Gene annotation
Transcriptome id Sobic.001G377000.1
Synonym Sb01g035780
Functional annotation auxin-repressed protein, putative, expressed
UniProt C5X0P6
Pfam PF05564
Panther DB PTHR33565 PTHR33565:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G56220 : Dormancy/auxin associated family protein
RAP-DB (Rice) LOC_Os03g22270.1 : auxin-repressed protein, putative, expressed
MaizeGDB (Corn) Zm00025a002395 , Zm00025a052405
Brachypodium KQK21754
Barley -
Wheat TraesCS4A02G158100 , TraesCS4B02G155000 , TraesCS4D02G169100
Populus -


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cDNA sequences
Sobic.001G377000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G191200 a marker of bud dormancy(PubMedID : 16443694)@auxin-repressed protein, putative, expressed -
2 Sobic.009G213400 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
3 Sobic.004G096300 protein phosphatase 2C, putative, expressed -
4 Sobic.003G406700 expressed protein -
5 Sobic.007G148200 auxin-repressed protein, putative, expressed -
6 Sobic.001G293800 chloroplast beta-amylase(PubMedID : 26465154)@chloroplast beta-amylase(PubMedID : 26465154)@beta-amylase, putative, expressed K01177: beta-amylase
7 Sobic.007G071000 no apical meristem protein, putative, expressed -
8 Sobic.010G172200 cytochrome P450, putative, expressed -
9 Sobic.003G264901 - -
10 Sobic.001G225500 expressed protein -
11 Sobic.001G031300 PPR repeat domain containing protein, putative, expressed -
12 Sobic.008G152200 DC1 domain-containing protein, putative, expressed -
13 Sobic.009G154600 glycosyl hydrolases family 17, putative, expressed -
14 Sobic.001G225400 expressed protein -
15 Sobic.006G053700 ACT domain containing protein, expressed -
16 Sobic.002G174900 cysteine desulfurase 1, mitochondrial precursor, putative, expressed K04487: iscS, cysteine desulfurase
17 Sobic.005G036700 expressed protein -
18 Sobic.002G226000 leucine-rich repeat family protein, putative, expressed -
19 Sobic.007G179750 - -
20 Sobic.004G275200 zinc-binding protein, putative, expressed -


