Gene annotation
Transcriptome id Sobic.001G112700.1
Synonym Sb01g010040
Functional annotation class I glutamine amidotransferase, putative, expressed
UniProt C5WN01
Pfam PF07722
Panther DB PTHR11922 PTHR11922:SF37
NCBI CDD KOG0026; Anthranilate synthase, beta chain
KEGG Orthology K01658; anthranilate synthase component II
Gene Ontology GO:0016787; hydrolase activity GO:0006541glutamine metabolic process


Orthologs (automatic annotation)
TAIR AT1G25220 : anthranilate synthase beta subunit 1
RAP-DB (Rice) LOC_Os03g50880.1 : class I glutamine amidotransferase, putative, expressed
MaizeGDB (Corn) Zm00025a007892
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G392800 thymidylate kinase, putative, expressed K00943: tmk, dTMP kinase
2 Sobic.001G242800 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
3 Sobic.002G353000 5-formyltetrahydrofolate cyclo-ligase, putative, expressed K01934: 5-formyltetrahydrofolate cyclo-ligase
4 Sobic.006G002700 OsRhmbd10 - Putative Rhomboid homologue, expressed -
5 Sobic.001G096100 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
6 Sobic.002G309400 -(PubMedID : 26976818)@NAD-dependent malic enzyme, mitochondrial precursor, putative, expressed K00028: malate dehydrogenase (decarboxylating)
7 Sobic.003G290000 6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
8 Sobic.009G126500 methyltransferase, putative, expressed -
9 Sobic.010G060600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
10 Sobic.007G092100 ADP-ribosylation factor, putative, expressed K07942: ADP-ribosylation factor-like protein 1
11 Sobic.001G281900 miro, putative, expressed K07977: Arf/Sar family, other
12 Sobic.001G512000 cyclin-dependent kinase inhibitor, putative, expressed -
13 Sobic.001G007600 GTPase-activating protein, putative, expressed K12493: ADP-ribosylation factor GTPase-activating protein 2/3
14 Sobic.009G238900 dehydrogenase, putative, expressed K00031: IDH1, IDH2, isocitrate dehydrogenase
15 Sobic.008G132700 ATP-grasp domain containing protein, expressed K01648: ATP citrate (pro-S)-lyase
16 Sobic.003G160900 40S ribosomal protein S4, putative, expressed K02987: RP-S4e, small subunit ribosomal protein S4e
17 Sobic.003G443300 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
18 Sobic.001G432300 imidazole glycerol phosphate synthase hisHF, chloroplast precursor, putative, expressed K01663: imidazole glycerol-phosphate synthase
19 Sobic.010G218300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA binding protein, putative, expressed -
20 Sobic.004G138800 prefoldin subunit, putative, expressed K09548: prefoldin subunit 1


