Gene annotation
Transcriptome id Sobic.003G289601.1
Synonym -
Functional annotation -
UniProt A0A1W0VZD9
Pfam -
Panther DB PTHR33156 PTHR33156:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G20585 : nuclear fusion defective 6
RAP-DB (Rice) LOC_Os01g53620.1 : expressed protein
MaizeGDB (Corn) Zm00025a027675
Brachypodium KQK09628
Barley HORVU3Hr1G070070.1 , HORVU3Hr1G070090.1 , HORVU3Hr1G070090.4 , HORVU3Hr1G070090.6 , HORVU3Hr1G070090.2
Wheat TraesCS3D02G278600 , TraesCS3A02G278300 , TraesCS3B02G312500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G261900 expressed protein -
2 Sobic.007G184001 - K06688: UBE2C, ubiquitin-conjugating enzyme E2 C
3 Sobic.001G047800 cytochrome b-c1 complex subunit 7, putative, expressed K00417: QCR7, ubiquinol-cytochrome c reductase subunit 7
4 Sobic.006G262300 expressed protein -
5 Sobic.003G296800 expressed protein -
6 Sobic.009G173500 40S ribosomal protein S26, putative, expressed K02976: RP-S26e, small subunit ribosomal protein S26e
7 Sobic.002G329900 core histone H2A/H2B/H3/H4, putative, expressed K11251: histone H2A
8 Sobic.009G223300 WD repeat-containing protein, putative, expressed K14753: guanine nucleotide-binding protein subunit beta-2-like 1 protein
9 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta
10 Sobic.004G055700 -(PubMedID : 26976818)@glycine cleavage system H protein, putative, expressed K02437: gcvH, glycine cleavage system H protein
11 Sobic.004G259200 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
12 Sobic.007G134900 expressed protein -
13 Sobic.001G404800 CHCH domain containing protein, expressed K03952: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8
14 Sobic.005G113300 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
15 Sobic.001G197000 dehydration response related protein, putative, expressed -
16 Sobic.002G379500 40S ribosomal protein S6, putative, expressed K02991: RP-S6e, small subunit ribosomal protein S6e
17 Sobic.003G109600 40S ribosomal protein S5, putative, expressed K02989: RP-S5e, small subunit ribosomal protein S5e
18 Sobic.002G263100 ferredoxin 1-like isoform 1, putative, expressed -
19 Sobic.002G135200 ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
20 Sobic.003G436700 40S ribosomal protein S10, putative, expressed K02947: RP-S10e, small subunit ribosomal protein S10e


Gene co-expression network
sample Sobic003G289601 Sobic003G289601 Sobic006G261900 Sobic006G261900 Sobic003G289601--Sobic006G261900 Sobic007G184001 Sobic007G184001 Sobic003G289601--Sobic007G184001 Sobic001G047800 Sobic001G047800 Sobic003G289601--Sobic001G047800 Sobic006G262300 Sobic006G262300 Sobic003G289601--Sobic006G262300 Sobic003G296800 Sobic003G296800 Sobic003G289601--Sobic003G296800 Sobic009G173500 Sobic009G173500 Sobic003G289601--Sobic009G173500 Sobic002G329900 Sobic002G329900 Sobic003G289601--Sobic002G329900 Sobic009G223300 Sobic009G223300 Sobic003G289601--Sobic009G223300 Sobic002G309700 Sobic002G309700 Sobic003G289601--Sobic002G309700 Sobic006G261900--Sobic006G262300 Sobic003G436700 Sobic003G436700 Sobic006G261900--Sobic003G436700 Sobic002G379500 Sobic002G379500 Sobic006G261900--Sobic002G379500 Sobic003G109600 Sobic003G109600 Sobic006G261900--Sobic003G109600 Sobic010G251600 Sobic010G251600 Sobic006G261900--Sobic010G251600 Sobic006G213000 Sobic006G213000 Sobic006G261900--Sobic006G213000 Sobic002G081600 Sobic002G081600 Sobic006G261900--Sobic002G081600 Sobic006G261900--Sobic009G173500 Sobic001G016500 Sobic001G016500 Sobic006G261900--Sobic001G016500 Sobic007G184001--Sobic003G289601 Sobic001G031800 Sobic001G031800 