Gene annotation
Transcriptome id Sobic.006G274700.1
Synonym Sb06g033610
Functional annotation expressed protein
UniProt C5YAZ9
Pfam -
Panther DB PTHR36351 PTHR36351:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g58890.1 : expressed protein
MaizeGDB (Corn) Zm00025a009228 , Zm00025a057444 , Zm00025a057436
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G274700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G221400 B3 DNA binding domain containing protein, expressed K09287: RAV-like factor
2 Sobic.002G353900 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
3 Sobic.003G043600 BAHD acyl transferase(PubMedID : 28944535)@transferase family protein, putative, expressed -
4 Sobic.003G303100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
5 Sobic.002G192000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AN1-like zinc finger domain containing protein, expressed -
6 Sobic.002G338500 sugar transporter 1(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
7 Sobic.003G382600 ARGOS, putative, expressed -
8 Sobic.002G055700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
9 Sobic.003G254900 no apical meristem protein, putative, expressed -
10 Sobic.009G145500 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.001G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.006G154500 GEM, putative, expressed -
13 Sobic.005G029200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calmodulin-like protein 1, putative, expressed K13448: calcium-binding protein CML
14 Sobic.004G189400 expressed protein -
15 Sobic.001G231400 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
16 Sobic.006G158600 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
17 Sobic.001G481100 DUF581 domain containing protein, expressed -
18 Sobic.001G247300 "Ca ATPase, IIB type"(PubMedID : 22196357)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
19 Sobic.001G318700 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.004G245100 immediate-early fungal elicitor protein CMPG1, putative, expressed -


Gene co-expression network
sample Sobic006G274700 Sobic006G274700 Sobic009G221400 Sobic009G221400 Sobic006G274700--Sobic009G221400 Sobic002G353900 Sobic002G353900 Sobic006G274700--Sobic002G353900 Sobic003G043600 Sobic003G043600 Sobic006G274700--Sobic003G043600 Sobic003G303100 Sobic003G303100 Sobic006G274700--Sobic003G303100 Sobic002G192000 Sobic002G192000 Sobic006G274700--Sobic002G192000 Sobic002G338500 Sobic002G338500 Sobic006G274700--Sobic002G338500 Sobic003G382600 Sobic003G382600 Sobic006G274700--Sobic003G382600 Sobic002G055700 Sobic002G055700 Sobic006G274700--Sobic002G055700 Sobic003G254900 Sobic003G254900 Sobic006G274700--Sobic003G254900 Sobic009G221400--Sobic002G353900 Sobic003G041600 Sobic003G041600 Sobic009G221400--Sobic003G041600 Sobic006G158600 Sobic006G158600 Sobic009G221400--Sobic006G158600 Sobic008G044300 Sobic008G044300 Sobic009G221400--Sobic008G044300 Sobic002G336600 Sobic002G336600 Sobic009G221400--Sobic002G336600 Sobic001G477600 Sobic001G477600 Sobic009G221400--Sobic001G477600 Sobic004G208700 Sobic004G208700 Sobic009G221400--Sobic004G208700 Sobic009G070400 Sobic009G070400 Sobic009G221400--Sobic009G070400 Sobic009G221400--Sobic002G192000 Sobic002G353900--Sobic002G055700 Sobic002G353900--Sobic003G382600 Sobic001G367600 Sobic001G367600 Sobic002G353900--Sobic001G367600 Sobic002G302500 Sobic002G302500 