Gene annotation
Transcriptome id Sobic.006G152600.1
Synonym YSL7, Sb06g023010
Functional annotation -
UniProt C5YCG5
Pfam PF03169
Panther DB PTHR31645 PTHR31645:SF18
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65730 : YELLOW STRIPE like 7
RAP-DB (Rice) LOC_Os04g44320.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a032072 , Zm00025a057370 , Zm00025a010612 , Zm00025a010614 , Zm00025a036017 , Zm00025a021051 , Zm00025a057367 , Zm00025a035063 , Zm00025a056538 , Zm00025a056537
Brachypodium KQJ82291 , KQJ82292 , KQK00455 , KQJ83669 , KQJ83668 , PNT69110 , PNT61516 , KQJ85264 , KQJ83671 , PNT60923
Barley HORVU2Hr1G120250.1 , HORVU2Hr1G120250.2 , HORVU2Hr1G070320.23 , HORVU2Hr1G090280.20 , HORVU2Hr1G090280.21 , HORVU2Hr1G090280.5 , HORVU6Hr1G059420.4 , HORVU6Hr1G059420.1 , HORVU6Hr1G059420.2 , HORVU6Hr1G059420.3 , HORVU2Hr1G070320.1 , HORVU2Hr1G070320.7 , HORVU2Hr1G070320.4 , HORVU2Hr1G070320.5 , HORVU2Hr1G090240.3 , HORVU2Hr1G090240.2 , HORVU2Hr1G090240.1 , HORVU2Hr1G070320.18 , HORVU2Hr1G070320.19 , HORVU2Hr1G090380.8 , HORVU2Hr1G090380.2 , HORVU2Hr1G090380.3 , HORVU2Hr1G090380.1 , HORVU2Hr1G090380.6 , HORVU2Hr1G090380.7 , HORVU2Hr1G090380.4 , HORVU2Hr1G090380.5 , HORVU2Hr1G070320.22 , HORVU2Hr1G099860.1 , HORVU2Hr1G099860.2 , HORVU2Hr1G099860.3 , HORVU2Hr1G070320.26 , HORVU2Hr1G070300.1 , HORVU2Hr1G070300.2 , HORVU2Hr1G090280.17 , HORVU2Hr1G090280.16 , HORVU2Hr1G090280.15 , HORVU2Hr1G090280.14 , HORVU2Hr1G090280.13 , HORVU2Hr1G090280.12 , HORVU2Hr1G090280.11 , HORVU2Hr1G090280.10 , HORVU2Hr1G090280.19 , HORVU2Hr1G090280.18 , HORVU2Hr1G070320.10 , HORVU2Hr1G070320.11 , HORVU2Hr1G090310.5 , HORVU2Hr1G070320.12 , HORVU2Hr1G090310.1 , HORVU2Hr1G090310.3 , HORVU2Hr1G090310.2 , HORVU2Hr1G090310.4 , HORVU2Hr1G090310.6
Wheat TraesCS2D02G283400 , TraesCS2D02G484200 , TraesCS2D02G484200 , TraesCS6D02G214100 , TraesCS6B02G059100 , TraesCS2D02G373800 , TraesCS2B02G393600 , TraesCS2A02G484200 , TraesCS2A02G484200 , TraesCS2A02G284900 , TraesCS6D02G214300 , TraesCS6B02G262400 , TraesCS2B02G394500 , TraesCS2A02G376700 , TraesCS2B02G302000 , TraesCS2A02G284700 , TraesCS2B02G585300 , TraesCS6A02G221100 , TraesCS2D02G374000 , TraesCS2B02G301800 , TraesCS2D02G081000 , TraesCS6D02G049900 , TraesCS2A02G083400 , TraesCS2B02G097400 , TraesCS2B02G097400 , TraesCS6A02G043100 , TraesCS2A02G377600 , TraesCS2A02G377200 , TraesCS2D02G283600 , TraesCS2B02G394400 , TraesCS2B02G394600 , TraesCS2D02G373100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G275200 zinc-binding protein, putative, expressed -
2 Sobic.007G148200 auxin-repressed protein, putative, expressed -
3 Sobic.005G129400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.002G226000 leucine-rich repeat family protein, putative, expressed -
5 Sobic.004G153600 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
6 Sobic.008G094700 no apical meristem protein, putative, expressed -
