Gene annotation
Transcriptome id Sobic.001G349500.1
Synonym Sb01g033450, GB1, ATARLB1, ATGB1
Functional annotation ADP-ribosylation factor, putative, expressed
UniProt C5WXP0
Pfam PF00071
Panther DB PTHR11711 PTHR11711:SF187
NCBI CDD KOG0076; GTP-binding ADP-ribosylation factor-like protein yARL3
KEGG Orthology K07952; ADP-ribosylation factor related protein 1
Gene Ontology GO:0007264; small GTPase mediated signal transduction GO:0005525GTP binding


Orthologs (automatic annotation)
TAIR AT5G52210 : GTP-binding protein 1
RAP-DB (Rice) LOC_Os03g27450.1 : ADP-ribosylation factor, putative, expressed
MaizeGDB (Corn) Zm00025a002740
Brachypodium KQK21417 , KQK15201 , KQK15200 , KQK15203 , KQK15202 , PNT74737
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G349500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G153100 prefoldin, putative, expressed K14009: BCAP31, B-cell receptor-associated protein 31
2 Sobic.010G257100 CGMC_MAPKCMGC_2.11 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
3 Sobic.009G094450 - -
4 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
5 Sobic.004G157800 LITAF-domain-containing protein, putative, expressed K19363: lipopolysaccharide-induced tumor necrosis factor-alpha factor
6 Sobic.004G048700 SCO1 protein homolog, mitochondrial precursor, putative, expressed K07152: protein SCO1
7 Sobic.002G301400 expressed protein -
8 Sobic.001G331900 expressed protein -
9 Sobic.004G300900 OsGrx_C3 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
10 Sobic.006G262900 expressed protein -
11 Sobic.001G529000 THO complex subunit 7, putative, expressed K13176: THO complex subunit 7
12 Sobic.009G129500 cyclin, putative, expressed -
13 Sobic.002G335300 uncharacterized Cys-rich domain containing protein, putative, expressed -
14 Sobic.004G103600 actin-related protein 2/3 complex subunit 3, putative, expressed K05756: actin related protein 2/3 complex, subunit 3
15 Sobic.003G181600 early-responsive to dehydration protein-related, putative, expressed -
16 Sobic.006G150600 hydrolase, putative, expressed K14664: IAA-amino acid hydrolase
17 Sobic.010G209900 phospholipase D. Active site motif family protein, expressed K16860: phospholipase D3/4
18 Sobic.001G309500 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
19 Sobic.002G282400 expressed protein -
20 Sobic.007G030700 transporter, putative, expressed -


