Gene annotation
Transcriptome id Sobic.007G134800.1
Synonym Sb07g021070, PLE2, LTA2
Functional annotation 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed
UniProt C5YL64
Pfam PF02817 PF00364 PF00198
Panther DB PTHR23151 PTHR23151:SF67
NCBI CDD KOG0557; Dihydrolipoamide acetyltransferase
KEGG Orthology K00627; DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
Gene Ontology GO:0016746; transferase activity, transferring acyl groups GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT3G25860 : 2-oxoacid dehydrogenases acyltransferase family protein
RAP-DB (Rice) LOC_Os08g33440.1 : 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a054088 , Zm00025a025701 , Zm00025a031110 , Zm00025a005973
Brachypodium KQJ91987 , KQJ98373
Barley HORVU5Hr1G112850.10 , HORVU5Hr1G112850.1 , HORVU5Hr1G112850.2 , HORVU5Hr1G112850.3 , HORVU5Hr1G112850.4 , HORVU5Hr1G112850.5 , HORVU5Hr1G112850.6 , HORVU5Hr1G112850.7 , HORVU5Hr1G112850.8 , HORVU5Hr1G112850.9 , HORVU5Hr1G061140.3 , HORVU5Hr1G061140.2 , HORVU5Hr1G061140.1
Wheat TraesCS5A02G119600 , TraesCS5A02G476700 , TraesCS5B02G116300 , TraesCS5D02G490000 , TraesCS5D02G126000 , TraesCS5B02G489600 , TraesCS5A02G206600 , TraesCS5A02G206600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G397000 argininosuccinate lyase, putative, expressed K01755: argH, argininosuccinate lyase
2 Sobic.003G300900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
3 Sobic.001G410200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@OsAPx1 - Cytosolic Ascorbate Peroxidase encoding gene 1-8, expressed K00434: L-ascorbate peroxidase
4 Sobic.002G101000 mitochondrial prohibitin complex protein 2, putative, expressed K17081: prohibitin 2
5 Sobic.007G112100 enoyl-acyl-carrier-protein reductase NADH, chloroplast precursor, expressed K00208: enoyl-[acyl-carrier protein] reductase I
6 Sobic.003G179000 dienelactone hydrolase family protein, expressed K01061: carboxymethylenebutenolidase
7 Sobic.007G029400 60S acidic ribosomal protein P0, putative, expressed K02941: RP-LP0, large subunit ribosomal protein LP0
8 Sobic.001G336050 - K18635: protein SPIRAL1 and related proteins
9 Sobic.007G079600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FabA-like domain containing protein, expressed K02372: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
10 Sobic.001G501600 acetyltransferase, GNAT family, putative, expressed -
11 Sobic.010G090100 phosphoglycerate mutase, putative, expressed K01834: PGAM, 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
12 Sobic.003G340100 "domain confirmed by Pfam database, expressed in leaf, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
13 Sobic.002G054000 ribosomal protein L4, putative, expressed K02930: RP-L4e, large subunit ribosomal protein L4e
14 Sobic.009G088200 -(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
15 Sobic.002G304400 expressed protein -
16 Sobic.002G186900 enolase, putative, expressed K01689: ENO, enolase
17 Sobic.010G144900 fiber protein Fb34, putative, expressed -
18 Sobic.007G171200 dihydrodipicolinate reductase, putative, expressed K00215: 4-hydroxy-tetrahydrodipicolinate reductase
19 Sobic.006G120700 N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase, putative, expressed K03434: N-acetylglucosaminylphosphatidylinositol deacetylase
20 Sobic.007G220900 ribosomal L9, putative, expressed K02939: RP-L9, MRPL9, large subunit ribosomal protein L9


Gene co-expression network
sample Sobic007G134800 Sobic007G134800 Sobic001G397000 Sobic001G397000 Sobic007G134800--Sobic001G397000 Sobic003G300900 Sobic003G300900 Sobic007G134800--Sobic003G300900 Sobic001G410200 Sobic001G410200 Sobic007G134800--Sobic001G410200 Sobic002G101000 Sobic002G101000 Sobic007G134800--Sobic002G101000 Sobic007G112100 Sobic007G112100 Sobic007G134800--Sobic007G112100 Sobic003G179000 Sobic003G179000 Sobic007G134800--Sobic003G179000 Sobic007G029400 Sobic007G029400 Sobic007G134800--Sobic007G029400 Sobic001G336050 Sobic001G336050 Sobic007G134800--Sobic001G336050 Sobic007G079600 Sobic007G079600 Sobic007G134800--Sobic007G079600 Sobic001G371100 Sobic001G371100 Sobic001G397000--Sobic001G371100 Sobic001G397000--Sobic003G300900 Sobic003G396600 Sobic003G396600 Sobic001G397000--Sobic003G396600 Sobic001G397000--Sobic007G134800 Sobic010G144900 Sobic010G144900 Sobic001G397000--Sobic010G144900 