 Sobic003G107200--Sobic002G426800 Sobic001G255600--Sobic002G230800 Sobic010G191000 Sobic010G191000 Sobic001G255600--Sobic010G191000 Sobic001G255600--Sobic002G246900 Sobic010G105400 Sobic010G105400 Sobic001G255600--Sobic010G105400 Sobic001G255600--Sobic004G047100 Sobic001G169800 Sobic001G169800 Sobic001G255600--Sobic001G169800 Sobic005G129700 Sobic005G129700 Sobic001G255600--Sobic005G129700 Sobic010G227200 Sobic010G227200 Sobic001G255600--Sobic010G227200 Sobic001G255600--Sobic002G236700 Sobic003G328500 Sobic003G328500 Sobic006G134200--Sobic003G328500 Sobic003G387700 Sobic003G387700 Sobic006G134200--Sobic003G387700 Sobic007G207700 Sobic007G207700 Sobic006G134200--Sobic007G207700 Sobic004G257600 Sobic004G257600 Sobic006G134200--Sobic004G257600 Sobic007G100600 Sobic007G100600 Sobic006G134200--Sobic007G100600 Sobic001G075400 Sobic001G075400 Sobic006G134200--Sobic001G075400 Sobic001G177900 Sobic001G177900 Sobic006G134200--Sobic001G177900 Sobic006G134200--Sobic010G105400 Sobic005G144600 Sobic005G144600 Sobic006G134200--Sobic005G144600 Sobic002G230800--Sobic001G238900 Sobic002G230800--Sobic010G105400 Sobic006G124400 Sobic006G124400 Sobic002G230800--Sobic006G124400 Sobic001G054700 Sobic001G054700 Sobic002G230800--Sobic001G054700 Sobic003G179500 Sobic003G179500 Sobic002G230800--Sobic003G179500 Sobic009G109300 Sobic009G109300 Sobic002G230800--Sobic009G109300 Sobic007G218100 Sobic007G218100 Sobic002G230800--Sobic007G218100 Sobic002G230800--Sobic002G246900 Sobic002G230800--Sobic003G244000 Sobic002G246900--Sobic004G047100 Sobic002G246900--Sobic010G105400 Sobic002G246900--Sobic010G191000 Sobic002G246900--Sobic003G107200 Sobic002G246900--Sobic001G238900 Sobic002G246900--Sobic009G181500 Sobic002G246900--Sobic002G236700 Sobic002G246900--Sobic001G169800 Sobic002G246900--Sobic002G230800 Sobic004G047100--Sobic010G105400 Sobic004G047100--Sobic005G144600 Sobic004G047100--Sobic009G181500 Sobic004G047100--Sobic002G246900 Sobic004G047100--Sobic002G426800 Sobic004G047100--Sobic003G179500 Sobic001G091500 Sobic001G091500 Sobic004G047100--Sobic001G091500 Sobic006G116500 Sobic006G116500 Sobic004G047100--Sobic006G116500 Sobic004G047100--Sobic003G387700
Octagon: transcription factors


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