Gene annotation
Transcriptome id Sobic.009G064000.1
Synonym Sb09g005330
Functional annotation expressed protein
UniProt C5Z158
Pfam -
Panther DB PTHR34198 PTHR34198:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G15630 : -
RAP-DB (Rice) LOC_Os05g08420.1 : expressed protein
MaizeGDB (Corn) Zm00025a043043 , Zm00025a043044
Brachypodium KQK02959 , KQK07244 , KQK07245
Barley HORVU1Hr1G025940.2 , HORVU1Hr1G025940.1 , HORVU3Hr1G023750.2 , HORVU3Hr1G023750.3 , HORVU0Hr1G025440.1 , HORVU0Hr1G025440.2 , HORVU3Hr1G023800.1 , HORVU3Hr1G023750.1
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.009G064000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G269200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@stem-specific protein TSJT1, putative, expressed -
2 Sobic.009G100800 expressed protein -
3 Sobic.001G225300 - -
4 Sobic.010G030401 - -
5 Sobic.001G225200 expressed protein -
6 Sobic.002G254200 expressed protein -
7 Sobic.001G530350 - -
8 Sobic.009G030100 expressed protein -
9 Sobic.006G154500 GEM, putative, expressed -
10 Sobic.002G338300 expressed protein -
11 Sobic.002G421600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed -
12 Sobic.003G265200 B3 DNA binding domain containing protein, expressed K09287: RAV-like factor
13 Sobic.006G274700 expressed protein -
14 Sobic.001G225600 expressed protein -
15 Sobic.001G431500 gibberellin receptor GID1L2, putative, expressed -
16 Sobic.003G034400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger/CCCH transcription factor, putative, expressed -
17 Sobic.009G221400 B3 DNA binding domain containing protein, expressed K09287: RAV-like factor
18 Sobic.001G234800 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
19 Sobic.003G406900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
20 Sobic.010G175800 "similar to Glutathione S-transferase GST 19, expressed in drought and oxidative stress"(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic009G064000 Sobic009G064000 Sobic006G269200 Sobic006G269200 Sobic009G064000--Sobic006G269200 Sobic009G100800 Sobic009G100800 Sobic009G064000--Sobic009G100800 Sobic001G225300 Sobic001G225300 Sobic009G064000--Sobic001G225300 Sobic010G030401 Sobic010G030401 Sobic009G064000--Sobic010G030401 Sobic001G225200 Sobic001G225200 Sobic009G064000--Sobic001G225200 Sobic002G254200 Sobic002G254200 Sobic009G064000--Sobic002G254200 Sobic001G530350 Sobic001G530350 Sobic009G064000--Sobic001G530350 Sobic009G030100 Sobic009G030100 Sobic009G064000--Sobic009G030100 Sobic006G154500 Sobic006G154500 Sobic009G064000--Sobic006G154500 Sobic006G269200--Sobic002G254200 Sobic006G269200--Sobic009G030100 Sobic002G421600 Sobic002G421600 Sobic006G269200--Sobic002G421600 Sobic006G269200--Sobic009G064000 Sobic006G269200--Sobic001G225200 Sobic006G269200--Sobic010G030401 Sobic006G269200--Sobic001G225300 Sobic007G177100 Sobic007G177100 Sobic006G269200--Sobic007G177100 Sobic007G126100 Sobic007G126100 Sobic006G269200--Sobic007G126100 Sobic009G100800--Sobic009G064000 Sobic009G100800--Sobic002G254200 Sobic009G100800--Sobic001G530350 Sobic009G100800--Sobic001G225300 Sobic009G100800--Sobic006G269200 Sobic001G225600 Sobic001G225600 Sobic009G100800--Sobic001G225600 Sobic009G100800--Sobic002G421600 Sobic009G100800--Sobic010G030401 