Gene annotation
Transcriptome id Sobic.003G290000.2,Sobic.003G290000.1
Synonym Sb03g034060, PFK3
Functional annotation 6-phosphofructokinase, putative, expressed
UniProt C5XJ72 , A0A1W0VZF2
Pfam PF00365
Panther DB PTHR13697 PTHR13697:SF34
NCBI CDD KOG2440; Pyrophosphate-dependent phosphofructo-1-kinase
KEGG Orthology K00850; pfkA, 6-phosphofructokinase 1
Gene Ontology GO:0006096; glycolytic process GO:00038726-phosphofructokinase activity


Orthologs (automatic annotation)
TAIR AT4G26270 : phosphofructokinase 3
RAP-DB (Rice) LOC_Os01g53680.1 : 6-phosphofructokinase, putative, expressed
MaizeGDB (Corn) Zm00025a044301 , Zm00025a037532 , Zm00025a027670
Brachypodium KQK05301 , KQK05302 , KQK09640 , KQK09639
Barley HORVU1Hr1G075550.8 , HORVU1Hr1G075550.1 , HORVU1Hr1G075550.3 , HORVU1Hr1G075550.2 , HORVU1Hr1G075550.5 , HORVU1Hr1G075550.4 , HORVU1Hr1G075550.7 , HORVU1Hr1G075550.6 , HORVU3Hr1G070300.20 , HORVU3Hr1G070300.21 , HORVU3Hr1G070300.22 , HORVU3Hr1G070300.19 , HORVU3Hr1G070300.18 , HORVU3Hr1G070300.11 , HORVU3Hr1G070300.10 , HORVU3Hr1G070300.13 , HORVU3Hr1G070300.12 , HORVU3Hr1G070300.15 , HORVU3Hr1G070300.17 , HORVU3Hr1G070300.14 , HORVU3Hr1G070300.16 , HORVU3Hr1G070300.9 , HORVU3Hr1G070300.8 , HORVU3Hr1G070300.5 , HORVU3Hr1G070300.4 , HORVU3Hr1G070300.7 , HORVU3Hr1G070300.6 , HORVU3Hr1G070300.1 , HORVU3Hr1G070300.3 , HORVU3Hr1G070300.2
Wheat TraesCS1D02G346200 , TraesCS1D02G346200 , TraesCS3B02G311900 , TraesCS3B02G311900 , TraesCS3A02G277700 , TraesCS3B02G311900 , TraesCS1A02G344000 , TraesCS3D02G278000 , TraesCS1B02G357000
Populus -


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cDNA sequences
Sobic.003G290000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G219800 transferase family protein, putative, expressed -
2 Sobic.007G186100 protein kinase, putative, expressed K13436: pto-interacting protein 1
3 Sobic.002G320800 expressed protein -
4 Sobic.003G443300 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
5 Sobic.006G216600 ribosomal protein L3, putative, expressed K02925: RP-L3e, large subunit ribosomal protein L3e
6 Sobic.006G156000 ferredoxin-thioredoxin reductase, variable chain, putative, expressed -
7 Sobic.010G144900 fiber protein Fb34, putative, expressed -
8 Sobic.009G212400 outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
9 Sobic.001G007600 GTPase-activating protein, putative, expressed K12493: ADP-ribosylation factor GTPase-activating protein 2/3
10 Sobic.003G011100 reticulon domain containing protein, putative, expressed -
11 Sobic.001G418000 NAD dependent epimerase/dehydratase family domain containing protein, expressed K12450: UDP-glucose 4,6-dehydratase
12 Sobic.008G132700 ATP-grasp domain containing protein, expressed K01648: ATP citrate (pro-S)-lyase
13 Sobic.001G418100 NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase
14 Sobic.002G309400 -(PubMedID : 26976818)@NAD-dependent malic enzyme, mitochondrial precursor, putative, expressed K00028: malate dehydrogenase (decarboxylating)
