Gene annotation
Transcriptome id Sobic.003G254900.1
Synonym anac047, NAC047
Functional annotation no apical meristem protein, putative, expressed
UniProt C5XGN3
Pfam PF02365
Panther DB PTHR31989 PTHR31989:SF52
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT3G04070 : NAC domain containing protein 47
RAP-DB (Rice) LOC_Os01g48446.1 : no apical meristem protein, putative, expressed
MaizeGDB (Corn) Zm00025a028066 , Zm00025a038822
Brachypodium -
Barley HORVU3Hr1G088800.1 , HORVU3Hr1G088800.2 , HORVU3Hr1G062150.3 , HORVU3Hr1G062150.2 , HORVU3Hr1G062150.1 , HORVU3Hr1G047900.1
Wheat -
Populus -


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cDNA sequences
Sobic.003G254900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G192600 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
2 Sobic.009G221400 B3 DNA binding domain containing protein, expressed K09287: RAV-like factor
3 Sobic.006G274700 expressed protein -
4 Sobic.002G192000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AN1-like zinc finger domain containing protein, expressed -
5 Sobic.006G158600 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
6 Sobic.007G149300 expressed protein -
7 Sobic.001G449700 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
8 Sobic.001G481100 DUF581 domain containing protein, expressed -
9 Sobic.003G037500 WRKY107, expressed -
10 Sobic.003G110200 NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
11 Sobic.002G353900 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
12 Sobic.002G245800 AN1-like zinc finger domain containing protein, expressed -
13 Sobic.001G055600 prenylated rab acceptor, putative, expressed -
14 Sobic.007G123300 C1-like domain containing protein, expressed -
15 Sobic.003G202200 uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
16 Sobic.003G364600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
17 Sobic.002G333400 KI domain interacting kinase 1, putative, expressed -
18 Sobic.009G247900 similar to Putative late embryogenesis abundant protein(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@late embryogenesis abundant protein, putative, expressed -
19 Sobic.001G231400 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
20 Sobic.008G044300 U-box domain-containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G254900 Sobic003G254900 Sobic001G192600 Sobic001G192600 Sobic003G254900--Sobic001G192600 Sobic009G221400 Sobic009G221400 Sobic003G254900--Sobic009G221400 Sobic006G274700 Sobic006G274700 Sobic003G254900--Sobic006G274700 Sobic002G192000 Sobic002G192000 Sobic003G254900--Sobic002G192000 Sobic006G158600 Sobic006G158600 Sobic003G254900--Sobic006G158600 Sobic007G149300 Sobic007G149300 Sobic003G254900--Sobic007G149300 Sobic001G449700 Sobic001G449700 Sobic003G254900--Sobic001G449700 Sobic001G481100 Sobic001G481100 Sobic003G254900--Sobic001G481100 Sobic003G037500 Sobic003G037500 Sobic003G254900--Sobic003G037500 Sobic001G192600--Sobic002G192000 Sobic001G367600 Sobic001G367600 Sobic001G192600--Sobic001G367600 Sobic001G038900 Sobic001G038900 Sobic001G192600--Sobic001G038900 Sobic001G192600--Sobic006G158600 Sobic001G423800 Sobic001G423800 Sobic001G192600--Sobic001G423800 Sobic001G055600 Sobic001G055600 Sobic001G192600--Sobic001G055600 Sobic001G192600--Sobic001G481100 Sobic001G192600--Sobic009G221400 Sobic002G353900 Sobic002G353900 Sobic001G192600--Sobic002G353900 Sobic009G221400--Sobic002G353900 Sobic003G041600 Sobic003G041600 Sobic009G221400--Sobic003G041600 Sobic009G221400--Sobic006G158600 Sobic008G044300 Sobic008G044300 Sobic009G221400--Sobic008G044300 Sobic002G336600 Sobic002G336600 Sobic009G221400--Sobic002G336600 