Gene annotation
Transcriptome id Sobic.001G465100.1
Synonym Sb01g043630
Functional annotation hydrolase, alpha/beta fold family domain containing protein, expressed
UniProt C5WTS6
Pfam PF12697
Panther DB PTHR10992 PTHR10992:SF891
NCBI CDD KOG1454; Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G03990 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os03g10620.2 : hydrolase, alpha/beta fold family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a053140 , Zm00025a001149
Brachypodium KQK23042 , KQK23043
Barley HORVU5Hr1G089150.1 , HORVU4Hr1G070070.1 , HORVU4Hr1G070070.2
Wheat TraesCS4A02G046700 , TraesCS4A02G046700 , TraesCS4B02G258200 , TraesCS4D02G258000 , TraesCS4D02G258000
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G465100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G042500 expressed protein -
2 Sobic.003G391100 helix-loop-helix DNA-binding domain containing protein, expressed -
3 Sobic.003G123300 zinc finger, C3HC4 type domain containing protein, expressed K16282: E3 ubiquitin-protein ligase RHA2
4 Sobic.001G078900 MYB(PubMedID : 28944535)@MYB family transcription factor, putative, expressed -
5 Sobic.004G325900 trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
6 Sobic.002G376700 EF hand family protein, putative -
7 Sobic.006G241350 - -
8 Sobic.004G096300 protein phosphatase 2C, putative, expressed -
9 Sobic.001G053900 nodulin, putative, expressed -
10 Sobic.007G028700 LSD1 zinc finger domain containing protein, expressed -
11 Sobic.003G013600 expressed protein -
12 Sobic.001G225400 expressed protein -
13 Sobic.010G246600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 16, putative, expressed -
14 Sobic.003G320600 membrane protein, putative, expressed -
15 Sobic.006G152600 - -
16 Sobic.009G213400 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
17 Sobic.002G367700 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
18 Sobic.005G002600 - -
19 Sobic.010G280100 expressed protein -
20 Sobic.002G226000 leucine-rich repeat family protein, putative, expressed -


Gene co-expression network
sample Sobic001G465100 Sobic001G465100 Sobic008G042500 Sobic008G042500 Sobic001G465100--Sobic008G042500 Sobic003G391100 Sobic003G391100 Sobic001G465100--Sobic003G391100 Sobic003G123300 Sobic003G123300 Sobic001G465100--Sobic003G123300 Sobic001G078900 Sobic001G078900 Sobic001G465100--Sobic001G078900 Sobic004G325900 Sobic004G325900 Sobic001G465100--Sobic004G325900 Sobic002G376700 Sobic002G376700 Sobic001G465100--Sobic002G376700 Sobic006G241350 Sobic006G241350 Sobic001G465100--Sobic006G241350 Sobic004G096300 Sobic004G096300 Sobic001G465100--Sobic004G096300 Sobic001G053900 Sobic001G053900 Sobic001G465100--Sobic001G053900 Sobic008G042500--Sobic001G465100 Sobic008G042500--Sobic004G096300 Sobic008G042500--Sobic003G391100 Sobic007G152101 Sobic007G152101 Sobic008G042500--Sobic007G152101 Sobic010G280100 Sobic010G280100 Sobic008G042500--Sobic010G280100 Sobic006G172900 Sobic006G172900 Sobic008G042500--Sobic006G172900 Sobic001G240800 Sobic001G240800 Sobic008G042500--Sobic001G240800 Sobic008G042500--Sobic001G053900 Sobic003G308700 Sobic003G308700 Sobic008G042500--Sobic003G308700 Sobic003G391100--Sobic001G465100 Sobic006G197800 Sobic006G197800 Sobic003G391100--Sobic006G197800 Sobic003G391100--Sobic008G042500 Sobic003G284300 Sobic003G284300 Sobic003G391100--Sobic003G284300 Sobic003G391100--Sobic001G053900 