Gene annotation
Transcriptome id Sobic.008G185900.1
Synonym GR-RBP7, CCR2, Sb08g022740, ATGRP7, GRP7
Functional annotation RNA recognition motif containing protein, expressed
UniProt C5YSY6 , Q99069
Pfam PF00076
Panther DB PTHR24012
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003676; nucleic acid binding


Orthologs (automatic annotation)
TAIR AT2G21660 : cold, circadian rhythm, and rna binding 2
RAP-DB (Rice) LOC_Os12g43600.1 : RNA recognition motif containing protein, expressed
MaizeGDB (Corn) Zm00025a025109 , Zm00025a004811
Brachypodium KQJ85674 , KQK13837
Barley HORVU5Hr1G002150.9 , HORVU5Hr1G002150.3 , HORVU5Hr1G002150.10 , HORVU5Hr1G002150.1
Wheat TraesCS5A02G015000 , TraesCS5D02G020900 , TraesCS4D02G018500 , TraesCS4B02G020300 , TraesCS4A02G293000 , TraesCS5B02G013200
Populus -


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cDNA sequences
Sobic.008G185900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G141300 RNA recognition motif containing protein, expressed -
2 Sobic.003G401400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed -
3 Sobic.001G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATP-dependent protease, putative, expressed -
4 Sobic.002G376400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.008G133500 diaminopimelate epimerase, chloroplast precursor, putative, expressed K01778: diaminopimelate epimerase
6 Sobic.002G279100 "Syntelog of ZmMYB31, bind to the COMT1, CSE, and 4CL2 promroter region."(PubMedID : 30387379)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.004G216700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 21930910)@-(PubMedID : 24884377)@response regulator receiver domain containing protein, expressed K12127: TOC1, pseudo-response regulator 1
8 Sobic.008G171800 WD domain, G-beta repeat domain containing protein, expressed K14830: MAK11, protein MAK11
9 Sobic.006G241200 expressed protein -
10 Sobic.002G338300 expressed protein -
11 Sobic.009G197000 O-methyltransferase family 2 protein (At)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
12 Sobic.001G254400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized oxidoreductase, putative, expressed -
13 Sobic.006G279800 expressed protein -
14 Sobic.009G159700 expressed protein -
15 Sobic.003G128000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
16 Sobic.004G309500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.003G183900 pentatricopeptide, putative, expressed -
18 Sobic.010G143400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.001G081400 ankyrin repeat domain containing protein, putative, expressed K18477: type IV protein arginine methyltransferase
20 Sobic.004G077000 expressed protein -


