Gene annotation
Transcriptome id Sobic.009G212400.1
Synonym ATVDAC3, VDAC3, Sb09g026790
Functional annotation outer mitochondrial membrane porin, putative, expressed
UniProt C5YUI7
Pfam PF01459
Panther DB PTHR11743 PTHR11743:SF34
NCBI CDD KOG3126; Porin/voltage-dependent anion-selective channel protein
KEGG Orthology K15040; voltage-dependent anion channel protein 2
Gene Ontology GO:0005741; mitochondrial outer membrane


Orthologs (automatic annotation)
TAIR AT5G15090 : voltage dependent anion channel 3
RAP-DB (Rice) LOC_Os05g45950.1 : outer mitochondrial membrane porin, putative, expressed
MaizeGDB (Corn) Zm00025a044369 , Zm00025a038319
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G212400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G387900 ribosomal L18p/L5e family protein, putative, expressed K02932: RP-L5e, large subunit ribosomal protein L5e
2 Sobic.006G216600 ribosomal protein L3, putative, expressed K02925: RP-L3e, large subunit ribosomal protein L3e
3 Sobic.002G304900 60S ribosomal protein L15, putative, expressed K02877: RP-L15e, large subunit ribosomal protein L15e
4 Sobic.001G039400 40S ribosomal protein S26, putative, expressed K02976: RP-S26e, small subunit ribosomal protein S26e
5 Sobic.005G050500 ribosomal protein L3, putative, expressed K02925: RP-L3e, large subunit ribosomal protein L3e
6 Sobic.009G179100 ribosomal protein L7Ae, putative, expressed K02908: RP-L30e, large subunit ribosomal protein L30e
7 Sobic.010G069400 60S ribosomal protein L19-3, putative, expressed K02885: RP-L19e, large subunit ribosomal protein L19e
8 Sobic.002G056200 40S ribosomal protein S15, putative, expressed K02958: RP-S15e, small subunit ribosomal protein S15e
9 Sobic.001G483100 peptidase, T1 family, putative, expressed K02730: 20S proteasome subunit alpha 1
10 Sobic.007G029400 60S acidic ribosomal protein P0, putative, expressed K02941: RP-LP0, large subunit ribosomal protein LP0
11 Sobic.002G406500 elongation factor protein, putative, expressed K03232: elongation factor 1-beta
12 Sobic.004G349700 rRNA 2-O-methyltransferase fibrillarin 2, putative, expressed K14563: NOP1, rRNA 2'-O-methyltransferase fibrillarin
13 Sobic.003G109600 40S ribosomal protein S5, putative, expressed K02989: RP-S5e, small subunit ribosomal protein S5e
14 Sobic.001G537200 transcription factor BTF3, putative, expressed K01527: EGD1, nascent polypeptide-associated complex subunit beta
15 Sobic.001G085400 ribosomal protein L13, putative, expressed K02872: RP-L13Ae, large subunit ribosomal protein L13Ae
16 Sobic.003G443300 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
17 Sobic.009G144300 ribosomal protein L7Ae, putative, expressed K02951: RP-S12e, small subunit ribosomal protein S12e
18 Sobic.003G249700 60S ribosomal protein L18a, putative, expressed K02882: RP-L18Ae, large subunit ribosomal protein L18Ae
19 Sobic.002G379500 40S ribosomal protein S6, putative, expressed K02991: RP-S6e, small subunit ribosomal protein S6e
20 Sobic.001G436200 S10/S20 domain containing ribosomal protein, putative, expressed K02969: RP-S20e, small subunit ribosomal protein S20e


