Gene annotation
Transcriptome id Sobic.001G336050.1
Synonym -
Functional annotation -
UniProt A0A1B6QP01
Pfam -
Panther DB PTHR33403
NCBI CDD -
KEGG Orthology K18635; protein SPIRAL1 and related proteins
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G26355 : SPIRAL1-like1
RAP-DB (Rice) LOC_Os03g30430.1 : nitrilase-associated protein, putative, expressed
MaizeGDB (Corn) Zm00025a052185 , Zm00025a002879
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G154400 expp1 protein precursor, putative, expressed -
2 Sobic.001G517600 ribosomal L18p/L5e family protein, putative, expressed K02932: RP-L5e, large subunit ribosomal protein L5e
3 Sobic.006G108600 prohibitin, putative, expressed K17080: prohibitin 1
4 Sobic.004G032000 peptidase, T1 family, putative, expressed K02725: 20S proteasome subunit alpha 6
5 Sobic.003G289601 - -
6 Sobic.002G304400 expressed protein -
7 Sobic.007G134800 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
8 Sobic.003G072900 OsRhmbd18 - Putative Rhomboid homologue, expressed -
9 Sobic.003G300900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
10 Sobic.001G501600 acetyltransferase, GNAT family, putative, expressed -
11 Sobic.002G236700 TMV-MP30 binding protein 2C, putative, expressed -
12 Sobic.001G162800 expressed protein -
13 Sobic.002G054000 ribosomal protein L4, putative, expressed K02930: RP-L4e, large subunit ribosomal protein L4e
14 Sobic.007G029400 60S acidic ribosomal protein P0, putative, expressed K02941: RP-LP0, large subunit ribosomal protein LP0
15 Sobic.009G169200 outer membrane protein, OMP85 family protein, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
16 Sobic.006G143500 expressed protein -
17 Sobic.002G315400 expressed protein -
18 Sobic.006G013900 RNA polymerase subunit, putative, expressed K03008: RPB11, DNA-directed RNA polymerase II subunit RPB11
19 Sobic.001G399300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphotase protein, putative, expressed -
20 Sobic.007G022500 RNA recognition motif containing protein, putative, expressed K03248: translation initiation factor 3 subunit G


Gene co-expression network
sample Sobic001G336050 Sobic001G336050 Sobic001G154400 Sobic001G154400 Sobic001G336050--Sobic001G154400 Sobic001G517600 Sobic001G517600 Sobic001G336050--Sobic001G517600 Sobic006G108600 Sobic006G108600 Sobic001G336050--Sobic006G108600 Sobic004G032000 Sobic004G032000 Sobic001G336050--Sobic004G032000 Sobic003G289601 Sobic003G289601 Sobic001G336050--Sobic003G289601 Sobic002G304400 Sobic002G304400 Sobic001G336050--Sobic002G304400 Sobic007G134800 Sobic007G134800 Sobic001G336050--Sobic007G134800 Sobic003G072900 Sobic003G072900 Sobic001G336050--Sobic003G072900 Sobic003G300900 Sobic003G300900 Sobic001G336050--Sobic003G300900 Sobic002G113500 Sobic002G113500 Sobic001G154400--Sobic002G113500 Sobic006G013900 Sobic006G013900 Sobic001G154400--Sobic006G013900 Sobic001G154400--Sobic001G336050 Sobic004G102900 Sobic004G102900 Sobic001G154400--Sobic004G102900 Sobic004G318400 Sobic004G318400 Sobic001G154400--Sobic004G318400 Sobic002G051200 Sobic002G051200 Sobic001G154400--Sobic002G051200 Sobic004G063500 Sobic004G063500 Sobic001G154400--Sobic004G063500 Sobic010G256200 Sobic010G256200 Sobic001G154400--Sobic010G256200 Sobic003G325700 Sobic003G325700 Sobic001G154400--Sobic003G325700 Sobic001G436200 Sobic001G436200 Sobic001G517600--Sobic001G436200 Sobic002G373800 Sobic002G373800 Sobic001G517600--Sobic002G373800 Sobic003G109600 Sobic003G109600 Sobic001G517600--Sobic003G109600 Sobic001G517600--Sobic004G032000 Sobic002G406500 Sobic002G406500 Sobic001G517600--Sobic002G406500 Sobic005G050500 Sobic005G050500 Sobic001G517600--Sobic005G050500 Sobic002G379500 Sobic002G379500 Sobic001G517600--Sobic002G379500 Sobic008G098800 Sobic008G098800 Sobic001G517600--Sobic008G098800 Sobic006G138100 