Gene annotation
Transcriptome id Sobic.003G034400.1
Synonym Sb03g003110
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
zinc finger/CCCH transcription factor, putative, expressed
UniProt A0A1B6Q149
Pfam PF00642
Panther DB PTHR14493 PTHR14493:SF41
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G29190 : Zinc finger C-x8-C-x5-C-x3-H type family protein
RAP-DB (Rice) LOC_Os01g09620.2 : zinc finger/CCCH transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a037535 , Zm00025a040709 , Zm00025a038174 , Zm00025a023044 , Zm00025a035799 , Zm00025a043179
Brachypodium KQK07129 , KQK03130
Barley HORVU1Hr1G014730.1 , HORVU1Hr1G014730.2 , HORVU1Hr1G014730.3 , HORVU1Hr1G014730.4 , HORVU1Hr1G014730.5 , HORVU1Hr1G014730.6 , HORVU3Hr1G019510.1
Wheat -
Populus -


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cDNA sequences
Sobic.003G034400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G421600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed -
2 Sobic.003G123300 zinc finger, C3HC4 type domain containing protein, expressed K16282: E3 ubiquitin-protein ligase RHA2
3 Sobic.006G269200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@stem-specific protein TSJT1, putative, expressed -
4 Sobic.009G100800 expressed protein -
5 Sobic.006G047000 CBS domain containing membrane protein, putative, expressed -
6 Sobic.001G078200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.009G064000 expressed protein -
8 Sobic.005G085600 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
9 Sobic.003G293900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@plant-specific domain TIGR01615 family protein, expressed -
10 Sobic.003G013600 expressed protein -
11 Sobic.001G032100 BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
12 Sobic.001G225600 expressed protein -
13 Sobic.002G338300 expressed protein -
14 Sobic.001G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATP-dependent protease, putative, expressed -
15 Sobic.007G158200 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed -
16 Sobic.003G400200 plant-specific domain TIGR01615 family protein, expressed -
17 Sobic.006G241600 expressed protein -
18 Sobic.008G185900 RNA recognition motif containing protein, expressed -
19 Sobic.010G030401 - -
20 Sobic.004G309000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@alpha-amylase precursor, putative, expressed K01176: AMY, amyA, alpha-amylase