Sobic008G100700 Sobic008G100700 Sobic001G397000--Sobic008G100700 Sobic001G081900 Sobic001G081900 Sobic001G397000--Sobic001G081900 Sobic001G397000--Sobic002G101000 Sobic001G228200 Sobic001G228200 Sobic001G397000--Sobic001G228200 Sobic008G170500 Sobic008G170500 Sobic003G300900--Sobic008G170500 Sobic010G190300 Sobic010G190300 Sobic003G300900--Sobic010G190300 Sobic008G135500 Sobic008G135500 Sobic003G300900--Sobic008G135500 Sobic003G128700 Sobic003G128700 Sobic003G300900--Sobic003G128700 Sobic003G300900--Sobic001G410200 Sobic006G200000 Sobic006G200000 Sobic003G300900--Sobic006G200000 Sobic003G300900--Sobic001G397000 Sobic006G245500 Sobic006G245500 Sobic003G300900--Sobic006G245500 Sobic010G090100 Sobic010G090100 Sobic003G300900--Sobic010G090100 Sobic001G410200--Sobic010G190300 Sobic001G410200--Sobic003G300900 Sobic001G410200--Sobic006G200000 Sobic001G410200--Sobic007G029400 Sobic003G410500 Sobic003G410500 Sobic001G410200--Sobic003G410500 Sobic005G113300 Sobic005G113300 Sobic001G410200--Sobic005G113300 Sobic003G333800 Sobic003G333800 Sobic001G410200--Sobic003G333800 Sobic002G379600 Sobic002G379600 Sobic001G410200--Sobic002G379600 Sobic009G212400 Sobic009G212400 Sobic001G410200--Sobic009G212400 Sobic009G104100 Sobic009G104100 Sobic002G101000--Sobic009G104100 Sobic007G220900 Sobic007G220900 Sobic002G101000--Sobic007G220900 Sobic002G101000--Sobic007G029400 Sobic009G179100 Sobic009G179100 Sobic002G101000--Sobic009G179100 Sobic005G050500 Sobic005G050500 Sobic002G101000--Sobic005G050500 Sobic009G101700 Sobic009G101700 Sobic002G101000--Sobic009G101700 Sobic002G054000 Sobic002G054000 Sobic002G101000--Sobic002G054000 Sobic004G342400 Sobic004G342400 Sobic002G101000--Sobic004G342400 Sobic004G349700 Sobic004G349700 Sobic002G101000--Sobic004G349700 Sobic009G109300 Sobic009G109300 Sobic007G112100--Sobic009G109300 Sobic001G532800 Sobic001G532800 Sobic007G112100--Sobic001G532800 Sobic004G032900 Sobic004G032900 Sobic007G112100--Sobic004G032900 Sobic002G158500 Sobic002G158500 Sobic007G112100--Sobic002G158500 Sobic002G236700 Sobic002G236700 Sobic007G112100--Sobic002G236700 Sobic006G120600 Sobic006G120600 Sobic007G112100--Sobic006G120600 Sobic001G140700 Sobic001G140700 Sobic007G112100--Sobic001G140700 Sobic002G304400 Sobic002G304400 Sobic007G112100--Sobic002G304400 Sobic007G112100--Sobic007G079600 Sobic003G179000--Sobic007G134800 Sobic003G179000--Sobic007G220900 Sobic003G179000--Sobic007G112100 Sobic003G179000--Sobic002G304400 Sobic003G179000--Sobic002G101000 Sobic001G460100 Sobic001G460100 Sobic003G179000--Sobic001G460100 Sobic009G052600 Sobic009G052600 Sobic003G179000--Sobic009G052600 Sobic006G157100 Sobic006G157100 Sobic003G179000--Sobic006G157100 Sobic003G179000--Sobic001G397000 Sobic007G029400--Sobic005G050500 Sobic001G039400 Sobic001G039400 Sobic007G029400--Sobic001G039400 Sobic007G029400--Sobic009G179100 Sobic003G109600 Sobic003G109600 Sobic007G029400--Sobic003G109600 Sobic002G304900 Sobic002G304900 Sobic007G029400--Sobic002G304900 Sobic009G233400 Sobic009G233400 Sobic007G029400--Sobic009G233400 Sobic009G223300 Sobic009G223300 Sobic007G029400--Sobic009G223300 Sobic010G069400 Sobic010G069400 Sobic007G029400--Sobic010G069400 Sobic007G029400--Sobic004G349700 Sobic001G154400 Sobic001G154400 Sobic001G336050--Sobic001G154400 Sobic001G517600 Sobic001G517600 Sobic001G336050--Sobic001G517600 Sobic006G108600 Sobic006G108600 Sobic001G336050--Sobic006G108600 Sobic004G032000 Sobic004G032000 Sobic001G336050--Sobic004G032000 Sobic003G289601 Sobic003G289601 Sobic001G336050--Sobic003G289601 Sobic001G336050--Sobic002G304400 Sobic001G336050--Sobic007G134800 Sobic003G072900 Sobic003G072900 Sobic001G336050--Sobic003G072900 Sobic001G336050--Sobic003G300900 Sobic004G355500 Sobic004G355500 Sobic007G079600--Sobic004G355500 Sobic010G103700 Sobic010G103700 Sobic007G079600--Sobic010G103700 Sobic009G088200 Sobic009G088200 Sobic007G079600--Sobic009G088200 Sobic007G079600--Sobic007G112100 Sobic006G051000 Sobic006G051000 Sobic007G079600--Sobic006G051000 Sobic003G179500 Sobic003G179500 Sobic007G079600--Sobic003G179500 Sobic001G103000 Sobic001G103000 Sobic007G079600--Sobic001G103000 Sobic003G183700 Sobic003G183700 Sobic007G079600--Sobic003G183700 Sobic007G139500 Sobic007G139500 Sobic007G079600--Sobic007G139500
Octagon: transcription factors


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