Gene annotation
Transcriptome id Sobic.009G129500.1
Synonym 1, Sb09g019600, CYCP1
Functional annotation cyclin, putative, expressed
UniProt C5YXL8
Pfam PF00134
Panther DB PTHR15615 PTHR15615:SF20
NCBI CDD KOG1674; Cyclin
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G44740 : cyclin p4;1
RAP-DB (Rice) LOC_Os05g33040.2 : cyclin, putative, expressed
MaizeGDB (Corn) Zm00025a043619
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G024600 "RSR1(Ortholog in rice:Fu and Xue, 2010)"(PubMedID : 31659916)@"AP2-like TF, coexpress with genes associated with the hormonesignaling pathway, floral development in Arabidopsis"(PubMedID : 28944535)@AP2 domain containing protein, expressed K09284: AP2-like factor, euAP2 lineage
2 Sobic.001G131100 expressed protein -
3 Sobic.009G117000 expressed protein -
4 Sobic.001G445000 cation efflux family protein, putative, expressed -
5 Sobic.001G129300 ribosomal L18p/L5e family protein, putative, expressed -
6 Sobic.008G058300 RNA polymerases N 8 kDa subunit, putative, expressed K03007: RPB10, DNA-directed RNA polymerases I, II, and III subunit RPABC5
7 Sobic.001G349500 ADP-ribosylation factor, putative, expressed K07952: ADP-ribosylation factor related protein 1
8 Sobic.002G278300 thaumatin, putative, expressed -
9 Sobic.003G181600 early-responsive to dehydration protein-related, putative, expressed -
10 Sobic.001G089100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
11 Sobic.001G208300 Ser/Thr protein phosphatase family protein, putative, expressed -
12 Sobic.006G262900 expressed protein -
13 Sobic.006G052400 LSM domain containing protein, expressed K12625: U6 snRNA-associated Sm-like protein LSm6
14 Sobic.001G516500 expansin precursor, putative, expressed -
15 Sobic.002G376400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.001G294000 LOL3, putative, expressed -
17 Sobic.003G055500 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
18 Sobic.009G249000 CAMK_CAMK_like.5 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
19 Sobic.008G106800 isoflavone reductase, putative, expressed -
20 Sobic.006G150600 hydrolase, putative, expressed K14664: IAA-amino acid hydrolase


Gene co-expression network
sample Sobic009G129500 Sobic009G129500 Sobic009G024600 Sobic009G024600 Sobic009G129500--Sobic009G024600 Sobic001G131100 Sobic001G131100 Sobic009G129500--Sobic001G131100 Sobic009G117000 Sobic009G117000 Sobic009G129500--Sobic009G117000 Sobic001G445000 Sobic001G445000 Sobic009G129500--Sobic001G445000 Sobic001G129300 Sobic001G129300 Sobic009G129500--Sobic001G129300 Sobic008G058300 Sobic008G058300 Sobic009G129500--Sobic008G058300 Sobic001G349500 Sobic001G349500 Sobic009G129500--Sobic001G349500 Sobic002G278300 Sobic002G278300 Sobic009G129500--Sobic002G278300 Sobic003G181600 Sobic003G181600 Sobic009G129500--Sobic003G181600 Sobic009G024600--Sobic009G129500 Sobic005G000100 Sobic005G000100 Sobic009G024600--Sobic005G000100 Sobic009G024600--Sobic001G131100 Sobic005G107300 Sobic005G107300 Sobic009G024600--Sobic005G107300 Sobic004G014000 Sobic004G014000 Sobic009G024600--Sobic004G014000 Sobic003G116700 Sobic003G116700 Sobic009G024600--Sobic003G116700 Sobic007G079700 Sobic007G079700 Sobic009G024600--Sobic007G079700 Sobic002G016300 Sobic002G016300 Sobic009G024600--Sobic002G016300 Sobic001G208300 Sobic001G208300 Sobic009G024600--Sobic001G208300 Sobic001G131100--Sobic009G129500 Sobic002G303700 Sobic002G303700 Sobic001G131100--Sobic002G303700 Sobic010G122800 Sobic010G122800 Sobic001G131100--Sobic010G122800 Sobic001G131100--Sobic009G024600 Sobic006G014000 Sobic006G014000 Sobic001G131100--Sobic006G014000 Sobic009G102300 Sobic009G102300 Sobic001G131100--Sobic009G102300 Sobic001G131100--Sobic005G000100 Sobic001G131100--Sobic001G445000 Sobic002G392800 Sobic002G392800 Sobic001G131100--Sobic002G392800 