15 Sobic.003G410500 transaldolase, putative, expressed K00616: E2.2.1.2, talA, transaldolase
16 Sobic.009G181800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 9484480)@cytochrome P450, putative, expressed K09754: CYP98A, 5-O-(4-coumaroyl)-D-quinate 3'-monooxygenase
17 Sobic.001G112700 class I glutamine amidotransferase, putative, expressed K01658: anthranilate synthase component II
18 Sobic.008G130400 prefoldin, putative, expressed -
19 Sobic.005G017300 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
20 Sobic.001G494000 Expressed in older stem(PubMedID : 28649278)@homeodomain protein, putative, expressed -


Gene co-expression network
sample Sobic003G290000 Sobic003G290000 Sobic003G219800 Sobic003G219800 Sobic003G290000--Sobic003G219800 Sobic007G186100 Sobic007G186100 Sobic003G290000--Sobic007G186100 Sobic002G320800 Sobic002G320800 Sobic003G290000--Sobic002G320800 Sobic003G443300 Sobic003G443300 Sobic003G290000--Sobic003G443300 Sobic006G216600 Sobic006G216600 Sobic003G290000--Sobic006G216600 Sobic006G156000 Sobic006G156000 Sobic003G290000--Sobic006G156000 Sobic010G144900 Sobic010G144900 Sobic003G290000--Sobic010G144900 Sobic009G212400 Sobic009G212400 Sobic003G290000--Sobic009G212400 Sobic001G007600 Sobic001G007600 Sobic003G290000--Sobic001G007600 Sobic001G418100 Sobic001G418100 Sobic003G219800--Sobic001G418100 Sobic009G181800 Sobic009G181800 Sobic003G219800--Sobic009G181800 Sobic001G444800 Sobic001G444800 Sobic003G219800--Sobic001G444800 Sobic003G219800--Sobic006G156000 Sobic003G219800--Sobic003G443300 Sobic001G040100 Sobic001G040100 Sobic003G219800--Sobic001G040100 Sobic005G112800 Sobic005G112800 Sobic003G219800--Sobic005G112800 Sobic005G113300 Sobic005G113300 Sobic003G219800--Sobic005G113300 Sobic009G238900 Sobic009G238900 Sobic003G219800--Sobic009G238900 Sobic001G494000 Sobic001G494000 Sobic007G186100--Sobic001G494000 Sobic003G343900 Sobic003G343900 Sobic007G186100--Sobic003G343900 Sobic003G119500 Sobic003G119500 Sobic007G186100--Sobic003G119500 Sobic004G062500 Sobic004G062500 Sobic007G186100--Sobic004G062500 Sobic010G062100 Sobic010G062100 Sobic007G186100--Sobic010G062100 Sobic004G212300 Sobic004G212300 Sobic007G186100--Sobic004G212300 Sobic007G186100--Sobic003G219800 Sobic007G186100--Sobic009G181800 Sobic003G316000 Sobic003G316000 Sobic007G186100--Sobic003G316000 Sobic002G320800--Sobic003G219800 Sobic001G016500 Sobic001G016500 Sobic002G320800--Sobic001G016500 Sobic002G320800--Sobic006G156000 Sobic003G429000 Sobic003G429000 Sobic002G320800--Sobic003G429000 Sobic003G109600 Sobic003G109600 Sobic002G320800--Sobic003G109600 Sobic002G047600 Sobic002G047600 Sobic002G320800--Sobic002G047600 Sobic002G320800--Sobic006G216600 Sobic003G436700 Sobic003G436700 Sobic002G320800--Sobic003G436700 Sobic002G320800--Sobic004G062500 Sobic001G304400 Sobic001G304400 Sobic003G443300--Sobic001G304400 Sobic001G418900 Sobic001G418900 Sobic003G443300--Sobic001G418900 