Sobic007G184001--Sobic001G031800 Sobic007G184001--Sobic002G329900 Sobic009G209001 Sobic009G209001 Sobic007G184001--Sobic009G209001 Sobic007G184001--Sobic001G047800 Sobic002G263100 Sobic002G263100 Sobic007G184001--Sobic002G263100 Sobic004G260200 Sobic004G260200 Sobic007G184001--Sobic004G260200 Sobic007G184001--Sobic002G309700 Sobic007G184001--Sobic003G296800 Sobic001G047800--Sobic002G309700 Sobic003G215700 Sobic003G215700 Sobic001G047800--Sobic003G215700 Sobic002G418400 Sobic002G418400 Sobic001G047800--Sobic002G418400 Sobic001G047800--Sobic004G260200 Sobic001G404800 Sobic001G404800 Sobic001G047800--Sobic001G404800 Sobic001G047800--Sobic002G263100 Sobic004G060500 Sobic004G060500 Sobic001G047800--Sobic004G060500 Sobic007G134900 Sobic007G134900 Sobic001G047800--Sobic007G134900 Sobic001G519000 Sobic001G519000 Sobic001G047800--Sobic001G519000 Sobic006G262300--Sobic006G261900 Sobic002G375100 Sobic002G375100 Sobic006G262300--Sobic002G375100 Sobic001G432000 Sobic001G432000 Sobic006G262300--Sobic001G432000 Sobic006G262300--Sobic010G251600 Sobic006G262300--Sobic003G296800 Sobic006G262300--Sobic002G081600 Sobic006G116700 Sobic006G116700 Sobic006G262300--Sobic006G116700 Sobic006G262300--Sobic003G436700 Sobic001G533500 Sobic001G533500 Sobic006G262300--Sobic001G533500 Sobic003G296800--Sobic001G047800 Sobic003G296800--Sobic003G215700 Sobic003G296800--Sobic002G263100 Sobic002G296200 Sobic002G296200 Sobic003G296800--Sobic002G296200 Sobic004G183200 Sobic004G183200 Sobic003G296800--Sobic004G183200 Sobic003G296800--Sobic001G404800 Sobic003G296800--Sobic006G262300 Sobic003G296800--Sobic002G309700 Sobic003G296800--Sobic004G060500 Sobic001G039400 Sobic001G039400 Sobic009G173500--Sobic001G039400 Sobic001G226500 Sobic001G226500 Sobic009G173500--Sobic001G226500 Sobic009G233400 Sobic009G233400 Sobic009G173500--Sobic009G233400 Sobic009G173500--Sobic009G223300 Sobic009G173500--Sobic003G109600 Sobic003G078200 Sobic003G078200 Sobic009G173500--Sobic003G078200 Sobic003G249700 Sobic003G249700 Sobic009G173500--Sobic003G249700 Sobic009G179100 Sobic009G179100 Sobic009G173500--Sobic009G179100 Sobic010G070500 Sobic010G070500 Sobic009G173500--Sobic010G070500 Sobic002G329900--Sobic001G047800 Sobic001G110000 Sobic001G110000 Sobic002G329900--Sobic001G110000 Sobic002G329900--Sobic001G404800 Sobic002G329900--Sobic002G263100 Sobic002G329900--Sobic003G215700 Sobic001G197000 Sobic001G197000 Sobic002G329900--Sobic001G197000 Sobic002G329900--Sobic001G519000 Sobic008G006300 Sobic008G006300 Sobic002G329900--Sobic008G006300 Sobic002G348100 Sobic002G348100 Sobic002G329900--Sobic002G348100 Sobic009G223300--Sobic003G109600 Sobic002G372400 Sobic002G372400 Sobic009G223300--Sobic002G372400 Sobic009G223300--Sobic002G379500 Sobic007G018300 Sobic007G018300 Sobic009G223300--Sobic007G018300 Sobic010G230700 Sobic010G230700 Sobic009G223300--Sobic010G230700 Sobic010G076400 Sobic010G076400 Sobic009G223300--Sobic010G076400 Sobic004G198400 Sobic004G198400 Sobic009G223300--Sobic004G198400 Sobic009G223300--Sobic009G233400 Sobic009G223300--Sobic001G039400 Sobic002G309700--Sobic004G260200 Sobic002G309700--Sobic001G047800 Sobic002G356400 Sobic002G356400 Sobic002G309700--Sobic002G356400 Sobic009G215300 Sobic009G215300 Sobic002G309700--Sobic009G215300 Sobic002G309700--Sobic001G404800 Sobic001G074700 Sobic001G074700 Sobic002G309700--Sobic001G074700 Sobic002G309700--Sobic002G296200 Sobic001G465800 Sobic001G465800 Sobic002G309700--Sobic001G465800 Sobic002G309700--Sobic003G215700
Octagon: transcription factors


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