Gene co-expression network
sample Sobic001G377000 Sobic001G377000 Sobic001G191200 Sobic001G191200 Sobic001G377000--Sobic001G191200 Sobic009G213400 Sobic009G213400 Sobic001G377000--Sobic009G213400 Sobic004G096300 Sobic004G096300 Sobic001G377000--Sobic004G096300 Sobic003G406700 Sobic003G406700 Sobic001G377000--Sobic003G406700 Sobic007G148200 Sobic007G148200 Sobic001G377000--Sobic007G148200 Sobic001G293800 Sobic001G293800 Sobic001G377000--Sobic001G293800 Sobic007G071000 Sobic007G071000 Sobic001G377000--Sobic007G071000 Sobic010G172200 Sobic010G172200 Sobic001G377000--Sobic010G172200 Sobic003G264901 Sobic003G264901 Sobic001G377000--Sobic003G264901 Sobic001G191200--Sobic003G406700 Sobic001G078200 Sobic001G078200 Sobic001G191200--Sobic001G078200 Sobic009G154600 Sobic009G154600 Sobic001G191200--Sobic009G154600 Sobic001G191200--Sobic001G377000 Sobic001G191200--Sobic009G213400 Sobic005G085200 Sobic005G085200 Sobic001G191200--Sobic005G085200 Sobic003G107300 Sobic003G107300 Sobic001G191200--Sobic003G107300 Sobic001G423100 Sobic001G423100 Sobic001G191200--Sobic001G423100 Sobic001G225500 Sobic001G225500 Sobic001G191200--Sobic001G225500 Sobic010G245100 Sobic010G245100 Sobic009G213400--Sobic010G245100 Sobic009G213400--Sobic001G377000 Sobic009G213400--Sobic004G096300 Sobic006G273000 Sobic006G273000 Sobic009G213400--Sobic006G273000 Sobic003G222300 Sobic003G222300 Sobic009G213400--Sobic003G222300 Sobic009G213400--Sobic001G191200 Sobic006G053700 Sobic006G053700 Sobic009G213400--Sobic006G053700 Sobic001G093600 Sobic001G093600 Sobic009G213400--Sobic001G093600 Sobic010G052500 Sobic010G052500 Sobic009G213400--Sobic010G052500 Sobic004G096300--Sobic010G172200 Sobic004G096300--Sobic001G293800 Sobic004G096300--Sobic001G377000 Sobic004G096300--Sobic009G213400 Sobic004G096300--Sobic003G264901 Sobic004G096300--Sobic006G053700 Sobic001G053900 Sobic001G053900 Sobic004G096300--Sobic001G053900 Sobic007G014600 Sobic007G014600 Sobic004G096300--Sobic007G014600 Sobic008G152200 Sobic008G152200 Sobic004G096300--Sobic008G152200 Sobic003G406700--Sobic001G191200 Sobic003G406700--Sobic001G377000 Sobic003G406700--Sobic009G154600 Sobic003G406700--Sobic003G107300 Sobic003G406700--Sobic001G423100 Sobic003G406700--Sobic001G225500 Sobic006G279800 Sobic006G279800 Sobic003G406700--Sobic006G279800 Sobic001G031300 Sobic001G031300 Sobic003G406700--Sobic001G031300 Sobic002G331000 Sobic002G331000 Sobic003G406700--Sobic002G331000 Sobic007G148200--Sobic001G377000 Sobic004G275200 Sobic004G275200 Sobic007G148200--Sobic004G275200 Sobic002G226000 Sobic002G226000 Sobic007G148200--Sobic002G226000 Sobic006G152600 Sobic006G152600 Sobic007G148200--Sobic006G152600 Sobic007G148200--Sobic001G293800 Sobic007G120401 Sobic007G120401 Sobic007G148200--Sobic007G120401 Sobic004G153400 Sobic004G153400 Sobic007G148200--Sobic004G153400 Sobic002G046800 Sobic002G046800 Sobic007G148200--Sobic002G046800 Sobic004G153501 Sobic004G153501 Sobic007G148200--Sobic004G153501 Sobic001G293800--Sobic004G096300 Sobic001G293800--Sobic003G264901 Sobic001G293800--Sobic001G377000 Sobic001G293800--Sobic010G172200 Sobic003G153800 Sobic003G153800 Sobic001G293800--Sobic003G153800 Sobic001G293800--Sobic007G071000 Sobic001G293800--Sobic004G275200 Sobic001G293800--Sobic006G053700 Sobic001G225400 Sobic001G225400 Sobic001G293800--Sobic001G225400 Sobic007G071000--Sobic008G152200 Sobic007G071000--Sobic001G377000 Sobic007G071000--Sobic004G096300 Sobic007G071000--Sobic003G264901 Sobic007G071000--Sobic010G172200 Sobic007G071000--Sobic001G293800 Sobic007G071000--Sobic003G153800 Sobic009G205600 Sobic009G205600 Sobic007G071000--Sobic009G205600 Sobic007G071000--Sobic001G053900 Sobic010G172200--Sobic004G096300 Sobic010G172200--Sobic003G264901 Sobic010G172200--Sobic006G053700 Sobic010G172200--Sobic001G293800 Sobic010G172200--Sobic001G377000 Sobic010G172200--Sobic007G071000 Sobic010G172200--Sobic001G225500 Sobic010G172200--Sobic007G014600 Sobic010G172200--Sobic008G152200 Sobic003G264901--Sobic004G096300 Sobic003G264901--Sobic010G172200 Sobic003G264901--Sobic001G293800 Sobic003G264901--Sobic006G053700 Sobic003G264901--Sobic007G071000 Sobic003G264901--Sobic001G377000 Sobic003G264901--Sobic009G205600 Sobic003G264901--Sobic003G153800 Sobic003G264901--Sobic001G053900
Octagon: transcription factors


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