Gene co-expression network
sample Sobic008G185900 Sobic008G185900 Sobic001G141300 Sobic001G141300 Sobic008G185900--Sobic001G141300 Sobic003G401400 Sobic003G401400 Sobic008G185900--Sobic003G401400 Sobic001G341300 Sobic001G341300 Sobic008G185900--Sobic001G341300 Sobic002G376400 Sobic002G376400 Sobic008G185900--Sobic002G376400 Sobic008G133500 Sobic008G133500 Sobic008G185900--Sobic008G133500 Sobic002G279100 Sobic002G279100 Sobic008G185900--Sobic002G279100 Sobic004G216700 Sobic004G216700 Sobic008G185900--Sobic004G216700 Sobic008G171800 Sobic008G171800 Sobic008G185900--Sobic008G171800 Sobic006G241200 Sobic006G241200 Sobic008G185900--Sobic006G241200 Sobic001G141300--Sobic008G185900 Sobic001G141300--Sobic003G401400 Sobic009G197000 Sobic009G197000 Sobic001G141300--Sobic009G197000 Sobic001G426400 Sobic001G426400 Sobic001G141300--Sobic001G426400 Sobic001G191200 Sobic001G191200 Sobic001G141300--Sobic001G191200 Sobic006G265400 Sobic006G265400 Sobic001G141300--Sobic006G265400 Sobic006G279800 Sobic006G279800 Sobic001G141300--Sobic006G279800 Sobic001G423100 Sobic001G423100 Sobic001G141300--Sobic001G423100 Sobic001G078200 Sobic001G078200 Sobic001G141300--Sobic001G078200 Sobic003G401400--Sobic001G141300 Sobic003G401400--Sobic008G185900 Sobic003G401400--Sobic002G376400 Sobic001G081400 Sobic001G081400 Sobic003G401400--Sobic001G081400 Sobic004G309500 Sobic004G309500 Sobic003G401400--Sobic004G309500 Sobic007G034400 Sobic007G034400 Sobic003G401400--Sobic007G034400 Sobic003G401400--Sobic008G171800 Sobic001G202400 Sobic001G202400 Sobic003G401400--Sobic001G202400 Sobic004G028400 Sobic004G028400 Sobic003G401400--Sobic004G028400 Sobic001G341300--Sobic002G376400 Sobic006G159400 Sobic006G159400 Sobic001G341300--Sobic006G159400 Sobic001G341300--Sobic004G216700 Sobic009G159700 Sobic009G159700 Sobic001G341300--Sobic009G159700 Sobic001G341300--Sobic008G185900 Sobic009G166801 Sobic009G166801 Sobic001G341300--Sobic009G166801 Sobic001G253600 Sobic001G253600 Sobic001G341300--Sobic001G253600 Sobic001G516500 Sobic001G516500 Sobic001G341300--Sobic001G516500 Sobic005G172300 Sobic005G172300 Sobic001G341300--Sobic005G172300 Sobic002G376400--Sobic001G341300 Sobic002G376400--Sobic004G216700 Sobic002G376400--Sobic003G401400 Sobic002G376400--Sobic008G185900 Sobic009G129500 Sobic009G129500 Sobic002G376400--Sobic009G129500 Sobic002G376400--Sobic009G159700 Sobic002G376400--Sobic009G166801 Sobic002G376400--Sobic005G172300 Sobic010G072300 Sobic010G072300 Sobic002G376400--Sobic010G072300 Sobic008G133500--Sobic008G185900 Sobic004G177100 Sobic004G177100 Sobic008G133500--Sobic004G177100 Sobic006G179700 Sobic006G179700 Sobic008G133500--Sobic006G179700 Sobic009G013900 Sobic009G013900 Sobic008G133500--Sobic009G013900 Sobic006G242300 Sobic006G242300 Sobic008G133500--Sobic006G242300 Sobic008G133500--Sobic008G171800 Sobic006G177300 Sobic006G177300 Sobic008G133500--Sobic006G177300 Sobic001G041200 Sobic001G041200 Sobic008G133500--Sobic001G041200 Sobic003G128000 Sobic003G128000 Sobic008G133500--Sobic003G128000 Sobic005G085600 Sobic005G085600 Sobic002G279100--Sobic005G085600 Sobic005G085200 Sobic005G085200 Sobic002G279100--Sobic005G085200 Sobic003G397300 Sobic003G397300 Sobic002G279100--Sobic003G397300 Sobic010G057300 Sobic010G057300 Sobic002G279100--Sobic010G057300 Sobic002G279100--Sobic006G241200 Sobic007G189800 Sobic007G189800 Sobic002G279100--Sobic007G189800 Sobic002G279100--Sobic009G159700 Sobic004G285800 Sobic004G285800 Sobic002G279100--Sobic004G285800 Sobic006G213100 Sobic006G213100 Sobic002G279100--Sobic006G213100 Sobic004G216700--Sobic002G376400 Sobic005G085100 Sobic005G085100 Sobic004G216700--Sobic005G085100 Sobic004G216700--Sobic001G341300 Sobic001G480400 Sobic001G480400 Sobic004G216700--Sobic001G480400 Sobic010G143400 Sobic010G143400 Sobic004G216700--Sobic010G143400 Sobic004G216700--Sobic009G159700 Sobic004G216700--Sobic006G241200 Sobic008G013900 Sobic008G013900 Sobic004G216700--Sobic008G013900 Sobic004G216700--Sobic007G189800 Sobic002G206500 Sobic002G206500 Sobic008G171800--Sobic002G206500 Sobic003G407600 Sobic003G407600 Sobic008G171800--Sobic003G407600 Sobic002G262100 Sobic002G262100 Sobic008G171800--Sobic002G262100 Sobic004G173100 Sobic004G173100 Sobic008G171800--Sobic004G173100 Sobic006G198600 Sobic006G198600 Sobic008G171800--Sobic006G198600 Sobic008G171800--Sobic008G185900 Sobic008G171800--Sobic001G141300 Sobic004G130200 Sobic004G130200 Sobic008G171800--Sobic004G130200 Sobic008G171800--Sobic003G401400 Sobic010G270900 Sobic010G270900 Sobic006G241200--Sobic010G270900 Sobic006G241200--Sobic009G159700 Sobic006G241200--Sobic008G013900 Sobic006G241200--Sobic005G085200 Sobic006G241200--Sobic002G279100 Sobic006G241200--Sobic004G216700 Sobic006G241200--Sobic007G189800 Sobic009G162401 Sobic009G162401 Sobic006G241200--Sobic009G162401 Sobic006G241200--Sobic009G197000
Octagon: transcription factors


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