Sobic006G211200 Sobic006G211200 Sobic009G117000--Sobic006G211200 Sobic007G019000 Sobic007G019000 Sobic009G117000--Sobic007G019000 Sobic002G115000 Sobic002G115000 Sobic009G117000--Sobic002G115000 Sobic001G377800 Sobic001G377800 Sobic009G117000--Sobic001G377800 Sobic004G322200 Sobic004G322200 Sobic009G117000--Sobic004G322200 Sobic006G138100 Sobic006G138100 Sobic009G117000--Sobic006G138100 Sobic009G117000--Sobic008G058300 Sobic006G216600 Sobic006G216600 Sobic009G117000--Sobic006G216600 Sobic006G052400 Sobic006G052400 Sobic009G117000--Sobic006G052400 Sobic001G445000--Sobic009G129500 Sobic007G009000 Sobic007G009000 Sobic001G445000--Sobic007G009000 Sobic001G112800 Sobic001G112800 Sobic001G445000--Sobic001G112800 Sobic004G001000 Sobic004G001000 Sobic001G445000--Sobic004G001000 Sobic001G242800 Sobic001G242800 Sobic001G445000--Sobic001G242800 Sobic001G445000--Sobic009G117000 Sobic002G319200 Sobic002G319200 Sobic001G445000--Sobic002G319200 Sobic001G445000--Sobic001G131100 Sobic001G445000--Sobic002G392800 Sobic001G136900 Sobic001G136900 Sobic001G129300--Sobic001G136900 Sobic006G262900 Sobic006G262900 Sobic001G129300--Sobic006G262900 Sobic001G543300 Sobic001G543300 Sobic001G129300--Sobic001G543300 Sobic007G126200 Sobic007G126200 Sobic001G129300--Sobic007G126200 Sobic006G183000 Sobic006G183000 Sobic001G129300--Sobic006G183000 Sobic003G250500 Sobic003G250500 Sobic001G129300--Sobic003G250500 Sobic009G033900 Sobic009G033900 Sobic001G129300--Sobic009G033900 Sobic003G226500 Sobic003G226500 Sobic001G129300--Sobic003G226500 Sobic007G167700 Sobic007G167700 Sobic001G129300--Sobic007G167700 Sobic005G157200 Sobic005G157200 Sobic008G058300--Sobic005G157200 Sobic003G025200 Sobic003G025200 Sobic008G058300--Sobic003G025200 Sobic001G331900 Sobic001G331900 Sobic008G058300--Sobic001G331900 Sobic008G058300--Sobic006G052400 Sobic004G300900 Sobic004G300900 Sobic008G058300--Sobic004G300900 Sobic010G029400 Sobic010G029400 Sobic008G058300--Sobic010G029400 Sobic004G002350 Sobic004G002350 Sobic008G058300--Sobic004G002350 Sobic002G078400 Sobic002G078400 Sobic008G058300--Sobic002G078400 Sobic008G058300--Sobic001G377800 Sobic010G153100 Sobic010G153100 Sobic001G349500--Sobic010G153100 Sobic010G257100 Sobic010G257100 Sobic001G349500--Sobic010G257100 Sobic009G094450 Sobic009G094450 Sobic001G349500--Sobic009G094450 Sobic001G349500--Sobic002G078400 Sobic004G157800 Sobic004G157800 Sobic001G349500--Sobic004G157800 Sobic004G048700 Sobic004G048700 Sobic001G349500--Sobic004G048700 Sobic002G301400 Sobic002G301400 Sobic001G349500--Sobic002G301400 Sobic001G349500--Sobic001G331900 Sobic001G349500--Sobic004G300900 Sobic003G436800 Sobic003G436800 Sobic002G278300--Sobic003G436800 Sobic009G055100 Sobic009G055100 Sobic002G278300--Sobic009G055100 Sobic009G040900 Sobic009G040900 Sobic002G278300--Sobic009G040900 Sobic009G159200 Sobic009G159200 Sobic002G278300--Sobic009G159200 Sobic001G056700 Sobic001G056700 Sobic002G278300--Sobic001G056700 Sobic009G166700 Sobic009G166700 Sobic002G278300--Sobic009G166700 Sobic007G177100 Sobic007G177100 Sobic002G278300--Sobic007G177100 Sobic004G069200 Sobic004G069200 Sobic002G278300--Sobic004G069200 Sobic009G075900 Sobic009G075900 Sobic002G278300--Sobic009G075900 Sobic005G164700 Sobic005G164700 Sobic003G181600--Sobic005G164700 Sobic002G007100 Sobic002G007100 Sobic003G181600--Sobic002G007100 Sobic003G181600--Sobic009G117000 Sobic003G181600--Sobic010G029400 Sobic003G343900 Sobic003G343900 Sobic003G181600--Sobic003G343900 Sobic008G103700 Sobic008G103700 Sobic003G181600--Sobic008G103700 Sobic009G114400 Sobic009G114400 Sobic003G181600--Sobic009G114400 Sobic006G156000 Sobic006G156000 Sobic003G181600--Sobic006G156000 Sobic003G181600--Sobic008G058300
Octagon: transcription factors


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