Gene annotation
Transcriptome id Sobic.004G275200.3,Sobic.004G275200.2,Sobic.004G275200.1
Synonym Sb04g031230
Functional annotation zinc-binding protein, putative, expressed
UniProt A0A194YRV9 , A0A194YRW0 , A0A194YT18
Pfam PF04640
Panther DB PTHR31065 PTHR31065:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G17900 : PLATZ transcription factor family protein
RAP-DB (Rice) LOC_Os02g46610.1 : zinc-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a051825 , Zm00025a056724 , Zm00025a032374 , Zm00025a021604 , Zm00025a009996
Brachypodium KQK00840 , KQJ84303 , KQJ97925 , PNT69258
Barley HORVU1Hr1G050480.4 , HORVU6Hr1G067060.1 , HORVU6Hr1G067060.3 , HORVU6Hr1G067060.2 , HORVU6Hr1G067060.5 , HORVU6Hr1G067060.4 , HORVU6Hr1G067060.7 , HORVU6Hr1G067060.6 , HORVU1Hr1G050480.2 , HORVU1Hr1G050480.3 , HORVU1Hr1G050480.1 , HORVU1Hr1G050480.6 , HORVU1Hr1G050480.5
Wheat TraesCS2D02G447400 , TraesCS1D02G196400 , TraesCS6A02G264400 , TraesCS6A02G264400 , TraesCS2B02G469000 , TraesCS6B02G291400 , TraesCS6D02G250500 , TraesCS2A02G496300 , TraesCS1B02G207700 , TraesCS1A02G192800 , TraesCS2A02G448300
Populus PNT44576 , PNT44577 , PNT44575


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cDNA sequences
Sobic.004G275200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G152600 - -
2 Sobic.007G148200 auxin-repressed protein, putative, expressed -
3 Sobic.001G293800 chloroplast beta-amylase(PubMedID : 26465154)@chloroplast beta-amylase(PubMedID : 26465154)@beta-amylase, putative, expressed K01177: beta-amylase
4 Sobic.008G094700 no apical meristem protein, putative, expressed -
5 Sobic.002G130700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@thiol protease SEN102 precursor, putative, expressed -
6 Sobic.003G308700 BTBA2 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
7 Sobic.001G377000 auxin-repressed protein, putative, expressed -
8 Sobic.005G129400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.009G080200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CAPIP1, putative, expressed K14496: abscisic acid receptor PYR/PYL family
10 Sobic.007G120401 - -
11 Sobic.004G096300 protein phosphatase 2C, putative, expressed -
12 Sobic.009G245700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.007G054100 stress-induced protein, putative, expressed -
14 Sobic.003G013600 expressed protein -
15 Sobic.005G229400 GRAS family transcription factor domain containing protein, expressed -
16 Sobic.001G084700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
17 Sobic.001G285000 - -
18 Sobic.009G213400 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
19 Sobic.008G042500 expressed protein -
20 Sobic.002G174900 cysteine desulfurase 1, mitochondrial precursor, putative, expressed K04487: iscS, cysteine desulfurase


