Gene annotation
Transcriptome id Sobic.003G410500.3,Sobic.003G410500.2,Sobic.003G410500.1
Synonym Sb03g044500
Functional annotation transaldolase, putative, expressed
UniProt A0A1B6Q7Z8 , A0A1B6Q7Y0 , A0A1B6Q7X7
Pfam PF00923
Panther DB PTHR10683 PTHR10683:SF6
NCBI CDD KOG2772; Transaldolase
KEGG Orthology K00616; E2.2.1.2, talA, transaldolase
Gene Ontology GO:0005975; carbohydrate metabolic process


Orthologs (automatic annotation)
TAIR AT5G13420 : Aldolase-type TIM barrel family protein
RAP-DB (Rice) LOC_Os01g70170.1 : transaldolase, putative, expressed
MaizeGDB (Corn) Zm00025a039248 , Zm00025a026207
Brachypodium KQK11308 , KQK11306 , KQK11307
Barley -
Wheat TraesCS3D02G432600 , TraesCS3D02G432600
Populus -


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cDNA sequences
Sobic.003G410500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G040100 methylenetetrahydrofolate reductase, putative, expressed K00297: metF, methylenetetrahydrofolate reductase (NADPH)
2 Sobic.001G444800 ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
3 Sobic.004G138800 prefoldin subunit, putative, expressed K09548: prefoldin subunit 1
4 Sobic.003G219800 transferase family protein, putative, expressed -
5 Sobic.002G257300 ribulose-phosphate 3-epimerase, putative, expressed K01783: rpe, ribulose-phosphate 3-epimerase
6 Sobic.001G304400 expressed protein -
7 Sobic.003G363800 L1P family of ribosomal proteins domain containing protein, expressed K02865: RP-L10Ae, large subunit ribosomal protein L10Ae
8 Sobic.009G212400 outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
9 Sobic.009G238900 dehydrogenase, putative, expressed K00031: IDH1, IDH2, isocitrate dehydrogenase
10 Sobic.007G076300 26S proteasome non-ATPase regulatory subunit 8, putative, expressed K03031: PSMD8, 26S proteasome regulatory subunit N12
11 Sobic.003G387900 ribosomal L18p/L5e family protein, putative, expressed K02932: RP-L5e, large subunit ribosomal protein L5e
12 Sobic.006G216600 ribosomal protein L3, putative, expressed K02925: RP-L3e, large subunit ribosomal protein L3e
13 Sobic.004G216800 h/ACA ribonucleoprotein complex subunit 3, putative, expressed K11130: NOP10, H/ACA ribonucleoprotein complex subunit 3
14 Sobic.001G418900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.006G156000 ferredoxin-thioredoxin reductase, variable chain, putative, expressed -
16 Sobic.010G239500 ubiquitin family protein, putative, expressed K08770: ubiquitin C
17 Sobic.006G213000 ribosomal protein S17, putative, expressed K02949: RP-S11e, small subunit ribosomal protein S11e
18 Sobic.001G085400 ribosomal protein L13, putative, expressed K02872: RP-L13Ae, large subunit ribosomal protein L13Ae
19 Sobic.004G349700 rRNA 2-O-methyltransferase fibrillarin 2, putative, expressed K14563: NOP1, rRNA 2'-O-methyltransferase fibrillarin
20 Sobic.008G132400 expressed protein -


