Gene annotation
Transcriptome id Sobic.003G181600.1
Synonym Sb03g023990
Functional annotation early-responsive to dehydration protein-related, putative, expressed
UniProt C5XMV4
Pfam PF14703 PF13967 PF02714
Panther DB PTHR13018 PTHR13018:SF48
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT4G22120 : ERD (early-responsive to dehydration stress) family protein
RAP-DB (Rice) LOC_Os01g35050.2 : early-responsive to dehydration protein-related, putative, expressed
MaizeGDB (Corn) Zm00025a022742 , Zm00025a028832
Brachypodium KQK08207 , KQK08048 , KQK08209 , KQK08208 , KQK08047 , KQK08210 , KQK08211
Barley HORVU3Hr1G045270.11 , HORVU3Hr1G045270.10 , HORVU3Hr1G045270.1 , HORVU3Hr1G045270.3 , HORVU3Hr1G045270.2 , HORVU1Hr1G007290.3 , HORVU3Hr1G045270.4 , HORVU3Hr1G045270.7 , HORVU3Hr1G045270.6 , HORVU3Hr1G045270.8 , HORVU1Hr1G007290.18 , HORVU1Hr1G007290.16 , HORVU1Hr1G007290.15 , HORVU1Hr1G007290.14 , HORVU1Hr1G007290.13 , HORVU1Hr1G007290.12 , HORVU1Hr1G007290.11 , HORVU1Hr1G007290.10 , HORVU1Hr1G004230.4 , HORVU1Hr1G004230.5 , HORVU1Hr1G004230.6 , HORVU1Hr1G004230.1 , HORVU1Hr1G004230.2 , HORVU1Hr1G004230.3 , HORVU1Hr1G007290.7 , HORVU1Hr1G007290.5 , HORVU1Hr1G007290.4 , HORVU3Hr1G045270.5 , HORVU1Hr1G007290.2 , HORVU3Hr1G045270.9
Wheat TraesCS3D02G201300 , TraesCS3D02G201300 , TraesCS3D02G201300 , TraesCS3B02G231400 , TraesCS3B02G231400 , TraesCS3B02G231400 , TraesCS3B02G231400 , TraesCS3B02G231400 , TraesCS1D02G035600
Populus -


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cDNA sequences
Sobic.003G181600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G164700 h/ACA ribonucleoprotein complex subunit 1-like protein 1, putative, expressed K11128: GAR1, H/ACA ribonucleoprotein complex subunit 1
2 Sobic.002G007100 eukaryotic translation initiation factor 5A, putative, expressed K03263: translation initiation factor 5A
3 Sobic.009G117000 expressed protein -
4 Sobic.010G029400 peptidase, T1 family, putative, expressed K02738: 20S proteasome subunit beta 1
5 Sobic.003G343900 expressed protein -
6 Sobic.008G103700 nitrilase-associated protein, putative, expressed K18635: protein SPIRAL1 and related proteins
7 Sobic.009G114400 expressed protein K14839: nucleolar protein 16
8 Sobic.006G156000 ferredoxin-thioredoxin reductase, variable chain, putative, expressed -
9 Sobic.008G058300 RNA polymerases N 8 kDa subunit, putative, expressed K03007: RPB10, DNA-directed RNA polymerases I, II, and III subunit RPABC5
10 Sobic.009G129500 cyclin, putative, expressed -
11 Sobic.001G085400 ribosomal protein L13, putative, expressed K02872: RP-L13Ae, large subunit ribosomal protein L13Ae
12 Sobic.010G018400 expressed protein K02153: ATPeV0E, V-type H+-transporting ATPase subunit e
13 Sobic.001G349500 ADP-ribosylation factor, putative, expressed K07952: ADP-ribosylation factor related protein 1
14 Sobic.002G115000 60S ribosomal protein L8, putative, expressed K02938: RP-L8e, large subunit ribosomal protein L8e