Gene co-expression network
sample Sobic004G275200 Sobic004G275200 Sobic006G152600 Sobic006G152600 Sobic004G275200--Sobic006G152600 Sobic007G148200 Sobic007G148200 Sobic004G275200--Sobic007G148200 Sobic001G293800 Sobic001G293800 Sobic004G275200--Sobic001G293800 Sobic008G094700 Sobic008G094700 Sobic004G275200--Sobic008G094700 Sobic002G130700 Sobic002G130700 Sobic004G275200--Sobic002G130700 Sobic003G308700 Sobic003G308700 Sobic004G275200--Sobic003G308700 Sobic001G377000 Sobic001G377000 Sobic004G275200--Sobic001G377000 Sobic005G129400 Sobic005G129400 Sobic004G275200--Sobic005G129400 Sobic009G080200 Sobic009G080200 Sobic004G275200--Sobic009G080200 Sobic006G152600--Sobic004G275200 Sobic006G152600--Sobic007G148200 Sobic006G152600--Sobic005G129400 Sobic002G226000 Sobic002G226000 Sobic006G152600--Sobic002G226000 Sobic004G153600 Sobic004G153600 Sobic006G152600--Sobic004G153600 Sobic006G152600--Sobic008G094700 Sobic002G020800 Sobic002G020800 Sobic006G152600--Sobic002G020800 Sobic001G465100 Sobic001G465100 Sobic006G152600--Sobic001G465100 Sobic007G154701 Sobic007G154701 Sobic006G152600--Sobic007G154701 Sobic007G148200--Sobic001G377000 Sobic007G148200--Sobic004G275200 Sobic007G148200--Sobic002G226000 Sobic007G148200--Sobic006G152600 Sobic007G148200--Sobic001G293800 Sobic007G120401 Sobic007G120401 Sobic007G148200--Sobic007G120401 Sobic004G153400 Sobic004G153400 Sobic007G148200--Sobic004G153400 Sobic002G046800 Sobic002G046800 Sobic007G148200--Sobic002G046800 Sobic004G153501 Sobic004G153501 Sobic007G148200--Sobic004G153501 Sobic004G096300 Sobic004G096300 Sobic001G293800--Sobic004G096300 Sobic003G264901 Sobic003G264901 Sobic001G293800--Sobic003G264901 Sobic001G293800--Sobic001G377000 Sobic010G172200 Sobic010G172200 Sobic001G293800--Sobic010G172200 Sobic003G153800 Sobic003G153800 Sobic001G293800--Sobic003G153800 Sobic007G071000 Sobic007G071000 Sobic001G293800--Sobic007G071000 Sobic001G293800--Sobic004G275200 Sobic006G053700 Sobic006G053700 Sobic001G293800--Sobic006G053700 Sobic001G225400 Sobic001G225400 Sobic001G293800--Sobic001G225400 Sobic008G094700--Sobic004G153600 Sobic003G379700 Sobic003G379700 Sobic008G094700--Sobic003G379700 Sobic008G094700--Sobic004G275200 Sobic008G094700--Sobic007G154701 Sobic008G094700--Sobic006G152600 Sobic003G081100 Sobic003G081100 Sobic008G094700--Sobic003G081100 Sobic001G076000 Sobic001G076000 Sobic008G094700--Sobic001G076000 Sobic003G127400 Sobic003G127400 Sobic008G094700--Sobic003G127400 Sobic002G241400 Sobic002G241400 Sobic008G094700--Sobic002G241400 Sobic009G034800 Sobic009G034800 Sobic002G130700--Sobic009G034800 Sobic002G130700--Sobic004G275200 Sobic002G130700--Sobic005G129400 Sobic004G174100 Sobic004G174100 Sobic002G130700--Sobic004G174100 Sobic006G242000 Sobic006G242000 Sobic002G130700--Sobic006G242000 Sobic002G027700 Sobic002G027700 Sobic002G130700--Sobic002G027700 Sobic009G245700 Sobic009G245700 Sobic002G130700--Sobic009G245700 Sobic001G427200 Sobic001G427200 Sobic002G130700--Sobic001G427200 Sobic002G130700--Sobic002G241400 Sobic002G073900 Sobic002G073900 Sobic003G308700--Sobic002G073900 Sobic007G054100 Sobic007G054100 Sobic003G308700--Sobic007G054100 Sobic002G174900 Sobic002G174900 Sobic003G308700--Sobic002G174900 Sobic002G273700 Sobic002G273700 Sobic003G308700--Sobic002G273700 Sobic006G172900 Sobic006G172900 Sobic003G308700--Sobic006G172900 Sobic009G094800 Sobic009G094800 Sobic003G308700--Sobic009G094800 Sobic001G387600 Sobic001G387600 Sobic003G308700--Sobic001G387600 Sobic009G008100 Sobic009G008100 Sobic003G308700--Sobic009G008100 Sobic002G187801 Sobic002G187801 Sobic003G308700--Sobic002G187801 Sobic001G191200 Sobic001G191200 Sobic001G377000--Sobic001G191200 Sobic009G213400 Sobic009G213400 Sobic001G377000--Sobic009G213400 Sobic001G377000--Sobic004G096300 Sobic003G406700 Sobic003G406700 Sobic001G377000--Sobic003G406700 Sobic001G377000--Sobic007G148200 Sobic001G377000--Sobic001G293800 Sobic001G377000--Sobic007G071000 Sobic001G377000--Sobic010G172200 Sobic001G377000--Sobic003G264901 Sobic005G129400--Sobic006G152600 Sobic005G129400--Sobic004G275200 Sobic001G123000 Sobic001G123000 Sobic005G129400--Sobic001G123000 Sobic005G129400--Sobic002G130700 Sobic008G001400 Sobic008G001400 Sobic005G129400--Sobic008G001400 Sobic005G129400--Sobic009G245700 Sobic005G129400--Sobic007G148200 Sobic001G427500 Sobic001G427500 Sobic005G129400--Sobic001G427500 Sobic010G084000 Sobic010G084000 Sobic005G129400--Sobic010G084000 Sobic003G013600 Sobic003G013600 Sobic009G080200--Sobic003G013600 Sobic001G285000 Sobic001G285000 Sobic009G080200--Sobic001G285000 Sobic002G117200 Sobic002G117200 Sobic009G080200--Sobic002G117200 Sobic009G080200--Sobic004G275200 Sobic002G123200 Sobic002G123200 Sobic009G080200--Sobic002G123200 Sobic009G156300 Sobic009G156300 Sobic009G080200--Sobic009G156300 Sobic003G123300 Sobic003G123300 Sobic009G080200--Sobic003G123300 Sobic001G078200 Sobic001G078200 Sobic009G080200--Sobic001G078200 Sobic002G194700 Sobic002G194700 Sobic009G080200--Sobic002G194700
Octagon: transcription factors


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