Sobic003G391100--Sobic003G123300 Sobic003G391100--Sobic004G096300 Sobic010G214000 Sobic010G214000 Sobic003G391100--Sobic010G214000 Sobic010G245100 Sobic010G245100 Sobic003G391100--Sobic010G245100 Sobic003G013600 Sobic003G013600 Sobic003G123300--Sobic003G013600 Sobic003G123300--Sobic001G465100 Sobic006G051100 Sobic006G051100 Sobic003G123300--Sobic006G051100 Sobic001G225600 Sobic001G225600 Sobic003G123300--Sobic001G225600 Sobic002G421600 Sobic002G421600 Sobic003G123300--Sobic002G421600 Sobic003G123300--Sobic006G241350 Sobic002G367700 Sobic002G367700 Sobic003G123300--Sobic002G367700 Sobic001G530350 Sobic001G530350 Sobic003G123300--Sobic001G530350 Sobic010G267000 Sobic010G267000 Sobic003G123300--Sobic010G267000 Sobic001G078900--Sobic004G325900 Sobic001G078900--Sobic001G465100 Sobic001G078900--Sobic006G241350 Sobic002G226000 Sobic002G226000 Sobic001G078900--Sobic002G226000 Sobic001G078900--Sobic002G367700 Sobic001G078900--Sobic003G123300 Sobic003G178700 Sobic003G178700 Sobic001G078900--Sobic003G178700 Sobic003G147401 Sobic003G147401 Sobic001G078900--Sobic003G147401 Sobic002G380400 Sobic002G380400 Sobic001G078900--Sobic002G380400 Sobic004G325900--Sobic001G078900 Sobic007G154701 Sobic007G154701 Sobic004G325900--Sobic007G154701 Sobic004G325900--Sobic006G241350 Sobic004G325900--Sobic001G465100 Sobic004G325900--Sobic003G147401 Sobic004G325900--Sobic003G123300 Sobic006G241600 Sobic006G241600 Sobic004G325900--Sobic006G241600 Sobic003G379700 Sobic003G379700 Sobic004G325900--Sobic003G379700 Sobic001G032100 Sobic001G032100 Sobic004G325900--Sobic001G032100 Sobic001G217700 Sobic001G217700 Sobic002G376700--Sobic001G217700 Sobic002G376700--Sobic001G053900 Sobic005G002600 Sobic005G002600 Sobic002G376700--Sobic005G002600 Sobic002G376700--Sobic001G465100 Sobic003G320600 Sobic003G320600 Sobic002G376700--Sobic003G320600 Sobic002G376700--Sobic010G214000 Sobic010G246600 Sobic010G246600 Sobic002G376700--Sobic010G246600 Sobic004G113800 Sobic004G113800 Sobic002G376700--Sobic004G113800 Sobic001G291200 Sobic001G291200 Sobic002G376700--Sobic001G291200 Sobic006G241400 Sobic006G241400 Sobic006G241350--Sobic006G241400 Sobic004G279700 Sobic004G279700 Sobic006G241350--Sobic004G279700 Sobic006G241350--Sobic004G325900 Sobic006G241350--Sobic006G241600 Sobic007G028700 Sobic007G028700 Sobic006G241350--Sobic007G028700 Sobic006G241350--Sobic002G367700 Sobic006G241350--Sobic001G078900 Sobic006G241350--Sobic003G123300 Sobic006G241350--Sobic001G465100 Sobic010G172200 Sobic010G172200 Sobic004G096300--Sobic010G172200 Sobic001G293800 Sobic001G293800 Sobic004G096300--Sobic001G293800 Sobic001G377000 Sobic001G377000 Sobic004G096300--Sobic001G377000 Sobic009G213400 Sobic009G213400 Sobic004G096300--Sobic009G213400 Sobic003G264901 Sobic003G264901 Sobic004G096300--Sobic003G264901 Sobic006G053700 Sobic006G053700 Sobic004G096300--Sobic006G053700 Sobic004G096300--Sobic001G053900 Sobic007G014600 Sobic007G014600 Sobic004G096300--Sobic007G014600 Sobic008G152200 Sobic008G152200 Sobic004G096300--Sobic008G152200 Sobic001G053900--Sobic004G096300 Sobic001G053900--Sobic002G376700 Sobic001G053900--Sobic010G214000 Sobic001G053900--Sobic001G291200 Sobic001G053900--Sobic003G264901 Sobic001G053900--Sobic004G113800 Sobic001G053900--Sobic006G172900 Sobic001G053900--Sobic008G152200 Sobic007G071000 Sobic007G071000 Sobic001G053900--Sobic007G071000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.