Gene annotation
Transcriptome id Sobic.001G225400.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QKD8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g32940.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G225400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G225500 expressed protein -
2 Sobic.001G377000 auxin-repressed protein, putative, expressed -
3 Sobic.001G293800 chloroplast beta-amylase(PubMedID : 26465154)@chloroplast beta-amylase(PubMedID : 26465154)@beta-amylase, putative, expressed K01177: beta-amylase
4 Sobic.003G013600 expressed protein -
5 Sobic.001G032100 BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
6 Sobic.003G320600 membrane protein, putative, expressed -
7 Sobic.010G172200 cytochrome P450, putative, expressed -
8 Sobic.001G465100 hydrolase, alpha/beta fold family domain containing protein, expressed -
9 Sobic.007G148200 auxin-repressed protein, putative, expressed -
10 Sobic.001G191200 a marker of bud dormancy(PubMedID : 16443694)@auxin-repressed protein, putative, expressed -
11 Sobic.005G085600 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
12 Sobic.004G096300 protein phosphatase 2C, putative, expressed -
13 Sobic.003G123300 zinc finger, C3HC4 type domain containing protein, expressed K16282: E3 ubiquitin-protein ligase RHA2
14 Sobic.006G279800 expressed protein -
15 Sobic.003G406700 expressed protein -
16 Sobic.002G376700 EF hand family protein, putative -
17 Sobic.010G246600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 16, putative, expressed -
18 Sobic.003G264901 - -
19 Sobic.001G225600 expressed protein -
20 Sobic.004G122500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type


Gene co-expression network
sample Sobic001G225400 Sobic001G225400 Sobic001G225500 Sobic001G225500 Sobic001G225400--Sobic001G225500 Sobic001G377000 Sobic001G377000 Sobic001G225400--Sobic001G377000 Sobic001G293800 Sobic001G293800 Sobic001G225400--Sobic001G293800 Sobic003G013600 Sobic003G013600 Sobic001G225400--Sobic003G013600 Sobic001G032100 Sobic001G032100 Sobic001G225400--Sobic001G032100 Sobic003G320600 Sobic003G320600 Sobic001G225400--Sobic003G320600 Sobic010G172200 Sobic010G172200 Sobic001G225400--Sobic010G172200 Sobic001G465100 Sobic001G465100 Sobic001G225400--Sobic001G465100 Sobic007G148200 Sobic007G148200 Sobic001G225400--Sobic007G148200 Sobic001G225500--Sobic001G225400 Sobic001G225500--Sobic001G377000 Sobic001G191200 Sobic001G191200 Sobic001G225500--Sobic001G191200 Sobic003G406700 Sobic003G406700 Sobic001G225500--Sobic003G406700 Sobic001G225500--Sobic010G172200 Sobic010G246600 Sobic010G246600 Sobic001G225500--Sobic010G246600 Sobic009G213400 Sobic009G213400 Sobic001G225500--Sobic009G213400 Sobic007G179750 Sobic007G179750 Sobic001G225500--Sobic007G179750 Sobic001G225500--Sobic003G320600 Sobic001G377000--Sobic001G191200 Sobic001G377000--Sobic009G213400 Sobic004G096300 Sobic004G096300 Sobic001G377000--Sobic004G096300 Sobic001G377000--Sobic003G406700 Sobic001G377000--Sobic007G148200 Sobic001G377000--Sobic001G293800 Sobic007G071000 Sobic007G071000 Sobic001G377000--Sobic007G071000 Sobic001G377000--Sobic010G172200 Sobic003G264901 Sobic003G264901 Sobic001G377000--Sobic003G264901 Sobic001G293800--Sobic004G096300 Sobic001G293800--Sobic003G264901 