Gene co-expression network
sample Sobic001G349500 Sobic001G349500 Sobic010G153100 Sobic010G153100 Sobic001G349500--Sobic010G153100 Sobic010G257100 Sobic010G257100 Sobic001G349500--Sobic010G257100 Sobic009G094450 Sobic009G094450 Sobic001G349500--Sobic009G094450 Sobic002G078400 Sobic002G078400 Sobic001G349500--Sobic002G078400 Sobic004G157800 Sobic004G157800 Sobic001G349500--Sobic004G157800 Sobic004G048700 Sobic004G048700 Sobic001G349500--Sobic004G048700 Sobic002G301400 Sobic002G301400 Sobic001G349500--Sobic002G301400 Sobic001G331900 Sobic001G331900 Sobic001G349500--Sobic001G331900 Sobic004G300900 Sobic004G300900 Sobic001G349500--Sobic004G300900 Sobic001G084900 Sobic001G084900 Sobic010G153100--Sobic001G084900 Sobic001G224400 Sobic001G224400 Sobic010G153100--Sobic001G224400 Sobic003G155400 Sobic003G155400 Sobic010G153100--Sobic003G155400 Sobic001G445800 Sobic001G445800 Sobic010G153100--Sobic001G445800 Sobic010G154700 Sobic010G154700 Sobic010G153100--Sobic010G154700 Sobic010G213400 Sobic010G213400 Sobic010G153100--Sobic010G213400 Sobic007G115100 Sobic007G115100 Sobic010G153100--Sobic007G115100 Sobic001G067601 Sobic001G067601 Sobic010G153100--Sobic001G067601 Sobic006G141500 Sobic006G141500 Sobic010G153100--Sobic006G141500 Sobic001G019900 Sobic001G019900 Sobic010G257100--Sobic001G019900 Sobic010G257100--Sobic001G084900 Sobic003G321700 Sobic003G321700 Sobic010G257100--Sobic003G321700 Sobic003G249800 Sobic003G249800 Sobic010G257100--Sobic003G249800 Sobic005G092800 Sobic005G092800 Sobic010G257100--Sobic005G092800 Sobic010G243200 Sobic010G243200 Sobic010G257100--Sobic010G243200 Sobic004G026400 Sobic004G026400 Sobic010G257100--Sobic004G026400 Sobic010G257100--Sobic010G153100 Sobic003G072300 Sobic003G072300 Sobic010G257100--Sobic003G072300 Sobic005G228000 Sobic005G228000 Sobic009G094450--Sobic005G228000 Sobic009G094450--Sobic010G153100 Sobic009G094450--Sobic005G092800 Sobic009G094450--Sobic001G019900 Sobic009G094450--Sobic004G026400 Sobic009G094450--Sobic001G445800 Sobic009G094450--Sobic001G067601 Sobic010G217900 Sobic010G217900 Sobic009G094450--Sobic010G217900 Sobic009G094450--Sobic003G321700 Sobic002G078400--Sobic004G300900 Sobic010G065400 Sobic010G065400 Sobic002G078400--Sobic010G065400 Sobic003G362400 Sobic003G362400 Sobic002G078400--Sobic003G362400 Sobic007G091000 Sobic007G091000 Sobic002G078400--Sobic007G091000 Sobic008G132800 Sobic008G132800 Sobic002G078400--Sobic008G132800 Sobic002G078400--Sobic001G445800 Sobic002G078400--Sobic001G331900 Sobic009G198500 Sobic009G198500 Sobic002G078400--Sobic009G198500 Sobic010G029400 Sobic010G029400 Sobic002G078400--Sobic010G029400 Sobic001G064800 Sobic001G064800 Sobic004G157800--Sobic001G064800 Sobic004G157800--Sobic002G078400 Sobic006G182100 Sobic006G182100 Sobic004G157800--Sobic006G182100 Sobic009G249000 Sobic009G249000 Sobic004G157800--Sobic009G249000 Sobic004G157800--Sobic009G094450 Sobic001G526100 Sobic001G526100 Sobic004G157800--Sobic001G526100 Sobic004G157800--Sobic005G092800 Sobic004G157800--Sobic001G445800 Sobic001G403700 Sobic001G403700 Sobic004G157800--Sobic001G403700 Sobic004G122000 Sobic004G122000 Sobic004G048700--Sobic004G122000 Sobic007G219800 Sobic007G219800 Sobic004G048700--Sobic007G219800 Sobic003G358300 Sobic003G358300 Sobic004G048700--Sobic003G358300 Sobic009G086200 Sobic009G086200 Sobic004G048700--Sobic009G086200 Sobic004G048700--Sobic010G153100 Sobic007G192100 Sobic007G192100 Sobic004G048700--Sobic007G192100 Sobic006G239300 Sobic006G239300 Sobic004G048700--Sobic006G239300 Sobic003G281200 Sobic003G281200 Sobic004G048700--Sobic003G281200 Sobic007G038800 Sobic007G038800 Sobic004G048700--Sobic007G038800 Sobic002G353000 Sobic002G353000 Sobic002G301400--Sobic002G353000 Sobic003G124800 Sobic003G124800 Sobic002G301400--Sobic003G124800 Sobic001G529000 Sobic001G529000 Sobic002G301400--Sobic001G529000 Sobic006G232200 Sobic006G232200 Sobic002G301400--Sobic006G232200 Sobic009G232400 Sobic009G232400 Sobic002G301400--Sobic009G232400 Sobic006G262900 Sobic006G262900 Sobic002G301400--Sobic006G262900 Sobic001G402300 Sobic001G402300 Sobic002G301400--Sobic001G402300 Sobic004G224800 Sobic004G224800 Sobic002G301400--Sobic004G224800 Sobic010G039800 Sobic010G039800 Sobic002G301400--Sobic010G039800 Sobic004G107600 Sobic004G107600 Sobic001G331900--Sobic004G107600 Sobic005G157200 Sobic005G157200 Sobic001G331900--Sobic005G157200 Sobic008G058300 Sobic008G058300 Sobic001G331900--Sobic008G058300 Sobic001G331900--Sobic002G078400 Sobic001G331900--Sobic008G132800 Sobic001G331900--Sobic004G300900 Sobic001G377800 Sobic001G377800 Sobic001G331900--Sobic001G377800 Sobic001G331900--Sobic003G362400 Sobic001G331900--Sobic001G529000 Sobic004G300900--Sobic002G078400 Sobic004G300900--Sobic006G141500 Sobic004G300900--Sobic009G198500 Sobic004G300900--Sobic001G331900 Sobic001G005900 Sobic001G005900 Sobic004G300900--Sobic001G005900 Sobic004G225500 Sobic004G225500 Sobic004G300900--Sobic004G225500 Sobic004G300900--Sobic008G058300 Sobic003G115800 Sobic003G115800 Sobic004G300900--Sobic003G115800 Sobic004G300900--Sobic001G445800
Octagon: transcription factors


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