Sobic002G353900--Sobic002G302500 Sobic002G353900--Sobic002G192000 Sobic002G353900--Sobic009G221400 Sobic009G139400 Sobic009G139400 Sobic002G353900--Sobic009G139400 Sobic002G353900--Sobic006G158600 Sobic009G234100 Sobic009G234100 Sobic002G353900--Sobic009G234100 Sobic003G043600--Sobic002G338500 Sobic009G145500 Sobic009G145500 Sobic003G043600--Sobic009G145500 Sobic003G268600 Sobic003G268600 Sobic003G043600--Sobic003G268600 Sobic006G075400 Sobic006G075400 Sobic003G043600--Sobic006G075400 Sobic003G442100 Sobic003G442100 Sobic003G043600--Sobic003G442100 Sobic001G310600 Sobic001G310600 Sobic003G043600--Sobic001G310600 Sobic009G184000 Sobic009G184000 Sobic003G043600--Sobic009G184000 Sobic009G145700 Sobic009G145700 Sobic003G043600--Sobic009G145700 Sobic001G318700 Sobic001G318700 Sobic003G043600--Sobic001G318700 Sobic003G303100--Sobic002G055700 Sobic003G303100--Sobic001G318700 Sobic004G189400 Sobic004G189400 Sobic003G303100--Sobic004G189400 Sobic003G303100--Sobic003G382600 Sobic004G237800 Sobic004G237800 Sobic003G303100--Sobic004G237800 Sobic003G426400 Sobic003G426400 Sobic003G303100--Sobic003G426400 Sobic004G148200 Sobic004G148200 Sobic003G303100--Sobic004G148200 Sobic005G029200 Sobic005G029200 Sobic003G303100--Sobic005G029200 Sobic005G063100 Sobic005G063100 Sobic003G303100--Sobic005G063100 Sobic001G018300 Sobic001G018300 Sobic002G192000--Sobic001G018300 Sobic002G192000--Sobic001G367600 Sobic001G231400 Sobic001G231400 Sobic002G192000--Sobic001G231400 Sobic004G243100 Sobic004G243100 Sobic002G192000--Sobic004G243100 Sobic002G192000--Sobic006G158600 Sobic002G192000--Sobic001G318700 Sobic001G038900 Sobic001G038900 Sobic002G192000--Sobic001G038900 Sobic002G140400 Sobic002G140400 Sobic002G192000--Sobic002G140400 Sobic001G423800 Sobic001G423800 Sobic002G192000--Sobic001G423800 Sobic002G338500--Sobic003G043600 Sobic002G338500--Sobic003G382600 Sobic002G338500--Sobic002G055700 Sobic010G156500 Sobic010G156500 Sobic002G338500--Sobic010G156500 Sobic003G364300 Sobic003G364300 Sobic002G338500--Sobic003G364300 Sobic002G338500--Sobic009G145500 Sobic002G338500--Sobic009G145700 Sobic002G338500--Sobic002G353900 Sobic005G196800 Sobic005G196800 Sobic002G338500--Sobic005G196800 Sobic003G382600--Sobic002G055700 Sobic003G382600--Sobic004G189400 Sobic003G382600--Sobic002G338500 Sobic003G382600--Sobic002G353900 Sobic003G382600--Sobic003G303100 Sobic003G382600--Sobic004G237800 Sobic005G091500 Sobic005G091500 Sobic003G382600--Sobic005G091500 Sobic008G050600 Sobic008G050600 Sobic003G382600--Sobic008G050600 Sobic003G382600--Sobic003G043600 Sobic002G055700--Sobic003G303100 Sobic002G055700--Sobic003G382600 Sobic002G055700--Sobic004G237800 Sobic002G055700--Sobic003G426400 Sobic002G055700--Sobic002G353900 Sobic002G055700--Sobic004G148200 Sobic002G055700--Sobic004G189400 Sobic002G055700--Sobic002G338500 Sobic002G055700--Sobic001G367600 Sobic001G192600 Sobic001G192600 Sobic003G254900--Sobic001G192600 Sobic003G254900--Sobic009G221400 Sobic003G254900--Sobic006G274700 Sobic003G254900--Sobic002G192000 Sobic003G254900--Sobic006G158600 Sobic007G149300 Sobic007G149300 Sobic003G254900--Sobic007G149300 Sobic001G449700 Sobic001G449700 Sobic003G254900--Sobic001G449700 Sobic001G481100 Sobic001G481100 Sobic003G254900--Sobic001G481100 Sobic003G037500 Sobic003G037500 Sobic003G254900--Sobic003G037500
Octagon: transcription factors


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