Gene annotation
Transcriptome id Sobic.010G144900.1
Synonym Sb10g018720
Functional annotation fiber protein Fb34, putative, expressed
UniProt C5Z336
Pfam PF06749
Panther DB PTHR31769:SF5 PTHR31769
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G13380 : Protein of unknown function (DUF1218)
RAP-DB (Rice) LOC_Os09g10910.1 : fiber protein Fb34, putative, expressed
MaizeGDB (Corn) Zm00025a042832
Brachypodium KQK18359
Barley -
Wheat TraesCS7A02G338100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G189200 secretory carrier-associated membrane protein, putative, expressed -
2 Sobic.006G104100 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed -
3 Sobic.001G397000 argininosuccinate lyase, putative, expressed K01755: argH, argininosuccinate lyase
4 Sobic.006G120700 N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase, putative, expressed K03434: N-acetylglucosaminylphosphatidylinositol deacetylase
5 Sobic.009G059500 solute carrier family 35 member E3, putative, expressed K15285: solute carrier family 35, member E3
6 Sobic.002G186900 enolase, putative, expressed K01689: ENO, enolase
7 Sobic.007G044400 MSP domain containing protein, expressed -
8 Sobic.002G236700 TMV-MP30 binding protein 2C, putative, expressed -
9 Sobic.001G371100 nucleolar protein 5A, putative, expressed K14564: nucleolar protein 56
10 Sobic.009G214100 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL
11 Sobic.007G113300 BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed -
12 Sobic.003G072900 OsRhmbd18 - Putative Rhomboid homologue, expressed -
13 Sobic.003G412800 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
14 Sobic.008G100700 SSXT protein, putative, expressed -
15 Sobic.009G224600 SNARE domain containing protein, putative, expressed K08506: syntaxin of plants SYP7
16 Sobic.003G396600 down-regulated TF in developmental senescence(PubMedID : 27586543)@ZOS5-12 - C2H2 zinc finger protein, expressed -
17 Sobic.003G290000 6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
18 Sobic.006G102900 expressed protein -
19 Sobic.010G217100 ubiquitin-conjugating enzyme, putative, expressed K10583: UBE2S, ubiquitin-conjugating enzyme E2 S
20 Sobic.008G141200 DUF1336 domain containing protein, expressed -


Gene co-expression network
sample Sobic010G144900 Sobic010G144900 Sobic009G189200 Sobic009G189200 Sobic010G144900--Sobic009G189200 Sobic006G104100 Sobic006G104100 Sobic010G144900--Sobic006G104100 Sobic001G397000 Sobic001G397000 Sobic010G144900--Sobic001G397000 Sobic006G120700 Sobic006G120700 Sobic010G144900--Sobic006G120700 Sobic009G059500 Sobic009G059500 Sobic010G144900--Sobic009G059500 Sobic002G186900 Sobic002G186900 Sobic010G144900--Sobic002G186900 Sobic007G044400 Sobic007G044400 Sobic010G144900--Sobic007G044400 Sobic002G236700 Sobic002G236700 Sobic010G144900--Sobic002G236700 Sobic001G371100 Sobic001G371100 Sobic010G144900--Sobic001G371100 Sobic006G102900 Sobic006G102900 Sobic009G189200--Sobic006G102900 Sobic001G261549 Sobic001G261549 Sobic009G189200--Sobic001G261549 Sobic002G057500 Sobic002G057500 Sobic009G189200--Sobic002G057500 Sobic009G189200--Sobic010G144900 Sobic009G189200--Sobic007G044400 Sobic004G285900 Sobic004G285900 Sobic009G189200--Sobic004G285900 Sobic003G084300 Sobic003G084300 Sobic009G189200--Sobic003G084300 Sobic003G122200 Sobic003G122200 Sobic009G189200--Sobic003G122200 Sobic001G131600 Sobic001G131600 Sobic009G189200--Sobic001G131600 Sobic006G104100--Sobic010G144900 Sobic007G191800 Sobic007G191800 Sobic006G104100--Sobic007G191800 Sobic005G110442 Sobic005G110442 Sobic006G104100--Sobic005G110442 Sobic010G217100 Sobic010G217100 Sobic006G104100--Sobic010G217100 Sobic001G116000 