15 Sobic.004G322200 60S ribosomal protein L35a-3, putative, expressed K02917: RP-L35Ae, large subunit ribosomal protein L35Ae
16 Sobic.010G060600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
17 Sobic.009G026200 IQ calmodulin-binding motif domain containing protein, expressed -
18 Sobic.003G025200 ribosomal protein L5, putative, expressed K02868: RP-L11e, large subunit ribosomal protein L11e
19 Sobic.002G406500 elongation factor protein, putative, expressed K03232: elongation factor 1-beta
20 Sobic.007G034400 RNA recognition motif containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G181600 Sobic003G181600 Sobic005G164700 Sobic005G164700 Sobic003G181600--Sobic005G164700 Sobic002G007100 Sobic002G007100 Sobic003G181600--Sobic002G007100 Sobic009G117000 Sobic009G117000 Sobic003G181600--Sobic009G117000 Sobic010G029400 Sobic010G029400 Sobic003G181600--Sobic010G029400 Sobic003G343900 Sobic003G343900 Sobic003G181600--Sobic003G343900 Sobic008G103700 Sobic008G103700 Sobic003G181600--Sobic008G103700 Sobic009G114400 Sobic009G114400 Sobic003G181600--Sobic009G114400 Sobic006G156000 Sobic006G156000 Sobic003G181600--Sobic006G156000 Sobic008G058300 Sobic008G058300 Sobic003G181600--Sobic008G058300 Sobic007G034400 Sobic007G034400 Sobic005G164700--Sobic007G034400 Sobic002G115000 Sobic002G115000 Sobic005G164700--Sobic002G115000 Sobic006G201500 Sobic006G201500 Sobic005G164700--Sobic006G201500 Sobic002G045100 Sobic002G045100 Sobic005G164700--Sobic002G045100 Sobic008G135000 Sobic008G135000 Sobic005G164700--Sobic008G135000 Sobic001G085400 Sobic001G085400 Sobic005G164700--Sobic001G085400 Sobic008G021100 Sobic008G021100 Sobic005G164700--Sobic008G021100 Sobic001G058900 Sobic001G058900 Sobic005G164700--Sobic001G058900 Sobic005G164700--Sobic006G156000 Sobic005G157200 Sobic005G157200 Sobic002G007100--Sobic005G157200 Sobic003G025200 Sobic003G025200 Sobic002G007100--Sobic003G025200 Sobic002G007100--Sobic010G029400 Sobic002G007100--Sobic008G058300 Sobic002G406500 Sobic002G406500 Sobic002G007100--Sobic002G406500 Sobic004G196400 Sobic004G196400 Sobic002G007100--Sobic004G196400 Sobic002G007100--Sobic006G201500 Sobic003G280700 Sobic003G280700 Sobic002G007100--Sobic003G280700 Sobic006G081100 Sobic006G081100 Sobic002G007100--Sobic006G081100 Sobic006G211200 Sobic006G211200 Sobic009G117000--Sobic006G211200 Sobic007G019000 Sobic007G019000 Sobic009G117000--Sobic007G019000 Sobic009G117000--Sobic002G115000 Sobic001G377800 Sobic001G377800 Sobic009G117000--Sobic001G377800 Sobic004G322200 Sobic004G322200 Sobic009G117000--Sobic004G322200 Sobic006G138100 Sobic006G138100 Sobic009G117000--Sobic006G138100 Sobic009G117000--Sobic008G058300 Sobic006G216600 Sobic006G216600 Sobic009G117000--Sobic006G216600 Sobic006G052400 Sobic006G052400 Sobic009G117000--Sobic006G052400 Sobic008G132800 Sobic008G132800 Sobic010G029400--Sobic008G132800 Sobic002G078400 Sobic002G078400 Sobic010G029400--Sobic002G078400 Sobic010G029400--Sobic003G025200 