Gene co-expression network
sample Sobic001G112700 Sobic001G112700 Sobic002G392800 Sobic002G392800 Sobic001G112700--Sobic002G392800 Sobic001G242800 Sobic001G242800 Sobic001G112700--Sobic001G242800 Sobic002G353000 Sobic002G353000 Sobic001G112700--Sobic002G353000 Sobic006G002700 Sobic006G002700 Sobic001G112700--Sobic006G002700 Sobic001G096100 Sobic001G096100 Sobic001G112700--Sobic001G096100 Sobic002G309400 Sobic002G309400 Sobic001G112700--Sobic002G309400 Sobic003G290000 Sobic003G290000 Sobic001G112700--Sobic003G290000 Sobic009G126500 Sobic009G126500 Sobic001G112700--Sobic009G126500 Sobic010G060600 Sobic010G060600 Sobic001G112700--Sobic010G060600 Sobic002G392800--Sobic001G242800 Sobic002G392800--Sobic001G112700 Sobic008G004100 Sobic008G004100 Sobic002G392800--Sobic008G004100 Sobic003G160900 Sobic003G160900 Sobic002G392800--Sobic003G160900 Sobic010G080500 Sobic010G080500 Sobic002G392800--Sobic010G080500 Sobic002G392800--Sobic006G002700 Sobic009G238900 Sobic009G238900 Sobic002G392800--Sobic009G238900 Sobic009G117000 Sobic009G117000 Sobic002G392800--Sobic009G117000 Sobic008G132700 Sobic008G132700 Sobic002G392800--Sobic008G132700 Sobic001G242800--Sobic002G392800 Sobic002G319200 Sobic002G319200 Sobic001G242800--Sobic002G319200 Sobic004G152200 Sobic004G152200 Sobic001G242800--Sobic004G152200 Sobic001G242800--Sobic008G004100 Sobic001G242800--Sobic001G112700 Sobic001G242800--Sobic009G126500 Sobic001G432300 Sobic001G432300 Sobic001G242800--Sobic001G432300 Sobic009G151700 Sobic009G151700 Sobic001G242800--Sobic009G151700 Sobic006G177300 Sobic006G177300 Sobic001G242800--Sobic006G177300 Sobic002G301400 Sobic002G301400 Sobic002G353000--Sobic002G301400 Sobic001G481700 Sobic001G481700 Sobic002G353000--Sobic001G481700 Sobic007G220900 Sobic007G220900 Sobic002G353000--Sobic007G220900 Sobic004G138800 Sobic004G138800 Sobic002G353000--Sobic004G138800 Sobic004G224900 Sobic004G224900 Sobic002G353000--Sobic004G224900 Sobic008G132400 Sobic008G132400 Sobic002G353000--Sobic008G132400 Sobic002G406500 Sobic002G406500 Sobic002G353000--Sobic002G406500 Sobic002G353000--Sobic008G132700 Sobic010G042800 Sobic010G042800 Sobic002G353000--Sobic010G042800 Sobic003G330500 Sobic003G330500 Sobic006G002700--Sobic003G330500 Sobic001G007600 Sobic001G007600 Sobic006G002700--Sobic001G007600 Sobic001G110400 Sobic001G110400 Sobic006G002700--Sobic001G110400 Sobic006G002700--Sobic004G224900 Sobic006G002700--Sobic009G238900 Sobic006G002700--Sobic001G096100 Sobic001G502200 Sobic001G502200 Sobic006G002700--Sobic001G502200 Sobic009G088100 Sobic009G088100 Sobic006G002700--Sobic009G088100 Sobic006G002700--Sobic002G392800 Sobic004G066800 Sobic004G066800 Sobic001G096100--Sobic004G066800 Sobic001G096100--Sobic004G138800 Sobic001G096100--Sobic003G330500 Sobic006G252200 Sobic006G252200 Sobic001G096100--Sobic006G252200 Sobic001G096100--Sobic004G224900 Sobic002G255100 Sobic002G255100 Sobic001G096100--Sobic002G255100 Sobic001G096100--Sobic001G481700 Sobic003G196800 Sobic003G196800 Sobic001G096100--Sobic003G196800 Sobic010G038700 Sobic010G038700 Sobic001G096100--Sobic010G038700 Sobic001G529000 Sobic001G529000 Sobic002G309400--Sobic001G529000 Sobic001G331900 Sobic001G331900 Sobic002G309400--Sobic001G331900 Sobic005G092800 Sobic005G092800 Sobic002G309400--Sobic005G092800 Sobic008G130400 Sobic008G130400 Sobic002G309400--Sobic008G130400 Sobic003G124800 Sobic003G124800 Sobic002G309400--Sobic003G124800 Sobic006G150600 Sobic006G150600 Sobic002G309400--Sobic006G150600 Sobic003G362400 Sobic003G362400 Sobic002G309400--Sobic003G362400 Sobic007G115100 Sobic007G115100 Sobic002G309400--Sobic007G115100 Sobic004G107600 Sobic004G107600 Sobic002G309400--Sobic004G107600 Sobic003G219800 Sobic003G219800 Sobic003G290000--Sobic003G219800 Sobic007G186100 Sobic007G186100 Sobic003G290000--Sobic007G186100 Sobic002G320800 Sobic002G320800 Sobic003G290000--Sobic002G320800 Sobic003G443300 Sobic003G443300 Sobic003G290000--Sobic003G443300 Sobic006G216600 Sobic006G216600 Sobic003G290000--Sobic006G216600 Sobic006G156000 Sobic006G156000 Sobic003G290000--Sobic006G156000 Sobic010G144900 Sobic010G144900 Sobic003G290000--Sobic010G144900 Sobic009G212400 Sobic009G212400 Sobic003G290000--Sobic009G212400 Sobic003G290000--Sobic001G007600 Sobic009G126500--Sobic001G242800 Sobic009G126500--Sobic002G319200 Sobic009G126500--Sobic002G309400 Sobic009G126500--Sobic009G238900 Sobic009G126500--Sobic001G112700 Sobic009G126500--Sobic002G392800 Sobic010G218300 Sobic010G218300 Sobic009G126500--Sobic010G218300 Sobic005G211200 Sobic005G211200 Sobic009G126500--Sobic005G211200 Sobic007G183800 Sobic007G183800 Sobic009G126500--Sobic007G183800 Sobic009G059500 Sobic009G059500 Sobic010G060600--Sobic009G059500 Sobic005G164700 Sobic005G164700 Sobic010G060600--Sobic005G164700 Sobic010G060600--Sobic001G112700 Sobic002G280700 Sobic002G280700 Sobic010G060600--Sobic002G280700 Sobic010G060600--Sobic008G004100 Sobic002G332100 Sobic002G332100 Sobic010G060600--Sobic002G332100 Sobic003G198500 Sobic003G198500 Sobic010G060600--Sobic003G198500 Sobic002G252000 Sobic002G252000 Sobic010G060600--Sobic002G252000 Sobic003G294100 Sobic003G294100 Sobic010G060600--Sobic003G294100
Octagon: transcription factors


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