Sobic001G116000 Sobic006G104100--Sobic001G116000 Sobic006G038200 Sobic006G038200 Sobic006G104100--Sobic006G038200 Sobic006G104100--Sobic009G189200 Sobic001G196100 Sobic001G196100 Sobic006G104100--Sobic001G196100 Sobic006G191700 Sobic006G191700 Sobic006G104100--Sobic006G191700 Sobic001G397000--Sobic001G371100 Sobic003G300900 Sobic003G300900 Sobic001G397000--Sobic003G300900 Sobic003G396600 Sobic003G396600 Sobic001G397000--Sobic003G396600 Sobic007G134800 Sobic007G134800 Sobic001G397000--Sobic007G134800 Sobic001G397000--Sobic010G144900 Sobic008G100700 Sobic008G100700 Sobic001G397000--Sobic008G100700 Sobic001G081900 Sobic001G081900 Sobic001G397000--Sobic001G081900 Sobic002G101000 Sobic002G101000 Sobic001G397000--Sobic002G101000 Sobic001G228200 Sobic001G228200 Sobic001G397000--Sobic001G228200 Sobic006G200000 Sobic006G200000 Sobic006G120700--Sobic006G200000 Sobic001G068700 Sobic001G068700 Sobic006G120700--Sobic001G068700 Sobic006G120700--Sobic002G101000 Sobic006G120700--Sobic003G396600 Sobic006G120700--Sobic010G144900 Sobic010G265900 Sobic010G265900 Sobic006G120700--Sobic010G265900 Sobic006G120700--Sobic002G236700 Sobic006G120700--Sobic007G044400 Sobic006G120700--Sobic006G102900 Sobic008G168100 Sobic008G168100 Sobic009G059500--Sobic008G168100 Sobic002G271300 Sobic002G271300 Sobic009G059500--Sobic002G271300 Sobic009G059500--Sobic002G186900 Sobic008G126600 Sobic008G126600 Sobic009G059500--Sobic008G126600 Sobic003G294100 Sobic003G294100 Sobic009G059500--Sobic003G294100 Sobic008G141200 Sobic008G141200 Sobic009G059500--Sobic008G141200 Sobic009G059500--Sobic001G228200 Sobic004G054000 Sobic004G054000 Sobic009G059500--Sobic004G054000 Sobic009G059500--Sobic007G044400 Sobic002G186900--Sobic009G059500 Sobic002G186900--Sobic002G271300 Sobic003G096000 Sobic003G096000 Sobic002G186900--Sobic003G096000 Sobic010G089500 Sobic010G089500 Sobic002G186900--Sobic010G089500 Sobic010G101600 Sobic010G101600 Sobic002G186900--Sobic010G101600 Sobic004G056400 Sobic004G056400 Sobic002G186900--Sobic004G056400 Sobic002G186900--Sobic001G228200 Sobic002G186900--Sobic006G200000 Sobic002G186900--Sobic007G044400 Sobic007G044400--Sobic001G196100 Sobic007G044400--Sobic009G189200 Sobic007G044400--Sobic001G116000 Sobic001G026600 Sobic001G026600 Sobic007G044400--Sobic001G026600 Sobic002G313600 Sobic002G313600 Sobic007G044400--Sobic002G313600 Sobic007G044400--Sobic006G102900 Sobic007G044400--Sobic009G059500 Sobic007G044400--Sobic002G186900 Sobic007G183800 Sobic007G183800 Sobic007G044400--Sobic007G183800 Sobic002G246900 Sobic002G246900 Sobic002G236700--Sobic002G246900 Sobic001G140700 Sobic001G140700 Sobic002G236700--Sobic001G140700 Sobic001G532800 Sobic001G532800 Sobic002G236700--Sobic001G532800 Sobic003G107200 Sobic003G107200 Sobic002G236700--Sobic003G107200 Sobic009G109300 Sobic009G109300 Sobic002G236700--Sobic009G109300 Sobic007G112100 Sobic007G112100 Sobic002G236700--Sobic007G112100 Sobic002G315400 Sobic002G315400 Sobic002G236700--Sobic002G315400 Sobic007G218100 Sobic007G218100 Sobic002G236700--Sobic007G218100 Sobic010G191000 Sobic010G191000 Sobic002G236700--Sobic010G191000 Sobic010G032700 Sobic010G032700 Sobic001G371100--Sobic010G032700 Sobic001G371100--Sobic001G081900 Sobic001G371100--Sobic001G397000 Sobic001G530800 Sobic001G530800 Sobic001G371100--Sobic001G530800 Sobic006G251600 Sobic006G251600 Sobic001G371100--Sobic006G251600 Sobic004G047200 Sobic004G047200 Sobic001G371100--Sobic004G047200 Sobic008G083400 Sobic008G083400 Sobic001G371100--Sobic008G083400 Sobic004G082700 Sobic004G082700 Sobic001G371100--Sobic004G082700 Sobic001G371100--Sobic001G228200
Octagon: transcription factors


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