Gene annotation
Transcriptome id Sobic.002G376400.1,Sobic.002G376400.3,Sobic.002G376400.2
Synonym Sb02g039400
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1W0W798 , A0A1B6QFK0
Pfam -
Panther DB PTHR33676 PTHR33676:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G33980 : -
RAP-DB (Rice) LOC_Os07g42650.1 : expressed protein
MaizeGDB (Corn) Zm00025a015224
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATP-dependent protease, putative, expressed -
2 Sobic.004G216700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 21930910)@-(PubMedID : 24884377)@response regulator receiver domain containing protein, expressed K12127: TOC1, pseudo-response regulator 1
3 Sobic.003G401400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed -
4 Sobic.008G185900 RNA recognition motif containing protein, expressed -
5 Sobic.009G129500 cyclin, putative, expressed -
6 Sobic.009G159700 expressed protein -
7 Sobic.009G166801 - -
8 Sobic.005G172300 OsFBDUF60 - F-box and DUF domain containing protein, expressed -
9 Sobic.010G072300 sucrose synthase(PubMedID : 26616172)@"Sh1(Ortholog in maize:Jiang et al., 2013)"(PubMedID : 31659931)@sucrose synthase, putative, expressed K00695: sucrose synthase
10 Sobic.001G516500 expansin precursor, putative, expressed -
11 Sobic.007G223701 - -
12 Sobic.001G141300 RNA recognition motif containing protein, expressed -
13 Sobic.002G338300 expressed protein -
14 Sobic.001G480400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.003G128000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
16 Sobic.002G278300 thaumatin, putative, expressed -
17 Sobic.005G050200 abscisic stress-ripening, putative, expressed -
18 Sobic.006G159400 - -
19 Sobic.001G040300 expressed protein -
20 Sobic.009G013900 ankyrin repeat domain-containing protein 28, putative, expressed -


Gene co-expression network
sample Sobic002G376400 Sobic002G376400 Sobic001G341300 Sobic001G341300 Sobic002G376400--Sobic001G341300 Sobic004G216700 Sobic004G216700 Sobic002G376400--Sobic004G216700 Sobic003G401400 Sobic003G401400 Sobic002G376400--Sobic003G401400 Sobic008G185900 Sobic008G185900 Sobic002G376400--Sobic008G185900 Sobic009G129500 Sobic009G129500 Sobic002G376400--Sobic009G129500 Sobic009G159700 Sobic009G159700 Sobic002G376400--Sobic009G159700 Sobic009G166801 Sobic009G166801 Sobic002G376400--Sobic009G166801 Sobic005G172300 Sobic005G172300 Sobic002G376400--Sobic005G172300 Sobic010G072300 Sobic010G072300 Sobic002G376400--Sobic010G072300 Sobic001G341300--Sobic002G376400 Sobic006G159400 Sobic006G159400 Sobic001G341300--Sobic006G159400 Sobic001G341300--Sobic004G216700 Sobic001G341300--Sobic009G159700 Sobic001G341300--Sobic008G185900 Sobic001G341300--Sobic009G166801 Sobic001G253600 Sobic001G253600 Sobic001G341300--Sobic001G253600 Sobic001G516500 Sobic001G516500 Sobic001G341300--Sobic001G516500 Sobic001G341300--Sobic005G172300 Sobic004G216700--Sobic002G376400 Sobic005G085100 Sobic005G085100 Sobic004G216700--Sobic005G085100 Sobic004G216700--Sobic001G341300 Sobic001G480400 Sobic001G480400 Sobic004G216700--Sobic001G480400 Sobic010G143400 Sobic010G143400 Sobic004G216700--Sobic010G143400 Sobic004G216700--Sobic009G159700 Sobic006G241200 Sobic006G241200 Sobic004G216700--Sobic006G241200 Sobic008G013900 Sobic008G013900 Sobic004G216700--Sobic008G013900 Sobic007G189800 Sobic007G189800 Sobic004G216700--Sobic007G189800 Sobic001G141300 Sobic001G141300 Sobic003G401400--Sobic001G141300 Sobic003G401400--Sobic008G185900 