Sobic003G013600 Sobic003G013600 Sobic009G100800--Sobic003G013600 Sobic001G225300--Sobic001G225200 Sobic001G225300--Sobic002G254200 Sobic001G225300--Sobic006G154500 Sobic001G225300--Sobic006G269200 Sobic003G406900 Sobic003G406900 Sobic001G225300--Sobic003G406900 Sobic004G161751 Sobic004G161751 Sobic001G225300--Sobic004G161751 Sobic010G175800 Sobic010G175800 Sobic001G225300--Sobic010G175800 Sobic001G225300--Sobic001G225600 Sobic001G225300--Sobic009G064000 Sobic010G030401--Sobic007G177100 Sobic009G159200 Sobic009G159200 Sobic010G030401--Sobic009G159200 Sobic003G360000 Sobic003G360000 Sobic010G030401--Sobic003G360000 Sobic010G030401--Sobic002G254200 Sobic010G030401--Sobic006G269200 Sobic009G075900 Sobic009G075900 Sobic010G030401--Sobic009G075900 Sobic009G230100 Sobic009G230100 Sobic010G030401--Sobic009G230100 Sobic010G030401--Sobic006G154500 Sobic009G221400 Sobic009G221400 Sobic010G030401--Sobic009G221400 Sobic001G225200--Sobic001G225300 Sobic001G225200--Sobic002G254200 Sobic006G157500 Sobic006G157500 Sobic001G225200--Sobic006G157500 Sobic006G191600 Sobic006G191600 Sobic001G225200--Sobic006G191600 Sobic001G225200--Sobic003G406900 Sobic001G225200--Sobic006G269200 Sobic001G225200--Sobic007G177100 Sobic001G225200--Sobic006G154500 Sobic003G265200 Sobic003G265200 Sobic001G225200--Sobic003G265200 Sobic002G254200--Sobic001G225200 Sobic002G254200--Sobic001G225300 Sobic002G254200--Sobic006G269200 Sobic002G254200--Sobic006G154500 Sobic002G254200--Sobic007G177100 Sobic002G254200--Sobic006G191600 Sobic002G254200--Sobic009G159200 Sobic002G254200--Sobic006G157500 Sobic002G254200--Sobic007G126100 Sobic006G097800 Sobic006G097800 Sobic001G530350--Sobic006G097800 Sobic001G526900 Sobic001G526900 Sobic001G530350--Sobic001G526900 Sobic003G296300 Sobic003G296300 Sobic001G530350--Sobic003G296300 Sobic001G093900 Sobic001G093900 Sobic001G530350--Sobic001G093900 Sobic001G345400 Sobic001G345400 Sobic001G530350--Sobic001G345400 Sobic001G530350--Sobic009G100800 Sobic001G530350--Sobic001G225600 Sobic001G530350--Sobic003G013600 Sobic006G246100 Sobic006G246100 Sobic001G530350--Sobic006G246100 Sobic009G030100--Sobic006G269200 Sobic003G293900 Sobic003G293900 Sobic009G030100--Sobic003G293900 Sobic004G157300 Sobic004G157300 Sobic009G030100--Sobic004G157300 Sobic009G166801 Sobic009G166801 Sobic009G030100--Sobic009G166801 Sobic003G418000 Sobic003G418000 Sobic009G030100--Sobic003G418000 Sobic007G002200 Sobic007G002200 Sobic009G030100--Sobic007G002200 Sobic010G110700 Sobic010G110700 Sobic009G030100--Sobic010G110700 Sobic002G338300 Sobic002G338300 Sobic009G030100--Sobic002G338300 Sobic009G030100--Sobic009G064000 Sobic006G154400 Sobic006G154400 Sobic006G154500--Sobic006G154400 Sobic009G145500 Sobic009G145500 Sobic006G154500--Sobic009G145500 Sobic003G303100 Sobic003G303100 Sobic006G154500--Sobic003G303100 Sobic006G154500--Sobic004G161751 Sobic003G043600 Sobic003G043600 Sobic006G154500--Sobic003G043600 Sobic001G401100 Sobic001G401100 Sobic006G154500--Sobic001G401100 Sobic006G154500--Sobic010G175800 Sobic002G338500 Sobic002G338500 Sobic006G154500--Sobic002G338500 Sobic004G203700 Sobic004G203700 Sobic006G154500--Sobic004G203700
Octagon: transcription factors


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