Gene annotation
Transcriptome id Sobic.006G133700.1
Synonym Sb06g021350
Functional annotation transcription factor RF2a, putative, expressed
UniProt C5YBG0
Pfam PF07716
Panther DB PTHR13690 PTHR13690:SF79
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT2G31370 : Basic-leucine zipper (bZIP) transcription factor family protein
RAP-DB (Rice) LOC_Os04g41820.1 : transcription factor RF2a, putative, expressed
MaizeGDB (Corn) Zm00025a010833
Brachypodium PNT61376 , KQJ83358
Barley HORVU2Hr1G085560.4 , HORVU2Hr1G085560.5 , HORVU2Hr1G085560.6
Wheat TraesCS2A02G352100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G030400 protein kinase family protein, putative, expressed -
2 Sobic.001G468500 ethylene-responsive element-binding protein, putative, expressed -
3 Sobic.001G080200 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.003G283600 HVA22, putative, expressed -
5 Sobic.004G036800 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
6 Sobic.005G129700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@sex determination protein tasselseed-2, putative, expressed -
7 Sobic.001G081100 OsSub31 - Putative Subtilisin homologue, expressed -
8 Sobic.001G369800 monocopper oxidase, putative, expressed -
9 Sobic.002G284100 ATROPGEF7/ROPGEF7, putative, expressed -
10 Sobic.010G003300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
11 Sobic.006G267800 WD-40 repeat family protein, putative, expressed -
12 Sobic.002G351100 DNA repair protein Rad51, putative, expressed K04482: DNA repair protein RAD51
13 Sobic.002G353200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsBZR1(Ortholog in rice:Zhu et al. (2015))(PubMedID : 31659861)@BES1/BZR1 homolog protein, putative, expressed K14503: brassinosteroid resistant 1/2
14 Sobic.009G064900 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
15 Sobic.001G336050 - K18635: protein SPIRAL1 and related proteins
16 Sobic.002G253900 growth regulator related protein, putative, expressed -
17 Sobic.002G315400 expressed protein -
18 Sobic.002G179150 - -
19 Sobic.002G051200 PHF5-like protein domain containing protein, expressed K12834: PHD finger-like domain-containing protein 5A
20 Sobic.002G302600 OsFBX291 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic006G133700 Sobic006G133700 Sobic001G030400 Sobic001G030400 Sobic006G133700--Sobic001G030400 Sobic001G468500 Sobic001G468500 Sobic006G133700--Sobic001G468500 Sobic001G080200 Sobic001G080200 Sobic006G133700--Sobic001G080200 Sobic003G283600 Sobic003G283600 Sobic006G133700--Sobic003G283600 Sobic004G036800 Sobic004G036800 Sobic006G133700--Sobic004G036800 Sobic005G129700 Sobic005G129700 Sobic006G133700--Sobic005G129700 Sobic001G081100 Sobic001G081100 Sobic006G133700--Sobic001G081100 Sobic001G369800 Sobic001G369800 Sobic006G133700--Sobic001G369800 Sobic002G284100 Sobic002G284100 Sobic006G133700--Sobic002G284100 Sobic001G030400--Sobic006G133700 Sobic001G030400--Sobic001G468500 Sobic003G084300 Sobic003G084300 Sobic001G030400--Sobic003G084300 Sobic002G247800 Sobic002G247800 Sobic001G030400--Sobic002G247800 Sobic009G165500 Sobic009G165500 Sobic001G030400--Sobic009G165500 Sobic010G222100 Sobic010G222100 Sobic001G030400--Sobic010G222100 Sobic007G009000 Sobic007G009000 Sobic001G030400--Sobic007G009000 Sobic004G331200 Sobic004G331200 Sobic001G030400--Sobic004G331200 Sobic002G353200 Sobic002G353200 Sobic001G030400--Sobic002G353200 Sobic001G468500--Sobic003G283600 Sobic003G003700 Sobic003G003700 Sobic001G468500--Sobic003G003700 Sobic004G286700 Sobic004G286700 Sobic001G468500--Sobic004G286700 Sobic010G277300 Sobic010G277300 Sobic001G468500--Sobic010G277300 Sobic001G468500--Sobic006G133700 