Gene co-expression network
sample Sobic009G212400 Sobic009G212400 Sobic003G387900 Sobic003G387900 Sobic009G212400--Sobic003G387900 Sobic006G216600 Sobic006G216600 Sobic009G212400--Sobic006G216600 Sobic002G304900 Sobic002G304900 Sobic009G212400--Sobic002G304900 Sobic001G039400 Sobic001G039400 Sobic009G212400--Sobic001G039400 Sobic005G050500 Sobic005G050500 Sobic009G212400--Sobic005G050500 Sobic009G179100 Sobic009G179100 Sobic009G212400--Sobic009G179100 Sobic010G069400 Sobic010G069400 Sobic009G212400--Sobic010G069400 Sobic002G056200 Sobic002G056200 Sobic009G212400--Sobic002G056200 Sobic001G483100 Sobic001G483100 Sobic009G212400--Sobic001G483100 Sobic006G137100 Sobic006G137100 Sobic003G387900--Sobic006G137100 Sobic006G213000 Sobic006G213000 Sobic003G387900--Sobic006G213000 Sobic002G379500 Sobic002G379500 Sobic003G387900--Sobic002G379500 Sobic007G019400 Sobic007G019400 Sobic003G387900--Sobic007G019400 Sobic009G076400 Sobic009G076400 Sobic003G387900--Sobic009G076400 Sobic003G249700 Sobic003G249700 Sobic003G387900--Sobic003G249700 Sobic002G047600 Sobic002G047600 Sobic003G387900--Sobic002G047600 Sobic003G387900--Sobic010G069400 Sobic003G387900--Sobic002G056200 Sobic001G085400 Sobic001G085400 Sobic006G216600--Sobic001G085400 Sobic006G216600--Sobic003G387900 Sobic006G216600--Sobic002G304900 Sobic001G057300 Sobic001G057300 Sobic006G216600--Sobic001G057300 Sobic002G049300 Sobic002G049300 Sobic006G216600--Sobic002G049300 Sobic009G144300 Sobic009G144300 Sobic006G216600--Sobic009G144300 Sobic002G115000 Sobic002G115000 Sobic006G216600--Sobic002G115000 Sobic006G216600--Sobic002G047600 Sobic003G363800 Sobic003G363800 Sobic006G216600--Sobic003G363800 Sobic002G304900--Sobic001G085400 Sobic009G233400 Sobic009G233400 Sobic002G304900--Sobic009G233400 Sobic001G058900 Sobic001G058900 Sobic002G304900--Sobic001G058900 Sobic001G334300 Sobic001G334300 Sobic002G304900--Sobic001G334300 Sobic002G304900--Sobic009G179100 Sobic002G304900--Sobic005G050500 Sobic002G304900--Sobic003G387900 Sobic002G304900--Sobic010G069400 Sobic002G304900--Sobic001G039400 Sobic001G039400--Sobic003G249700 Sobic003G109600 Sobic003G109600 Sobic001G039400--Sobic003G109600 Sobic001G039400--Sobic010G069400 Sobic001G039400--Sobic002G304900 Sobic001G039400--Sobic009G233400 Sobic009G173500 Sobic009G173500 Sobic001G039400--Sobic009G173500 Sobic001G039400--Sobic007G019400 Sobic001G039400--Sobic002G047600 Sobic001G039400--Sobic005G050500 Sobic005G050500--Sobic002G304900 Sobic005G050500--Sobic010G069400 Sobic005G050500--Sobic009G233400 Sobic005G050500--Sobic002G056200 Sobic005G050500--Sobic001G039400 Sobic005G050500--Sobic003G387900 Sobic005G050500--Sobic001G334300 Sobic005G050500--Sobic009G179100 Sobic007G029400 Sobic007G029400 Sobic005G050500--Sobic007G029400 Sobic009G179100--Sobic002G304900 Sobic009G101700 Sobic009G101700 Sobic009G179100--Sobic009G101700 Sobic004G342400 Sobic004G342400 Sobic009G179100--Sobic004G342400 Sobic009G179100--Sobic001G334300 Sobic009G179100--Sobic005G050500 Sobic009G179100--Sobic009G233400 Sobic009G179100--Sobic003G387900 Sobic009G179100--Sobic001G039400 Sobic009G179100--Sobic009G173500 Sobic010G069400--Sobic003G387900 Sobic010G069400--Sobic009G233400 Sobic010G069400--Sobic001G039400 Sobic010G069400--Sobic005G050500 Sobic010G069400--Sobic002G304900 Sobic010G069400--Sobic002G047600 Sobic004G349700 Sobic004G349700 Sobic010G069400--Sobic004G349700 Sobic010G069400--Sobic002G056200 Sobic010G069400--Sobic001G085400 Sobic002G056200--Sobic002G379500 Sobic002G056200--Sobic006G137100 Sobic001G403500 Sobic001G403500 Sobic002G056200--Sobic001G403500 Sobic002G056200--Sobic006G213000 Sobic002G056200--Sobic007G019400 Sobic002G056200--Sobic003G387900 Sobic002G056200--Sobic003G109600 Sobic001G436200 Sobic001G436200 Sobic002G056200--Sobic001G436200 Sobic002G056200--Sobic002G047600 Sobic010G204500 Sobic010G204500 Sobic001G483100--Sobic010G204500 Sobic009G180000 Sobic009G180000 Sobic001G483100--Sobic009G180000 Sobic001G014500 Sobic001G014500 Sobic001G483100--Sobic001G014500 Sobic001G483100--Sobic002G056200 Sobic001G483100--Sobic003G249700 Sobic005G229300 Sobic005G229300 Sobic001G483100--Sobic005G229300 Sobic001G483100--Sobic002G379500 Sobic001G537200 Sobic001G537200 Sobic001G483100--Sobic001G537200 Sobic001G483100--Sobic003G109600
Octagon: transcription factors


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