Gene annotation
Transcriptome id Sobic.002G338300.1
Synonym Sb02g036290
Functional annotation expressed protein
UniProt C5XBJ2
Pfam PF12609
Panther DB PTHR33090
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G28240 : Wound-responsive family protein
RAP-DB (Rice) LOC_Os07g37290.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK15774
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G100800 expressed protein -
2 Sobic.006G269200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@stem-specific protein TSJT1, putative, expressed -
3 Sobic.009G030100 expressed protein -
4 Sobic.009G064000 expressed protein -
5 Sobic.003G013600 expressed protein -
6 Sobic.009G166801 - -
7 Sobic.006G047000 CBS domain containing membrane protein, putative, expressed -
8 Sobic.009G080200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CAPIP1, putative, expressed K14496: abscisic acid receptor PYR/PYL family
9 Sobic.008G185900 RNA recognition motif containing protein, expressed -
10 Sobic.003G299800 RING-H2 finger protein, putative, expressed K19038: E3 ubiquitin-protein ligase ATL41
11 Sobic.001G141300 RNA recognition motif containing protein, expressed -
12 Sobic.001G526900 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
13 Sobic.010G110700 Acyl activating enzyme 5 AAE5 (At)(PubMedID : 27208977)@AMP-binding enzyme, putative, expressed -
14 Sobic.010G030401 - -
15 Sobic.002G421600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed -
16 Sobic.003G418000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leucoanthocyanidin dioxygenase, putative, expressed -
17 Sobic.001G078200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.009G159700 expressed protein -
19 Sobic.007G148200 auxin-repressed protein, putative, expressed -
20 Sobic.004G285800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transmembrane amino acid transporter protein, putative, expressed K14209: SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)


Gene co-expression network
sample Sobic002G338300 Sobic002G338300 Sobic009G100800 Sobic009G100800 Sobic002G338300--Sobic009G100800 Sobic006G269200 Sobic006G269200 Sobic002G338300--Sobic006G269200 Sobic009G030100 Sobic009G030100 Sobic002G338300--Sobic009G030100 Sobic009G064000 Sobic009G064000 Sobic002G338300--Sobic009G064000 Sobic003G013600 Sobic003G013600 Sobic002G338300--Sobic003G013600 Sobic009G166801 Sobic009G166801 Sobic002G338300--Sobic009G166801 Sobic006G047000 Sobic006G047000 Sobic002G338300--Sobic006G047000 Sobic009G080200 Sobic009G080200 Sobic002G338300--Sobic009G080200 Sobic008G185900 Sobic008G185900 Sobic002G338300--Sobic008G185900 Sobic009G100800--Sobic009G064000 Sobic002G254200 Sobic002G254200 Sobic009G100800--Sobic002G254200 Sobic001G530350 Sobic001G530350 Sobic009G100800--Sobic001G530350 Sobic001G225300 Sobic001G225300 Sobic009G100800--Sobic001G225300 Sobic009G100800--Sobic006G269200 Sobic001G225600 Sobic001G225600 Sobic009G100800--Sobic001G225600 Sobic002G421600 Sobic002G421600 Sobic009G100800--Sobic002G421600 Sobic010G030401 Sobic010G030401 Sobic009G100800--Sobic010G030401 Sobic009G100800--Sobic003G013600 Sobic006G269200--Sobic002G254200 Sobic006G269200--Sobic009G030100 Sobic006G269200--Sobic002G421600 Sobic006G269200--Sobic009G064000 Sobic001G225200 Sobic001G225200 Sobic006G269200--Sobic001G225200 Sobic006G269200--Sobic010G030401 Sobic006G269200--Sobic001G225300 Sobic007G177100 Sobic007G177100 