Sobic001G468500--Sobic001G030400 Sobic002G238500 Sobic002G238500 Sobic001G468500--Sobic002G238500 Sobic001G468500--Sobic004G036800 Sobic001G468500--Sobic004G331200 Sobic001G080200--Sobic003G283600 Sobic001G123100 Sobic001G123100 Sobic001G080200--Sobic001G123100 Sobic001G080200--Sobic006G133700 Sobic001G452900 Sobic001G452900 Sobic001G080200--Sobic001G452900 Sobic001G083500 Sobic001G083500 Sobic001G080200--Sobic001G083500 Sobic002G337600 Sobic002G337600 Sobic001G080200--Sobic002G337600 Sobic010G241100 Sobic010G241100 Sobic001G080200--Sobic010G241100 Sobic010G086000 Sobic010G086000 Sobic001G080200--Sobic010G086000 Sobic001G080200--Sobic002G284100 Sobic001G290500 Sobic001G290500 Sobic003G283600--Sobic001G290500 Sobic003G345000 Sobic003G345000 Sobic003G283600--Sobic003G345000 Sobic003G283600--Sobic001G468500 Sobic010G003300 Sobic010G003300 Sobic003G283600--Sobic010G003300 Sobic006G142500 Sobic006G142500 Sobic003G283600--Sobic006G142500 Sobic001G296100 Sobic001G296100 Sobic003G283600--Sobic001G296100 Sobic003G283600--Sobic001G369800 Sobic001G540700 Sobic001G540700 Sobic003G283600--Sobic001G540700 Sobic003G283600--Sobic010G086000 Sobic004G343600 Sobic004G343600 Sobic004G036800--Sobic004G343600 Sobic004G036800--Sobic001G468500 Sobic004G036800--Sobic006G133700 Sobic001G412500 Sobic001G412500 Sobic004G036800--Sobic001G412500 Sobic007G129000 Sobic007G129000 Sobic004G036800--Sobic007G129000 Sobic010G256200 Sobic010G256200 Sobic004G036800--Sobic010G256200 Sobic004G036800--Sobic001G369800 Sobic001G040300 Sobic001G040300 Sobic004G036800--Sobic001G040300 Sobic010G265900 Sobic010G265900 Sobic004G036800--Sobic010G265900 Sobic009G033800 Sobic009G033800 Sobic005G129700--Sobic009G033800 Sobic001G255600 Sobic001G255600 Sobic005G129700--Sobic001G255600 Sobic010G227200 Sobic010G227200 Sobic005G129700--Sobic010G227200 Sobic001G289900 Sobic001G289900 Sobic005G129700--Sobic001G289900 Sobic006G102900 Sobic006G102900 Sobic005G129700--Sobic006G102900 Sobic005G129700--Sobic010G222100 Sobic010G191000 Sobic010G191000 Sobic005G129700--Sobic010G191000 Sobic001G133300 Sobic001G133300 Sobic005G129700--Sobic001G133300 Sobic005G129700--Sobic004G331200 Sobic010G261000 Sobic010G261000 Sobic001G081100--Sobic010G261000 Sobic001G123300 Sobic001G123300 Sobic001G081100--Sobic001G123300 Sobic003G208800 Sobic003G208800 Sobic001G081100--Sobic003G208800 Sobic002G213500 Sobic002G213500 Sobic001G081100--Sobic002G213500 Sobic001G154400 Sobic001G154400 Sobic001G081100--Sobic001G154400 Sobic001G081100--Sobic006G133700 Sobic004G145300 Sobic004G145300 Sobic001G081100--Sobic004G145300 Sobic006G263400 Sobic006G263400 Sobic001G081100--Sobic006G263400 Sobic001G081100--Sobic001G080200 Sobic001G369800--Sobic002G284100 Sobic001G487200 Sobic001G487200 Sobic001G369800--Sobic001G487200 Sobic001G369800--Sobic001G123100 Sobic001G369800--Sobic001G540700 Sobic006G218900 Sobic006G218900 Sobic001G369800--Sobic006G218900 Sobic009G212100 Sobic009G212100 Sobic001G369800--Sobic009G212100 Sobic001G369800--Sobic003G283600 Sobic003G351900 Sobic003G351900 Sobic001G369800--Sobic003G351900 Sobic001G212600 Sobic001G212600 Sobic001G369800--Sobic001G212600 Sobic006G272800 Sobic006G272800 Sobic002G284100--Sobic006G272800 Sobic004G267600 Sobic004G267600 Sobic002G284100--Sobic004G267600 Sobic002G027600 Sobic002G027600 Sobic002G284100--Sobic002G027600 Sobic002G284100--Sobic001G369800 Sobic002G284100--Sobic001G123100 Sobic002G284100--Sobic001G540700 Sobic002G284100--Sobic010G086000 Sobic009G172950 Sobic009G172950 Sobic002G284100--Sobic009G172950 Sobic002G284100--Sobic006G142500
Octagon: transcription factors


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