Sobic001G293800--Sobic001G377000 Sobic001G293800--Sobic010G172200 Sobic003G153800 Sobic003G153800 Sobic001G293800--Sobic003G153800 Sobic001G293800--Sobic007G071000 Sobic004G275200 Sobic004G275200 Sobic001G293800--Sobic004G275200 Sobic006G053700 Sobic006G053700 Sobic001G293800--Sobic006G053700 Sobic001G293800--Sobic001G225400 Sobic003G123300 Sobic003G123300 Sobic003G013600--Sobic003G123300 Sobic009G080200 Sobic009G080200 Sobic003G013600--Sobic009G080200 Sobic003G085700 Sobic003G085700 Sobic003G013600--Sobic003G085700 Sobic001G225600 Sobic001G225600 Sobic003G013600--Sobic001G225600 Sobic001G530350 Sobic001G530350 Sobic003G013600--Sobic001G530350 Sobic010G267000 Sobic010G267000 Sobic003G013600--Sobic010G267000 Sobic003G296300 Sobic003G296300 Sobic003G013600--Sobic003G296300 Sobic003G013600--Sobic001G293800 Sobic003G013600--Sobic001G225400 Sobic003G296600 Sobic003G296600 Sobic001G032100--Sobic003G296600 Sobic005G085600 Sobic005G085600 Sobic001G032100--Sobic005G085600 Sobic001G247400 Sobic001G247400 Sobic001G032100--Sobic001G247400 Sobic006G194150 Sobic006G194150 Sobic001G032100--Sobic006G194150 Sobic004G221900 Sobic004G221900 Sobic001G032100--Sobic004G221900 Sobic003G034500 Sobic003G034500 Sobic001G032100--Sobic003G034500 Sobic003G293900 Sobic003G293900 Sobic001G032100--Sobic003G293900 Sobic001G225100 Sobic001G225100 Sobic001G032100--Sobic001G225100 Sobic009G183500 Sobic009G183500 Sobic001G032100--Sobic009G183500 Sobic006G051100 Sobic006G051100 Sobic003G320600--Sobic006G051100 Sobic002G376700 Sobic002G376700 Sobic003G320600--Sobic002G376700 Sobic003G320600--Sobic001G225400 Sobic003G320600--Sobic001G225500 Sobic003G320600--Sobic003G013600 Sobic003G320600--Sobic003G123300 Sobic003G320600--Sobic001G465100 Sobic006G241350 Sobic006G241350 Sobic003G320600--Sobic006G241350 Sobic003G320600--Sobic001G191200 Sobic010G172200--Sobic004G096300 Sobic010G172200--Sobic003G264901 Sobic010G172200--Sobic006G053700 Sobic010G172200--Sobic001G293800 Sobic010G172200--Sobic001G377000 Sobic010G172200--Sobic007G071000 Sobic010G172200--Sobic001G225500 Sobic007G014600 Sobic007G014600 Sobic010G172200--Sobic007G014600 Sobic008G152200 Sobic008G152200 Sobic010G172200--Sobic008G152200 Sobic008G042500 Sobic008G042500 Sobic001G465100--Sobic008G042500 Sobic003G391100 Sobic003G391100 Sobic001G465100--Sobic003G391100 Sobic001G465100--Sobic003G123300 Sobic001G078900 Sobic001G078900 Sobic001G465100--Sobic001G078900 Sobic004G325900 Sobic004G325900 Sobic001G465100--Sobic004G325900 Sobic001G465100--Sobic002G376700 Sobic001G465100--Sobic006G241350 Sobic001G465100--Sobic004G096300 Sobic001G053900 Sobic001G053900 Sobic001G465100--Sobic001G053900 Sobic007G148200--Sobic001G377000 Sobic007G148200--Sobic004G275200 Sobic002G226000 Sobic002G226000 Sobic007G148200--Sobic002G226000 Sobic006G152600 Sobic006G152600 Sobic007G148200--Sobic006G152600 Sobic007G148200--Sobic001G293800 Sobic007G120401 Sobic007G120401 Sobic007G148200--Sobic007G120401 Sobic004G153400 Sobic004G153400 Sobic007G148200--Sobic004G153400 Sobic002G046800 Sobic002G046800 Sobic007G148200--Sobic002G046800 Sobic004G153501 Sobic004G153501 Sobic007G148200--Sobic004G153501
Octagon: transcription factors


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