Sobic006G138100 Sobic001G517600--Sobic006G138100 Sobic007G029400 Sobic007G029400 Sobic006G108600--Sobic007G029400 Sobic010G054200 Sobic010G054200 Sobic006G108600--Sobic010G054200 Sobic008G135000 Sobic008G135000 Sobic006G108600--Sobic008G135000 Sobic010G005300 Sobic010G005300 Sobic006G108600--Sobic010G005300 Sobic010G076400 Sobic010G076400 Sobic006G108600--Sobic010G076400 Sobic008G094600 Sobic008G094600 Sobic006G108600--Sobic008G094600 Sobic001G162800 Sobic001G162800 Sobic006G108600--Sobic001G162800 Sobic009G233400 Sobic009G233400 Sobic006G108600--Sobic009G233400 Sobic006G108600--Sobic004G032000 Sobic004G032000--Sobic001G517600 Sobic003G129800 Sobic003G129800 Sobic004G032000--Sobic003G129800 Sobic005G111100 Sobic005G111100 Sobic004G032000--Sobic005G111100 Sobic001G128400 Sobic001G128400 Sobic004G032000--Sobic001G128400 Sobic009G223300 Sobic009G223300 Sobic004G032000--Sobic009G223300 Sobic009G191200 Sobic009G191200 Sobic004G032000--Sobic009G191200 Sobic004G032000--Sobic008G135000 Sobic004G032000--Sobic003G109600 Sobic004G032000--Sobic005G050500 Sobic006G261900 Sobic006G261900 Sobic003G289601--Sobic006G261900 Sobic007G184001 Sobic007G184001 Sobic003G289601--Sobic007G184001 Sobic001G047800 Sobic001G047800 Sobic003G289601--Sobic001G047800 Sobic006G262300 Sobic006G262300 Sobic003G289601--Sobic006G262300 Sobic003G296800 Sobic003G296800 Sobic003G289601--Sobic003G296800 Sobic009G173500 Sobic009G173500 Sobic003G289601--Sobic009G173500 Sobic002G329900 Sobic002G329900 Sobic003G289601--Sobic002G329900 Sobic003G289601--Sobic009G223300 Sobic002G309700 Sobic002G309700 Sobic003G289601--Sobic002G309700 Sobic001G413100 Sobic001G413100 Sobic002G304400--Sobic001G413100 Sobic008G118300 Sobic008G118300 Sobic002G304400--Sobic008G118300 Sobic004G069400 Sobic004G069400 Sobic002G304400--Sobic004G069400 Sobic007G112100 Sobic007G112100 Sobic002G304400--Sobic007G112100 Sobic001G286100 Sobic001G286100 Sobic002G304400--Sobic001G286100 Sobic001G167500 Sobic001G167500 Sobic002G304400--Sobic001G167500 Sobic002G304400--Sobic001G336050 Sobic001G521100 Sobic001G521100 Sobic002G304400--Sobic001G521100 Sobic001G081900 Sobic001G081900 Sobic002G304400--Sobic001G081900 Sobic001G397000 Sobic001G397000 Sobic007G134800--Sobic001G397000 Sobic007G134800--Sobic003G300900 Sobic001G410200 Sobic001G410200 Sobic007G134800--Sobic001G410200 Sobic002G101000 Sobic002G101000 Sobic007G134800--Sobic002G101000 Sobic007G134800--Sobic007G112100 Sobic003G179000 Sobic003G179000 Sobic007G134800--Sobic003G179000 Sobic007G134800--Sobic007G029400 Sobic007G134800--Sobic001G336050 Sobic007G079600 Sobic007G079600 Sobic007G134800--Sobic007G079600 Sobic009G189200 Sobic009G189200 Sobic003G072900--Sobic009G189200 Sobic002G236700 Sobic002G236700 Sobic003G072900--Sobic002G236700 Sobic010G144900 Sobic010G144900 Sobic003G072900--Sobic010G144900 Sobic003G072900--Sobic001G336050 Sobic006G120700 Sobic006G120700 Sobic003G072900--Sobic006G120700 Sobic003G122200 Sobic003G122200 Sobic003G072900--Sobic003G122200 Sobic003G396600 Sobic003G396600 Sobic003G072900--Sobic003G396600 Sobic003G084300 Sobic003G084300 Sobic003G072900--Sobic003G084300 Sobic009G111400 Sobic009G111400 Sobic003G072900--Sobic009G111400 Sobic008G170500 Sobic008G170500 Sobic003G300900--Sobic008G170500 Sobic010G190300 Sobic010G190300 Sobic003G300900--Sobic010G190300 Sobic008G135500 Sobic008G135500 Sobic003G300900--Sobic008G135500 Sobic003G128700 Sobic003G128700 Sobic003G300900--Sobic003G128700 Sobic003G300900--Sobic001G410200 Sobic006G200000 Sobic006G200000 Sobic003G300900--Sobic006G200000 Sobic003G300900--Sobic001G397000 Sobic006G245500 Sobic006G245500 Sobic003G300900--Sobic006G245500 Sobic010G090100 Sobic010G090100 Sobic003G300900--Sobic010G090100
Octagon: transcription factors


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