Gene co-expression network
sample Sobic003G034400 Sobic003G034400 Sobic002G421600 Sobic002G421600 Sobic003G034400--Sobic002G421600 Sobic003G123300 Sobic003G123300 Sobic003G034400--Sobic003G123300 Sobic006G269200 Sobic006G269200 Sobic003G034400--Sobic006G269200 Sobic009G100800 Sobic009G100800 Sobic003G034400--Sobic009G100800 Sobic006G047000 Sobic006G047000 Sobic003G034400--Sobic006G047000 Sobic001G078200 Sobic001G078200 Sobic003G034400--Sobic001G078200 Sobic009G064000 Sobic009G064000 Sobic003G034400--Sobic009G064000 Sobic005G085600 Sobic005G085600 Sobic003G034400--Sobic005G085600 Sobic003G293900 Sobic003G293900 Sobic003G034400--Sobic003G293900 Sobic007G126100 Sobic007G126100 Sobic002G421600--Sobic007G126100 Sobic002G421600--Sobic006G269200 Sobic007G177100 Sobic007G177100 Sobic002G421600--Sobic007G177100 Sobic002G254200 Sobic002G254200 Sobic002G421600--Sobic002G254200 Sobic002G421600--Sobic003G034400 Sobic002G421600--Sobic003G293900 Sobic001G225200 Sobic001G225200 Sobic002G421600--Sobic001G225200 Sobic002G421600--Sobic006G047000 Sobic006G241600 Sobic006G241600 Sobic002G421600--Sobic006G241600 Sobic003G013600 Sobic003G013600 Sobic003G123300--Sobic003G013600 Sobic001G465100 Sobic001G465100 Sobic003G123300--Sobic001G465100 Sobic006G051100 Sobic006G051100 Sobic003G123300--Sobic006G051100 Sobic001G225600 Sobic001G225600 Sobic003G123300--Sobic001G225600 Sobic003G123300--Sobic002G421600 Sobic006G241350 Sobic006G241350 Sobic003G123300--Sobic006G241350 Sobic002G367700 Sobic002G367700 Sobic003G123300--Sobic002G367700 Sobic001G530350 Sobic001G530350 Sobic003G123300--Sobic001G530350 Sobic010G267000 Sobic010G267000 Sobic003G123300--Sobic010G267000 Sobic006G269200--Sobic002G254200 Sobic009G030100 Sobic009G030100 Sobic006G269200--Sobic009G030100 Sobic006G269200--Sobic002G421600 Sobic006G269200--Sobic009G064000 Sobic006G269200--Sobic001G225200 Sobic010G030401 Sobic010G030401 Sobic006G269200--Sobic010G030401 Sobic001G225300 Sobic001G225300 Sobic006G269200--Sobic001G225300 Sobic006G269200--Sobic007G177100 Sobic006G269200--Sobic007G126100 Sobic009G100800--Sobic009G064000 Sobic009G100800--Sobic002G254200 Sobic009G100800--Sobic001G530350 Sobic009G100800--Sobic001G225300 Sobic009G100800--Sobic006G269200 Sobic009G100800--Sobic001G225600 Sobic009G100800--Sobic002G421600 Sobic009G100800--Sobic010G030401 Sobic009G100800--Sobic003G013600 Sobic001G234300 Sobic001G234300 Sobic006G047000--Sobic001G234300 Sobic006G047000--Sobic002G421600 Sobic006G047000--Sobic007G177100 Sobic006G047000--Sobic007G126100 Sobic006G047000--Sobic010G030401 Sobic010G250600 Sobic010G250600 Sobic006G047000--Sobic010G250600 Sobic006G159300 Sobic006G159300 Sobic006G047000--Sobic006G159300 Sobic001G321500 Sobic001G321500 Sobic006G047000--Sobic001G321500 Sobic010G194300 Sobic010G194300 Sobic006G047000--Sobic010G194300 Sobic001G191200 Sobic001G191200 Sobic001G078200--Sobic001G191200 Sobic005G085200 Sobic005G085200 Sobic001G078200--Sobic005G085200 Sobic010G057300 Sobic010G057300 Sobic001G078200--Sobic010G057300 Sobic004G285800 Sobic004G285800 Sobic001G078200--Sobic004G285800 Sobic001G078200--Sobic005G085600 Sobic001G423100 Sobic001G423100 Sobic001G078200--Sobic001G423100 Sobic003G406700 Sobic003G406700 Sobic001G078200--Sobic003G406700 Sobic009G159700 Sobic009G159700 Sobic001G078200--Sobic009G159700 Sobic009G213400 Sobic009G213400 Sobic001G078200--Sobic009G213400 Sobic009G064000--Sobic006G269200 Sobic009G064000--Sobic009G100800 Sobic009G064000--Sobic001G225300 Sobic009G064000--Sobic010G030401 Sobic009G064000--Sobic001G225200 Sobic009G064000--Sobic002G254200 Sobic009G064000--Sobic001G530350 Sobic009G064000--Sobic009G030100 Sobic006G154500 Sobic006G154500 Sobic009G064000--Sobic006G154500 Sobic005G085600--Sobic005G085200 Sobic007G189800 Sobic007G189800 Sobic005G085600--Sobic007G189800 Sobic001G032100 Sobic001G032100 Sobic005G085600--Sobic001G032100 Sobic009G180200 Sobic009G180200 Sobic005G085600--Sobic009G180200 Sobic001G363100 Sobic001G363100 Sobic005G085600--Sobic001G363100 Sobic005G085600--Sobic009G159700 Sobic004G199600 Sobic004G199600 Sobic005G085600--Sobic004G199600 Sobic009G078500 Sobic009G078500 Sobic005G085600--Sobic009G078500 Sobic005G085600--Sobic010G057300 Sobic003G296600 Sobic003G296600 Sobic003G293900--Sobic003G296600 Sobic003G293900--Sobic009G030100 Sobic003G293900--Sobic001G032100 Sobic006G194150 Sobic006G194150 Sobic003G293900--Sobic006G194150 Sobic003G293900--Sobic002G421600 Sobic001G247400 Sobic001G247400 Sobic003G293900--Sobic001G247400 Sobic002G330700 Sobic002G330700 Sobic003G293900--Sobic002G330700 Sobic001G311000 Sobic001G311000 Sobic003G293900--Sobic001G311000 Sobic003G293900--Sobic007G126100
Octagon: transcription factors


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