Sobic010G029400--Sobic002G406500 Sobic010G029400--Sobic002G115000 Sobic010G029400--Sobic005G157200 Sobic010G029400--Sobic008G058300 Sobic010G029400--Sobic001G377800 Sobic009G016201 Sobic009G016201 Sobic010G029400--Sobic009G016201 Sobic001G494000 Sobic001G494000 Sobic003G343900--Sobic001G494000 Sobic001G009500 Sobic001G009500 Sobic003G343900--Sobic001G009500 Sobic010G252500 Sobic010G252500 Sobic003G343900--Sobic010G252500 Sobic001G389000 Sobic001G389000 Sobic003G343900--Sobic001G389000 Sobic008G106700 Sobic008G106700 Sobic003G343900--Sobic008G106700 Sobic009G179900 Sobic009G179900 Sobic003G343900--Sobic009G179900 Sobic005G093000 Sobic005G093000 Sobic003G343900--Sobic005G093000 Sobic003G429000 Sobic003G429000 Sobic003G343900--Sobic003G429000 Sobic003G417350 Sobic003G417350 Sobic003G343900--Sobic003G417350 Sobic004G024300 Sobic004G024300 Sobic008G103700--Sobic004G024300 Sobic001G034700 Sobic001G034700 Sobic008G103700--Sobic001G034700 Sobic010G238800 Sobic010G238800 Sobic008G103700--Sobic010G238800 Sobic003G306100 Sobic003G306100 Sobic008G103700--Sobic003G306100 Sobic003G344600 Sobic003G344600 Sobic008G103700--Sobic003G344600 Sobic003G443300 Sobic003G443300 Sobic008G103700--Sobic003G443300 Sobic002G335300 Sobic002G335300 Sobic008G103700--Sobic002G335300 Sobic002G128800 Sobic002G128800 Sobic008G103700--Sobic002G128800 Sobic001G432000 Sobic001G432000 Sobic008G103700--Sobic001G432000 Sobic001G225700 Sobic001G225700 Sobic009G114400--Sobic001G225700 Sobic002G049300 Sobic002G049300 Sobic009G114400--Sobic002G049300 Sobic009G114400--Sobic001G085400 Sobic007G178600 Sobic007G178600 Sobic009G114400--Sobic007G178600 Sobic009G227400 Sobic009G227400 Sobic009G114400--Sobic009G227400 Sobic009G144300 Sobic009G144300 Sobic009G114400--Sobic009G144300 Sobic003G249700 Sobic003G249700 Sobic009G114400--Sobic003G249700 Sobic006G221200 Sobic006G221200 Sobic009G114400--Sobic006G221200 Sobic009G114400--Sobic006G081100 Sobic006G156000--Sobic003G443300 Sobic006G156000--Sobic001G432000 Sobic005G168100 Sobic005G168100 Sobic006G156000--Sobic005G168100 Sobic003G219800 Sobic003G219800 Sobic006G156000--Sobic003G219800 Sobic001G084100 Sobic001G084100 Sobic006G156000--Sobic001G084100 Sobic001G304400 Sobic001G304400 Sobic006G156000--Sobic001G304400 Sobic009G212200 Sobic009G212200 Sobic006G156000--Sobic009G212200 Sobic002G361700 Sobic002G361700 Sobic006G156000--Sobic002G361700 Sobic001G040100 Sobic001G040100 Sobic006G156000--Sobic001G040100 Sobic008G058300--Sobic005G157200 Sobic008G058300--Sobic003G025200 Sobic001G331900 Sobic001G331900 Sobic008G058300--Sobic001G331900 Sobic008G058300--Sobic006G052400 Sobic004G300900 Sobic004G300900 Sobic008G058300--Sobic004G300900 Sobic008G058300--Sobic010G029400 Sobic004G002350 Sobic004G002350 Sobic008G058300--Sobic004G002350 Sobic008G058300--Sobic002G078400 Sobic008G058300--Sobic001G377800
Octagon: transcription factors


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