Gene annotation
Transcriptome id Sobic.010G060600.1,Sobic.010G060600.2
Synonym Sb10g005250, 1, ATAVP3, AtVHP1, AVP-3, AVP1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
inorganic H+ pyrophosphatase, putative, expressed
UniProt A0A194YHK2 , A0A194YIM2 , D9IG65 , Q8LJY9
Pfam PF03030
Panther DB PTHR31998 PTHR31998:SF13 PTHR31998:SF13 PTHR31998
NCBI CDD -
KEGG Orthology K01507; inorganic pyrophosphatase
Gene Ontology GO:0004427; inorganic diphosphatase activity GO:0009678pyrophosphate hydrolysis-driven proton transmembrane transporter activity GO:0016020membrane GO:0016020membrane GO:0009678pyrophosphate hydrolysis-driven proton transmembrane transporter activity GO:0004427inorganic diphosphatase activity


Orthologs (automatic annotation)
TAIR AT1G15690 : Inorganic H pyrophosphatase family protein
RAP-DB (Rice) LOC_Os06g08080.1 : inorganic H+ pyrophosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a051395 , Zm00025a046084 , Zm00025a046083 , Zm00025a011626 , Zm00025a006108 , Zm00025a011415 , Zm00025a049815 , Zm00025a042870 , Zm00025a034722 , Zm00025a019304
Brachypodium KQK19346 , KQK16780 , KQK04235
Barley HORVU1Hr1G023100.1 , HORVU1Hr1G023100.2 , HORVU0Hr1G028950.8 , HORVU0Hr1G028950.6 , HORVU0Hr1G028950.4 , HORVU0Hr1G028950.5 , HORVU0Hr1G028950.2 , HORVU0Hr1G028950.3 , HORVU0Hr1G028950.1 , HORVU1Hr1G061140.9 , HORVU1Hr1G061140.8 , HORVU1Hr1G061140.3 , HORVU1Hr1G061140.2 , HORVU1Hr1G061140.1 , HORVU1Hr1G061140.7 , HORVU1Hr1G061140.6 , HORVU1Hr1G061140.5 , HORVU1Hr1G061140.4 , HORVU0Hr1G028950.10 , HORVU0Hr1G028950.11 , HORVU0Hr1G028950.9 , HORVU0Hr1G032540.1 , HORVU0Hr1G032070.3 , HORVU7Hr1G031480.1 , HORVU0Hr1G032540.2 , HORVU7Hr1G031470.2 , HORVU7Hr1G031470.3 , HORVU0Hr1G032070.2 , HORVU0Hr1G032070.1 , HORVU7Hr1G114250.2 , HORVU7Hr1G114250.3 , HORVU7Hr1G114250.1 , HORVU7Hr1G114250.7 , HORVU7Hr1G114250.4 , HORVU7Hr1G114250.5 , HORVU0Hr1G032070.4 , HORVU5Hr1G076290.3 , HORVU5Hr1G076290.2 , HORVU5Hr1G076290.1 , HORVU0Hr1G028950.7 , HORVU1Hr1G061140.12 , HORVU1Hr1G061140.11 , HORVU1Hr1G061140.10 , HORVU4Hr1G033720.1 , HORVU4Hr1G033720.3 , HORVU4Hr1G033720.2 , HORVU4Hr1G033720.5 , HORVU4Hr1G033720.4
Wheat TraesCS1B02G124600 , TraesCS7A02G141300 , TraesCS7D02G142600 , TraesCS7A02G141300 , TraesCS7D02G142600 , TraesCS7B02G433800 , TraesCS1D02G253200 , TraesCS7A02G141300 , TraesCS1A02G253600 , TraesCS1A02G107200 , TraesCS1A02G107200 , TraesCS7D02G142600 , TraesCS7B02G042600 , TraesCS7B02G042600 , TraesCS7D02G507600
Populus PNS94048 , PNS94009


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cDNA sequences
Sobic.010G060600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G059500 solute carrier family 35 member E3, putative, expressed K15285: solute carrier family 35, member E3
2 Sobic.005G164700 h/ACA ribonucleoprotein complex subunit 1-like protein 1, putative, expressed K11128: GAR1, H/ACA ribonucleoprotein complex subunit 1
3 Sobic.001G112700 class I glutamine amidotransferase, putative, expressed K01658: anthranilate synthase component II
4 Sobic.002G280700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WD domain, G-beta repeat domain containing protein, expressed K10752: RBBP4, HAT2, CAF1, histone-binding protein RBBP4
5 Sobic.008G004100 phosphatidate cytidylyltransferase, putative, expressed K15892: farnesol kinase
6 Sobic.002G332100 expressed protein -