Gene co-expression network
sample Sobic003G410500 Sobic003G410500 Sobic001G040100 Sobic001G040100 Sobic003G410500--Sobic001G040100 Sobic001G444800 Sobic001G444800 Sobic003G410500--Sobic001G444800 Sobic004G138800 Sobic004G138800 Sobic003G410500--Sobic004G138800 Sobic003G219800 Sobic003G219800 Sobic003G410500--Sobic003G219800 Sobic002G257300 Sobic002G257300 Sobic003G410500--Sobic002G257300 Sobic001G304400 Sobic001G304400 Sobic003G410500--Sobic001G304400 Sobic003G363800 Sobic003G363800 Sobic003G410500--Sobic003G363800 Sobic009G212400 Sobic009G212400 Sobic003G410500--Sobic009G212400 Sobic009G238900 Sobic009G238900 Sobic003G410500--Sobic009G238900 Sobic005G112800 Sobic005G112800 Sobic001G040100--Sobic005G112800 Sobic001G040100--Sobic003G219800 Sobic002G356400 Sobic002G356400 Sobic001G040100--Sobic002G356400 Sobic003G209000 Sobic003G209000 Sobic001G040100--Sobic003G209000 Sobic003G151600 Sobic003G151600 Sobic001G040100--Sobic003G151600 Sobic001G040100--Sobic003G410500 Sobic006G156000 Sobic006G156000 Sobic001G040100--Sobic006G156000 Sobic002G418400 Sobic002G418400 Sobic001G040100--Sobic002G418400 Sobic001G040100--Sobic002G257300 Sobic001G444800--Sobic003G363800 Sobic001G085400 Sobic001G085400 Sobic001G444800--Sobic001G085400 Sobic009G076400 Sobic009G076400 Sobic001G444800--Sobic009G076400 Sobic003G249700 Sobic003G249700 Sobic001G444800--Sobic003G249700 Sobic003G387900 Sobic003G387900 Sobic001G444800--Sobic003G387900 Sobic007G019400 Sobic007G019400 Sobic001G444800--Sobic007G019400 Sobic002G255300 Sobic002G255300 Sobic001G444800--Sobic002G255300 Sobic007G178600 Sobic007G178600 Sobic001G444800--Sobic007G178600 Sobic009G227400 Sobic009G227400 Sobic001G444800--Sobic009G227400 Sobic001G418900 Sobic001G418900 Sobic004G138800--Sobic001G418900 Sobic004G224900 Sobic004G224900 Sobic004G138800--Sobic004G224900 Sobic007G076300 Sobic007G076300 Sobic004G138800--Sobic007G076300 Sobic001G505500 Sobic001G505500 Sobic004G138800--Sobic001G505500 Sobic009G119900 Sobic009G119900 Sobic004G138800--Sobic009G119900 Sobic001G096100 Sobic001G096100 Sobic004G138800--Sobic001G096100 Sobic003G330500 Sobic003G330500 Sobic004G138800--Sobic003G330500 Sobic001G007600 Sobic001G007600 Sobic004G138800--Sobic001G007600 Sobic006G252200 Sobic006G252200 Sobic004G138800--Sobic006G252200 Sobic001G418100 Sobic001G418100 Sobic003G219800--Sobic001G418100 Sobic009G181800 Sobic009G181800 Sobic003G219800--Sobic009G181800 Sobic003G219800--Sobic001G444800 Sobic003G219800--Sobic006G156000 Sobic003G443300 Sobic003G443300 Sobic003G219800--Sobic003G443300 Sobic003G219800--Sobic001G040100 Sobic003G219800--Sobic005G112800 Sobic005G113300 Sobic005G113300 Sobic003G219800--Sobic005G113300 Sobic003G219800--Sobic009G238900 Sobic002G398901 Sobic002G398901 Sobic002G257300--Sobic002G398901 Sobic002G257300--Sobic001G418900 Sobic002G190900 Sobic002G190900 Sobic002G257300--Sobic002G190900 Sobic002G257300--Sobic003G209000 Sobic004G051700 Sobic004G051700 Sobic002G257300--Sobic004G051700 Sobic010G239500 Sobic010G239500 Sobic002G257300--Sobic010G239500 Sobic002G257300--Sobic002G418400 Sobic002G257300--Sobic009G119900 Sobic002G257300--Sobic003G363800 Sobic001G304400--Sobic003G443300 Sobic001G432000 Sobic001G432000 Sobic001G304400--Sobic001G432000 Sobic001G286200 Sobic001G286200 Sobic001G304400--Sobic001G286200 Sobic001G304400--Sobic003G249700 Sobic009G212200 Sobic009G212200 Sobic001G304400--Sobic009G212200 Sobic001G304400--Sobic007G019400 Sobic002G304900 Sobic002G304900 Sobic001G304400--Sobic002G304900 Sobic003G150000 Sobic003G150000 Sobic001G304400--Sobic003G150000 Sobic009G062000 Sobic009G062000 Sobic001G304400--Sobic009G062000 Sobic003G346600 Sobic003G346600 Sobic003G363800--Sobic003G346600 Sobic006G137100 Sobic006G137100 Sobic003G363800--Sobic006G137100 Sobic003G363800--Sobic007G178600 Sobic002G047600 Sobic002G047600 Sobic003G363800--Sobic002G047600 Sobic003G363800--Sobic003G387900 Sobic003G363800--Sobic009G076400 Sobic003G363800--Sobic001G085400 Sobic004G331400 Sobic004G331400 Sobic003G363800--Sobic004G331400 Sobic006G216600 Sobic006G216600 Sobic003G363800--Sobic006G216600 Sobic009G212400--Sobic003G387900 Sobic009G212400--Sobic006G216600 Sobic009G212400--Sobic002G304900 Sobic001G039400 Sobic001G039400 Sobic009G212400--Sobic001G039400 Sobic005G050500 Sobic005G050500 Sobic009G212400--Sobic005G050500 Sobic009G179100 Sobic009G179100 Sobic009G212400--Sobic009G179100 Sobic010G069400 Sobic010G069400 Sobic009G212400--Sobic010G069400 Sobic002G056200 Sobic002G056200 Sobic009G212400--Sobic002G056200 Sobic001G483100 Sobic001G483100 Sobic009G212400--Sobic001G483100 Sobic009G238900--Sobic003G219800 Sobic009G238900--Sobic001G444800 Sobic009G238900--Sobic005G112800 Sobic006G035900 Sobic006G035900 Sobic009G238900--Sobic006G035900 Sobic009G238900--Sobic001G040100 Sobic009G238900--Sobic001G418100 Sobic002G361700 Sobic002G361700 Sobic009G238900--Sobic002G361700 Sobic009G238900--Sobic003G443300 Sobic001G514200 Sobic001G514200 Sobic009G238900--Sobic001G514200
Octagon: transcription factors


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