Sobic001G477600 Sobic001G477600 Sobic009G221400--Sobic001G477600 Sobic004G208700 Sobic004G208700 Sobic009G221400--Sobic004G208700 Sobic009G070400 Sobic009G070400 Sobic009G221400--Sobic009G070400 Sobic009G221400--Sobic002G192000 Sobic006G274700--Sobic009G221400 Sobic006G274700--Sobic002G353900 Sobic003G043600 Sobic003G043600 Sobic006G274700--Sobic003G043600 Sobic003G303100 Sobic003G303100 Sobic006G274700--Sobic003G303100 Sobic006G274700--Sobic002G192000 Sobic002G338500 Sobic002G338500 Sobic006G274700--Sobic002G338500 Sobic003G382600 Sobic003G382600 Sobic006G274700--Sobic003G382600 Sobic002G055700 Sobic002G055700 Sobic006G274700--Sobic002G055700 Sobic006G274700--Sobic003G254900 Sobic001G018300 Sobic001G018300 Sobic002G192000--Sobic001G018300 Sobic002G192000--Sobic001G367600 Sobic001G231400 Sobic001G231400 Sobic002G192000--Sobic001G231400 Sobic004G243100 Sobic004G243100 Sobic002G192000--Sobic004G243100 Sobic002G192000--Sobic006G158600 Sobic001G318700 Sobic001G318700 Sobic002G192000--Sobic001G318700 Sobic002G192000--Sobic001G038900 Sobic002G140400 Sobic002G140400 Sobic002G192000--Sobic002G140400 Sobic002G192000--Sobic001G423800 Sobic008G136400 Sobic008G136400 Sobic006G158600--Sobic008G136400 Sobic006G158600--Sobic002G192000 Sobic006G158600--Sobic002G140400 Sobic002G333400 Sobic002G333400 Sobic006G158600--Sobic002G333400 Sobic006G056400 Sobic006G056400 Sobic006G158600--Sobic006G056400 Sobic006G158600--Sobic001G038900 Sobic006G158600--Sobic001G423800 Sobic006G158600--Sobic002G336600 Sobic006G158600--Sobic004G243100 Sobic001G383700 Sobic001G383700 Sobic007G149300--Sobic001G383700 Sobic007G149300--Sobic001G449700 Sobic003G202200 Sobic003G202200 Sobic007G149300--Sobic003G202200 Sobic010G267600 Sobic010G267600 Sobic007G149300--Sobic010G267600 Sobic009G247900 Sobic009G247900 Sobic007G149300--Sobic009G247900 Sobic004G191400 Sobic004G191400 Sobic007G149300--Sobic004G191400 Sobic003G110200 Sobic003G110200 Sobic007G149300--Sobic003G110200 Sobic007G149300--Sobic001G481100 Sobic009G122400 Sobic009G122400 Sobic007G149300--Sobic009G122400 Sobic001G449700--Sobic001G383700 Sobic001G449700--Sobic003G202200 Sobic001G449700--Sobic003G110200 Sobic001G449700--Sobic007G149300 Sobic003G021500 Sobic003G021500 Sobic001G449700--Sobic003G021500 Sobic009G036000 Sobic009G036000 Sobic001G449700--Sobic009G036000 Sobic001G449700--Sobic002G333400 Sobic001G259700 Sobic001G259700 Sobic001G449700--Sobic001G259700 Sobic005G186100 Sobic005G186100 Sobic001G449700--Sobic005G186100 Sobic003G228900 Sobic003G228900 Sobic001G481100--Sobic003G228900 Sobic006G075400 Sobic006G075400 Sobic001G481100--Sobic006G075400 Sobic001G481100--Sobic001G318700 Sobic007G074000 Sobic007G074000 Sobic001G481100--Sobic007G074000 Sobic001G256700 Sobic001G256700 Sobic001G481100--Sobic001G256700 Sobic001G481100--Sobic003G202200 Sobic001G079300 Sobic001G079300 Sobic001G481100--Sobic001G079300 Sobic004G301000 Sobic004G301000 Sobic001G481100--Sobic004G301000 Sobic002G251000 Sobic002G251000 Sobic001G481100--Sobic002G251000 Sobic003G285500 Sobic003G285500 Sobic003G037500--Sobic003G285500 Sobic003G192100 Sobic003G192100 Sobic003G037500--Sobic003G192100 Sobic003G037500--Sobic001G367600 Sobic001G231700 Sobic001G231700 Sobic003G037500--Sobic001G231700 Sobic004G245100 Sobic004G245100 Sobic003G037500--Sobic004G245100 Sobic003G037500--Sobic002G353900 Sobic003G228200 Sobic003G228200 Sobic003G037500--Sobic003G228200 Sobic007G155000 Sobic007G155000 Sobic003G037500--Sobic007G155000 Sobic001G304100 Sobic001G304100 Sobic003G037500--Sobic001G304100
Octagon: transcription factors


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