Sobic006G269200--Sobic007G177100 Sobic007G126100 Sobic007G126100 Sobic006G269200--Sobic007G126100 Sobic009G030100--Sobic006G269200 Sobic003G293900 Sobic003G293900 Sobic009G030100--Sobic003G293900 Sobic004G157300 Sobic004G157300 Sobic009G030100--Sobic004G157300 Sobic009G030100--Sobic009G166801 Sobic003G418000 Sobic003G418000 Sobic009G030100--Sobic003G418000 Sobic007G002200 Sobic007G002200 Sobic009G030100--Sobic007G002200 Sobic010G110700 Sobic010G110700 Sobic009G030100--Sobic010G110700 Sobic009G030100--Sobic002G338300 Sobic009G030100--Sobic009G064000 Sobic009G064000--Sobic006G269200 Sobic009G064000--Sobic009G100800 Sobic009G064000--Sobic001G225300 Sobic009G064000--Sobic010G030401 Sobic009G064000--Sobic001G225200 Sobic009G064000--Sobic002G254200 Sobic009G064000--Sobic001G530350 Sobic009G064000--Sobic009G030100 Sobic006G154500 Sobic006G154500 Sobic009G064000--Sobic006G154500 Sobic003G123300 Sobic003G123300 Sobic003G013600--Sobic003G123300 Sobic003G013600--Sobic009G080200 Sobic003G085700 Sobic003G085700 Sobic003G013600--Sobic003G085700 Sobic003G013600--Sobic001G225600 Sobic003G013600--Sobic001G530350 Sobic010G267000 Sobic010G267000 Sobic003G013600--Sobic010G267000 Sobic003G296300 Sobic003G296300 Sobic003G013600--Sobic003G296300 Sobic001G293800 Sobic001G293800 Sobic003G013600--Sobic001G293800 Sobic001G225400 Sobic001G225400 Sobic003G013600--Sobic001G225400 Sobic009G159700 Sobic009G159700 Sobic009G166801--Sobic009G159700 Sobic009G166801--Sobic009G030100 Sobic004G285800 Sobic004G285800 Sobic009G166801--Sobic004G285800 Sobic009G166801--Sobic010G110700 Sobic001G341300 Sobic001G341300 Sobic009G166801--Sobic001G341300 Sobic009G166801--Sobic003G293900 Sobic009G166801--Sobic002G338300 Sobic005G085600 Sobic005G085600 Sobic009G166801--Sobic005G085600 Sobic009G166801--Sobic006G269200 Sobic001G234300 Sobic001G234300 Sobic006G047000--Sobic001G234300 Sobic006G047000--Sobic002G421600 Sobic006G047000--Sobic007G177100 Sobic006G047000--Sobic007G126100 Sobic006G047000--Sobic010G030401 Sobic010G250600 Sobic010G250600 Sobic006G047000--Sobic010G250600 Sobic006G159300 Sobic006G159300 Sobic006G047000--Sobic006G159300 Sobic001G321500 Sobic001G321500 Sobic006G047000--Sobic001G321500 Sobic010G194300 Sobic010G194300 Sobic006G047000--Sobic010G194300 Sobic009G080200--Sobic003G013600 Sobic001G285000 Sobic001G285000 Sobic009G080200--Sobic001G285000 Sobic002G117200 Sobic002G117200 Sobic009G080200--Sobic002G117200 Sobic004G275200 Sobic004G275200 Sobic009G080200--Sobic004G275200 Sobic002G123200 Sobic002G123200 Sobic009G080200--Sobic002G123200 Sobic009G156300 Sobic009G156300 Sobic009G080200--Sobic009G156300 Sobic009G080200--Sobic003G123300 Sobic001G078200 Sobic001G078200 Sobic009G080200--Sobic001G078200 Sobic002G194700 Sobic002G194700 Sobic009G080200--Sobic002G194700 Sobic001G141300 Sobic001G141300 Sobic008G185900--Sobic001G141300 Sobic003G401400 Sobic003G401400 Sobic008G185900--Sobic003G401400 Sobic008G185900--Sobic001G341300 Sobic002G376400 Sobic002G376400 Sobic008G185900--Sobic002G376400 Sobic008G133500 Sobic008G133500 Sobic008G185900--Sobic008G133500 Sobic002G279100 Sobic002G279100 Sobic008G185900--Sobic002G279100 Sobic004G216700 Sobic004G216700 Sobic008G185900--Sobic004G216700 Sobic008G171800 Sobic008G171800 Sobic008G185900--Sobic008G171800 Sobic006G241200 Sobic006G241200 Sobic008G185900--Sobic006G241200
Octagon: transcription factors


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