Gene annotation
Transcriptome id Sobic.003G123300.2
Synonym RHA2A
Functional annotation zinc finger, C3HC4 type domain containing protein, expressed
UniProt A0A1W0VX07
Pfam PF13639
Panther DB PTHR14155 PTHR14155:SF175
NCBI CDD -
KEGG Orthology K16282; E3 ubiquitin-protein ligase RHA2
Gene Ontology GO:0008270; zinc ion binding GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT2G01150 : RING-H2 finger protein 2B
RAP-DB (Rice) LOC_Os01g16120.1 : zinc finger, C3HC4 type domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G123300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G013600 expressed protein -
2 Sobic.001G465100 hydrolase, alpha/beta fold family domain containing protein, expressed -
3 Sobic.006G051100 expressed protein -
4 Sobic.001G225600 expressed protein -
5 Sobic.002G421600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed -
6 Sobic.006G241350 - -
7 Sobic.002G367700 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
8 Sobic.001G530350 - -
9 Sobic.010G267000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
10 Sobic.004G325900 trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
11 Sobic.003G320600 membrane protein, putative, expressed -
12 Sobic.003G391100 helix-loop-helix DNA-binding domain containing protein, expressed -
13 Sobic.003G034400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger/CCCH transcription factor, putative, expressed -
14 Sobic.004G110400 RING-H2 finger protein, putative, expressed -
15 Sobic.001G078900 MYB(PubMedID : 28944535)@MYB family transcription factor, putative, expressed -
16 Sobic.002G376000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ring-H2 zinc finger protein, putative, expressed -
17 Sobic.010G157500 zinc finger protein, putative, expressed -
18 Sobic.001G225400 expressed protein -
19 Sobic.009G080200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CAPIP1, putative, expressed K14496: abscisic acid receptor PYR/PYL family
20 Sobic.001G093900 stem-specific protein TSJT1, putative, expressed -


Gene co-expression network
sample Sobic003G123300 Sobic003G123300 Sobic003G013600 Sobic003G013600 Sobic003G123300--Sobic003G013600 Sobic001G465100 Sobic001G465100 Sobic003G123300--Sobic001G465100 Sobic006G051100 Sobic006G051100 Sobic003G123300--Sobic006G051100 Sobic001G225600 Sobic001G225600 Sobic003G123300--Sobic001G225600 Sobic002G421600 Sobic002G421600 Sobic003G123300--Sobic002G421600 Sobic006G241350 Sobic006G241350 Sobic003G123300--Sobic006G241350 Sobic002G367700 Sobic002G367700 Sobic003G123300--Sobic002G367700 Sobic001G530350 Sobic001G530350 Sobic003G123300--Sobic001G530350 Sobic010G267000 Sobic010G267000 Sobic003G123300--Sobic010G267000 Sobic003G013600--Sobic003G123300 Sobic009G080200 Sobic009G080200 Sobic003G013600--Sobic009G080200 Sobic003G085700 Sobic003G085700 Sobic003G013600--Sobic003G085700 Sobic003G013600--Sobic001G225600 Sobic003G013600--Sobic001G530350 Sobic003G013600--Sobic010G267000 Sobic003G296300 Sobic003G296300 Sobic003G013600--Sobic003G296300 Sobic001G293800 Sobic001G293800 Sobic003G013600--Sobic001G293800 Sobic001G225400 Sobic001G225400 Sobic003G013600--Sobic001G225400 Sobic008G042500 Sobic008G042500 Sobic001G465100--Sobic008G042500 Sobic003G391100 Sobic003G391100 Sobic001G465100--Sobic003G391100 Sobic001G465100--Sobic003G123300 Sobic001G078900 Sobic001G078900 Sobic001G465100--Sobic001G078900 Sobic004G325900 Sobic004G325900 Sobic001G465100--Sobic004G325900 