Sobic001G483100 Sobic001G483100 Sobic003G443300--Sobic001G483100 Sobic001G085400 Sobic001G085400 Sobic003G443300--Sobic001G085400 Sobic003G443300--Sobic006G216600 Sobic003G443300--Sobic006G156000 Sobic009G212200 Sobic009G212200 Sobic003G443300--Sobic009G212200 Sobic003G249700 Sobic003G249700 Sobic003G443300--Sobic003G249700 Sobic003G443300--Sobic003G219800 Sobic006G216600--Sobic001G085400 Sobic003G387900 Sobic003G387900 Sobic006G216600--Sobic003G387900 Sobic002G304900 Sobic002G304900 Sobic006G216600--Sobic002G304900 Sobic001G057300 Sobic001G057300 Sobic006G216600--Sobic001G057300 Sobic002G049300 Sobic002G049300 Sobic006G216600--Sobic002G049300 Sobic009G144300 Sobic009G144300 Sobic006G216600--Sobic009G144300 Sobic002G115000 Sobic002G115000 Sobic006G216600--Sobic002G115000 Sobic006G216600--Sobic002G047600 Sobic003G363800 Sobic003G363800 Sobic006G216600--Sobic003G363800 Sobic006G156000--Sobic003G443300 Sobic001G432000 Sobic001G432000 Sobic006G156000--Sobic001G432000 Sobic005G168100 Sobic005G168100 Sobic006G156000--Sobic005G168100 Sobic006G156000--Sobic003G219800 Sobic001G084100 Sobic001G084100 Sobic006G156000--Sobic001G084100 Sobic006G156000--Sobic001G304400 Sobic006G156000--Sobic009G212200 Sobic002G361700 Sobic002G361700 Sobic006G156000--Sobic002G361700 Sobic006G156000--Sobic001G040100 Sobic009G189200 Sobic009G189200 Sobic010G144900--Sobic009G189200 Sobic006G104100 Sobic006G104100 Sobic010G144900--Sobic006G104100 Sobic001G397000 Sobic001G397000 Sobic010G144900--Sobic001G397000 Sobic006G120700 Sobic006G120700 Sobic010G144900--Sobic006G120700 Sobic009G059500 Sobic009G059500 Sobic010G144900--Sobic009G059500 Sobic002G186900 Sobic002G186900 Sobic010G144900--Sobic002G186900 Sobic007G044400 Sobic007G044400 Sobic010G144900--Sobic007G044400 Sobic002G236700 Sobic002G236700 Sobic010G144900--Sobic002G236700 Sobic001G371100 Sobic001G371100 Sobic010G144900--Sobic001G371100 Sobic009G212400--Sobic003G387900 Sobic009G212400--Sobic006G216600 Sobic009G212400--Sobic002G304900 Sobic001G039400 Sobic001G039400 Sobic009G212400--Sobic001G039400 Sobic005G050500 Sobic005G050500 Sobic009G212400--Sobic005G050500 Sobic009G179100 Sobic009G179100 Sobic009G212400--Sobic009G179100 Sobic010G069400 Sobic010G069400 Sobic009G212400--Sobic010G069400 Sobic002G056200 Sobic002G056200 Sobic009G212400--Sobic002G056200 Sobic009G212400--Sobic001G483100 Sobic004G138800 Sobic004G138800 Sobic001G007600--Sobic004G138800 Sobic009G067000 Sobic009G067000 Sobic001G007600--Sobic009G067000 Sobic001G007600--Sobic001G418900 Sobic001G007600--Sobic003G443300 Sobic001G505500 Sobic001G505500 Sobic001G007600--Sobic001G505500 Sobic003G368500 Sobic003G368500 Sobic001G007600--Sobic003G368500 Sobic006G252200 Sobic006G252200 Sobic001G007600--Sobic006G252200 Sobic009G182300 Sobic009G182300 Sobic001G007600--Sobic009G182300 Sobic007G076300 Sobic007G076300 Sobic001G007600--Sobic007G076300
Octagon: transcription factors


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