7 Sobic.003G198500 XIK, putative, expressed K10357: myosin V
8 Sobic.002G252000 CHIT13 - Chitinase family protein precursor, expressed -
9 Sobic.003G294100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dihydropyrimidinase, putative, expressed K01465: URA4, dihydroorotase
10 Sobic.010G114000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
11 Sobic.010G144900 fiber protein Fb34, putative, expressed -
12 Sobic.006G035900 ribosomal protein, putative, expressed K02995: RP-S8e, small subunit ribosomal protein S8e
13 Sobic.003G181600 early-responsive to dehydration protein-related, putative, expressed -
14 Sobic.009G213600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@green ripe-like, putative, expressed -
15 Sobic.002G271300 NC domain-containing protein, putative, expressed -
16 Sobic.006G156000 ferredoxin-thioredoxin reductase, variable chain, putative, expressed -
17 Sobic.004G319600 polygalacturonase, putative, expressed -
18 Sobic.009G026200 IQ calmodulin-binding motif domain containing protein, expressed -
19 Sobic.008G174800 DNA binding protein, putative, expressed -
20 Sobic.006G038200 receptor protein kinase, putative, expressed -


Gene co-expression network
sample Sobic010G060600 Sobic010G060600 Sobic009G059500 Sobic009G059500 Sobic010G060600--Sobic009G059500 Sobic005G164700 Sobic005G164700 Sobic010G060600--Sobic005G164700 Sobic001G112700 Sobic001G112700 Sobic010G060600--Sobic001G112700 Sobic002G280700 Sobic002G280700 Sobic010G060600--Sobic002G280700 Sobic008G004100 Sobic008G004100 Sobic010G060600--Sobic008G004100 Sobic002G332100 Sobic002G332100 Sobic010G060600--Sobic002G332100 Sobic003G198500 Sobic003G198500 Sobic010G060600--Sobic003G198500 Sobic002G252000 Sobic002G252000 Sobic010G060600--Sobic002G252000 Sobic003G294100 Sobic003G294100 Sobic010G060600--Sobic003G294100 Sobic008G168100 Sobic008G168100 Sobic009G059500--Sobic008G168100 Sobic002G271300 Sobic002G271300 Sobic009G059500--Sobic002G271300 Sobic002G186900 Sobic002G186900 Sobic009G059500--Sobic002G186900 Sobic008G126600 Sobic008G126600 Sobic009G059500--Sobic008G126600 Sobic009G059500--Sobic003G294100 Sobic008G141200 Sobic008G141200 Sobic009G059500--Sobic008G141200 Sobic001G228200 Sobic001G228200 Sobic009G059500--Sobic001G228200 Sobic004G054000 Sobic004G054000 Sobic009G059500--Sobic004G054000 Sobic007G044400 Sobic007G044400 Sobic009G059500--Sobic007G044400 Sobic007G034400 Sobic007G034400 Sobic005G164700--Sobic007G034400 Sobic002G115000 Sobic002G115000 Sobic005G164700--Sobic002G115000 Sobic006G201500 Sobic006G201500 Sobic005G164700--Sobic006G201500 Sobic002G045100 Sobic002G045100 Sobic005G164700--Sobic002G045100 Sobic008G135000 Sobic008G135000 Sobic005G164700--Sobic008G135000 Sobic001G085400 Sobic001G085400 Sobic005G164700--Sobic001G085400 Sobic008G021100 Sobic008G021100 Sobic005G164700--Sobic008G021100 Sobic001G058900 Sobic001G058900 Sobic005G164700--Sobic001G058900 Sobic006G156000 Sobic006G156000 Sobic005G164700--Sobic006G156000 Sobic002G392800 Sobic002G392800 Sobic001G112700--Sobic002G392800 Sobic001G242800 Sobic001G242800 Sobic001G112700--Sobic001G242800 Sobic002G353000 Sobic002G353000 Sobic001G112700--Sobic002G353000 Sobic006G002700 Sobic006G002700 Sobic001G112700--Sobic006G002700 Sobic001G096100 Sobic001G096100 Sobic001G112700--Sobic001G096100 Sobic002G309400 Sobic002G309400 