Sobic003G401400--Sobic002G376400 Sobic001G081400 Sobic001G081400 Sobic003G401400--Sobic001G081400 Sobic004G309500 Sobic004G309500 Sobic003G401400--Sobic004G309500 Sobic007G034400 Sobic007G034400 Sobic003G401400--Sobic007G034400 Sobic008G171800 Sobic008G171800 Sobic003G401400--Sobic008G171800 Sobic001G202400 Sobic001G202400 Sobic003G401400--Sobic001G202400 Sobic004G028400 Sobic004G028400 Sobic003G401400--Sobic004G028400 Sobic008G185900--Sobic001G141300 Sobic008G185900--Sobic003G401400 Sobic008G185900--Sobic001G341300 Sobic008G185900--Sobic002G376400 Sobic008G133500 Sobic008G133500 Sobic008G185900--Sobic008G133500 Sobic002G279100 Sobic002G279100 Sobic008G185900--Sobic002G279100 Sobic008G185900--Sobic004G216700 Sobic008G185900--Sobic008G171800 Sobic008G185900--Sobic006G241200 Sobic009G024600 Sobic009G024600 Sobic009G129500--Sobic009G024600 Sobic001G131100 Sobic001G131100 Sobic009G129500--Sobic001G131100 Sobic009G117000 Sobic009G117000 Sobic009G129500--Sobic009G117000 Sobic001G445000 Sobic001G445000 Sobic009G129500--Sobic001G445000 Sobic001G129300 Sobic001G129300 Sobic009G129500--Sobic001G129300 Sobic008G058300 Sobic008G058300 Sobic009G129500--Sobic008G058300 Sobic001G349500 Sobic001G349500 Sobic009G129500--Sobic001G349500 Sobic002G278300 Sobic002G278300 Sobic009G129500--Sobic002G278300 Sobic003G181600 Sobic003G181600 Sobic009G129500--Sobic003G181600 Sobic005G085200 Sobic005G085200 Sobic009G159700--Sobic005G085200 Sobic005G085600 Sobic005G085600 Sobic009G159700--Sobic005G085600 Sobic004G285800 Sobic004G285800 Sobic009G159700--Sobic004G285800 Sobic009G159700--Sobic009G166801 Sobic010G057300 Sobic010G057300 Sobic009G159700--Sobic010G057300 Sobic009G159700--Sobic007G189800 Sobic009G159700--Sobic006G241200 Sobic004G345900 Sobic004G345900 Sobic009G159700--Sobic004G345900 Sobic010G057400 Sobic010G057400 Sobic009G159700--Sobic010G057400 Sobic009G166801--Sobic009G159700 Sobic009G030100 Sobic009G030100 Sobic009G166801--Sobic009G030100 Sobic009G166801--Sobic004G285800 Sobic010G110700 Sobic010G110700 Sobic009G166801--Sobic010G110700 Sobic009G166801--Sobic001G341300 Sobic003G293900 Sobic003G293900 Sobic009G166801--Sobic003G293900 Sobic002G338300 Sobic002G338300 Sobic009G166801--Sobic002G338300 Sobic009G166801--Sobic005G085600 Sobic006G269200 Sobic006G269200 Sobic009G166801--Sobic006G269200 Sobic005G172300--Sobic001G341300 Sobic002G380000 Sobic002G380000 Sobic005G172300--Sobic002G380000 Sobic005G172300--Sobic002G376400 Sobic003G107400 Sobic003G107400 Sobic005G172300--Sobic003G107400 Sobic004G196400 Sobic004G196400 Sobic005G172300--Sobic004G196400 Sobic004G152400 Sobic004G152400 Sobic005G172300--Sobic004G152400 Sobic005G178700 Sobic005G178700 Sobic005G172300--Sobic005G178700 Sobic006G242300 Sobic006G242300 Sobic005G172300--Sobic006G242300 Sobic001G467300 Sobic001G467300 Sobic005G172300--Sobic001G467300 Sobic004G069200 Sobic004G069200 Sobic010G072300--Sobic004G069200 Sobic008G132700 Sobic008G132700 Sobic010G072300--Sobic008G132700 Sobic001G201100 Sobic001G201100 Sobic010G072300--Sobic001G201100 Sobic002G312900 Sobic002G312900 Sobic010G072300--Sobic002G312900 Sobic007G009100 Sobic007G009100 Sobic010G072300--Sobic007G009100 Sobic009G179900 Sobic009G179900 Sobic010G072300--Sobic009G179900 Sobic010G257100 Sobic010G257100 Sobic010G072300--Sobic010G257100 Sobic010G260100 Sobic010G260100 Sobic010G072300--Sobic010G260100 Sobic010G259900 Sobic010G259900 Sobic010G072300--Sobic010G259900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.