Sobic002G376700 Sobic002G376700 Sobic001G465100--Sobic002G376700 Sobic001G465100--Sobic006G241350 Sobic004G096300 Sobic004G096300 Sobic001G465100--Sobic004G096300 Sobic001G053900 Sobic001G053900 Sobic001G465100--Sobic001G053900 Sobic003G320600 Sobic003G320600 Sobic006G051100--Sobic003G320600 Sobic006G051100--Sobic003G123300 Sobic001G093600 Sobic001G093600 Sobic006G051100--Sobic001G093600 Sobic003G107300 Sobic003G107300 Sobic006G051100--Sobic003G107300 Sobic006G279700 Sobic006G279700 Sobic006G051100--Sobic006G279700 Sobic003G178700 Sobic003G178700 Sobic006G051100--Sobic003G178700 Sobic006G051100--Sobic002G367700 Sobic001G225500 Sobic001G225500 Sobic006G051100--Sobic001G225500 Sobic001G191200 Sobic001G191200 Sobic006G051100--Sobic001G191200 Sobic001G225300 Sobic001G225300 Sobic001G225600--Sobic001G225300 Sobic001G225600--Sobic001G530350 Sobic001G225600--Sobic003G013600 Sobic009G100800 Sobic009G100800 Sobic001G225600--Sobic009G100800 Sobic001G225600--Sobic003G123300 Sobic001G225200 Sobic001G225200 Sobic001G225600--Sobic001G225200 Sobic003G299800 Sobic003G299800 Sobic001G225600--Sobic003G299800 Sobic003G400200 Sobic003G400200 Sobic001G225600--Sobic003G400200 Sobic001G225600--Sobic002G421600 Sobic007G126100 Sobic007G126100 Sobic002G421600--Sobic007G126100 Sobic006G269200 Sobic006G269200 Sobic002G421600--Sobic006G269200 Sobic007G177100 Sobic007G177100 Sobic002G421600--Sobic007G177100 Sobic002G254200 Sobic002G254200 Sobic002G421600--Sobic002G254200 Sobic003G034400 Sobic003G034400 Sobic002G421600--Sobic003G034400 Sobic003G293900 Sobic003G293900 Sobic002G421600--Sobic003G293900 Sobic002G421600--Sobic001G225200 Sobic006G047000 Sobic006G047000 Sobic002G421600--Sobic006G047000 Sobic006G241600 Sobic006G241600 Sobic002G421600--Sobic006G241600 Sobic006G241400 Sobic006G241400 Sobic006G241350--Sobic006G241400 Sobic004G279700 Sobic004G279700 Sobic006G241350--Sobic004G279700 Sobic006G241350--Sobic004G325900 Sobic006G241350--Sobic006G241600 Sobic007G028700 Sobic007G028700 Sobic006G241350--Sobic007G028700 Sobic006G241350--Sobic002G367700 Sobic006G241350--Sobic001G078900 Sobic006G241350--Sobic003G123300 Sobic006G241350--Sobic001G465100 Sobic002G367700--Sobic006G241350 Sobic002G367700--Sobic003G123300 Sobic002G367700--Sobic001G078900 Sobic002G367700--Sobic006G051100 Sobic002G367700--Sobic001G465100 Sobic002G367700--Sobic004G325900 Sobic002G016300 Sobic002G016300 Sobic002G367700--Sobic002G016300 Sobic002G367700--Sobic007G028700 Sobic002G367700--Sobic006G241400 Sobic006G097800 Sobic006G097800 Sobic001G530350--Sobic006G097800 Sobic001G526900 Sobic001G526900 Sobic001G530350--Sobic001G526900 Sobic001G530350--Sobic003G296300 Sobic001G093900 Sobic001G093900 Sobic001G530350--Sobic001G093900 Sobic001G345400 Sobic001G345400 Sobic001G530350--Sobic001G345400 Sobic001G530350--Sobic009G100800 Sobic001G530350--Sobic001G225600 Sobic001G530350--Sobic003G013600 Sobic006G246100 Sobic006G246100 Sobic001G530350--Sobic006G246100 Sobic010G267000--Sobic003G013600 Sobic010G267000--Sobic003G123300 Sobic010G267000--Sobic001G293800 Sobic010G267000--Sobic004G096300 Sobic010G267000--Sobic003G085700 Sobic010G276000 Sobic010G276000 Sobic010G267000--Sobic010G276000 Sobic010G267000--Sobic001G465100 Sobic001G182600 Sobic001G182600 Sobic010G267000--Sobic001G182600 Sobic010G246600 Sobic010G246600 Sobic010G267000--Sobic010G246600
Octagon: transcription factors


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