Sobic001G112700--Sobic002G309400 Sobic003G290000 Sobic003G290000 Sobic001G112700--Sobic003G290000 Sobic009G126500 Sobic009G126500 Sobic001G112700--Sobic009G126500 Sobic001G112700--Sobic010G060600 Sobic009G088200 Sobic009G088200 Sobic002G280700--Sobic009G088200 Sobic001G528600 Sobic001G528600 Sobic002G280700--Sobic001G528600 Sobic007G152900 Sobic007G152900 Sobic002G280700--Sobic007G152900 Sobic010G032700 Sobic010G032700 Sobic002G280700--Sobic010G032700 Sobic003G396600 Sobic003G396600 Sobic002G280700--Sobic003G396600 Sobic001G371100 Sobic001G371100 Sobic002G280700--Sobic001G371100 Sobic002G280700--Sobic003G294100 Sobic002G280700--Sobic005G164700 Sobic001G397000 Sobic001G397000 Sobic002G280700--Sobic001G397000 Sobic008G004100--Sobic002G392800 Sobic008G004100--Sobic001G242800 Sobic009G213600 Sobic009G213600 Sobic008G004100--Sobic009G213600 Sobic006G230300 Sobic006G230300 Sobic008G004100--Sobic006G230300 Sobic009G102300 Sobic009G102300 Sobic008G004100--Sobic009G102300 Sobic004G161900 Sobic004G161900 Sobic008G004100--Sobic004G161900 Sobic010G218300 Sobic010G218300 Sobic008G004100--Sobic010G218300 Sobic008G004100--Sobic002G280700 Sobic001G476300 Sobic001G476300 Sobic008G004100--Sobic001G476300 Sobic002G075500 Sobic002G075500 Sobic002G332100--Sobic002G075500 Sobic001G436100 Sobic001G436100 Sobic002G332100--Sobic001G436100 Sobic004G212100 Sobic004G212100 Sobic002G332100--Sobic004G212100 Sobic002G342500 Sobic002G342500 Sobic002G332100--Sobic002G342500 Sobic001G196100 Sobic001G196100 Sobic002G332100--Sobic001G196100 Sobic001G338400 Sobic001G338400 Sobic002G332100--Sobic001G338400 Sobic001G116000 Sobic001G116000 Sobic002G332100--Sobic001G116000 Sobic002G332100--Sobic010G060600 Sobic010G253300 Sobic010G253300 Sobic002G332100--Sobic010G253300 Sobic009G079100 Sobic009G079100 Sobic003G198500--Sobic009G079100 Sobic010G090500 Sobic010G090500 Sobic003G198500--Sobic010G090500 Sobic001G073150 Sobic001G073150 Sobic003G198500--Sobic001G073150 Sobic003G366300 Sobic003G366300 Sobic003G198500--Sobic003G366300 Sobic002G312700 Sobic002G312700 Sobic003G198500--Sobic002G312700 Sobic004G051300 Sobic004G051300 Sobic003G198500--Sobic004G051300 Sobic009G246700 Sobic009G246700 Sobic003G198500--Sobic009G246700 Sobic010G022400 Sobic010G022400 Sobic003G198500--Sobic010G022400 Sobic008G174800 Sobic008G174800 Sobic003G198500--Sobic008G174800 Sobic002G128800 Sobic002G128800 Sobic002G252000--Sobic002G128800 Sobic002G338400 Sobic002G338400 Sobic002G252000--Sobic002G338400 Sobic001G418100 Sobic001G418100 Sobic002G252000--Sobic001G418100 Sobic002G396400 Sobic002G396400 Sobic002G252000--Sobic002G396400 Sobic002G252000--Sobic006G156000 Sobic001G038300 Sobic001G038300 Sobic002G252000--Sobic001G038300 Sobic001G107100 Sobic001G107100 Sobic002G252000--Sobic001G107100 Sobic003G443300 Sobic003G443300 Sobic002G252000--Sobic003G443300 Sobic003G219800 Sobic003G219800 Sobic002G252000--Sobic003G219800 Sobic003G294100--Sobic009G059500 Sobic003G294100--Sobic008G168100 Sobic003G294100--Sobic002G280700 Sobic001G157800 Sobic001G157800 Sobic003G294100--Sobic001G157800 Sobic009G250100 Sobic009G250100 Sobic003G294100--Sobic009G250100 Sobic003G294100--Sobic002G186900 Sobic003G294100--Sobic002G271300 Sobic003G294100--Sobic008G126600 Sobic003G294100--Sobic007G152900
Octagon: transcription factors


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