7 Sobic.002G020800 expressed protein -
8 Sobic.001G465100 hydrolase, alpha/beta fold family domain containing protein, expressed -
9 Sobic.007G154701 - -
10 Sobic.003G085700 expressed protein -
11 Sobic.004G325900 trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
12 Sobic.001G078200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.005G229400 GRAS family transcription factor domain containing protein, expressed -
14 Sobic.009G213400 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
15 Sobic.001G377000 auxin-repressed protein, putative, expressed -
16 Sobic.003G013600 expressed protein -
17 Sobic.001G293800 chloroplast beta-amylase(PubMedID : 26465154)@chloroplast beta-amylase(PubMedID : 26465154)@beta-amylase, putative, expressed K01177: beta-amylase
18 Sobic.004G153400 OsFBK7 - F-box domain and kelch repeat containing protein, expressed -
19 Sobic.009G080200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CAPIP1, putative, expressed K14496: abscisic acid receptor PYR/PYL family
20 Sobic.003G379700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Increased expression in phyB-1 mutant(PubMedID : 26893475)@No apical meristem protein, putative, expressed -


Gene co-expression network
sample Sobic006G152600 Sobic006G152600 Sobic004G275200 Sobic004G275200 Sobic006G152600--Sobic004G275200 Sobic007G148200 Sobic007G148200 Sobic006G152600--Sobic007G148200 Sobic005G129400 Sobic005G129400 Sobic006G152600--Sobic005G129400 Sobic002G226000 Sobic002G226000 Sobic006G152600--Sobic002G226000 Sobic004G153600 Sobic004G153600 Sobic006G152600--Sobic004G153600 Sobic008G094700 Sobic008G094700 Sobic006G152600--Sobic008G094700 Sobic002G020800 Sobic002G020800 Sobic006G152600--Sobic002G020800 Sobic001G465100 Sobic001G465100 Sobic006G152600--Sobic001G465100 Sobic007G154701 Sobic007G154701 Sobic006G152600--Sobic007G154701 Sobic004G275200--Sobic006G152600 Sobic004G275200--Sobic007G148200 Sobic001G293800 Sobic001G293800 Sobic004G275200--Sobic001G293800 Sobic004G275200--Sobic008G094700 Sobic002G130700 Sobic002G130700 Sobic004G275200--Sobic002G130700 Sobic003G308700 Sobic003G308700 Sobic004G275200--Sobic003G308700 Sobic001G377000 Sobic001G377000 Sobic004G275200--Sobic001G377000 Sobic004G275200--Sobic005G129400 Sobic009G080200 Sobic009G080200 Sobic004G275200--Sobic009G080200 Sobic007G148200--Sobic001G377000 Sobic007G148200--Sobic004G275200 Sobic007G148200--Sobic002G226000 Sobic007G148200--Sobic006G152600 Sobic007G148200--Sobic001G293800 Sobic007G120401 Sobic007G120401 Sobic007G148200--Sobic007G120401 Sobic004G153400 Sobic004G153400 Sobic007G148200--Sobic004G153400 Sobic002G046800 Sobic002G046800 Sobic007G148200--Sobic002G046800 Sobic004G153501 Sobic004G153501 Sobic007G148200--Sobic004G153501 Sobic005G129400--Sobic006G152600 Sobic005G129400--Sobic004G275200 Sobic001G123000 Sobic001G123000 Sobic005G129400--Sobic001G123000 Sobic005G129400--Sobic002G130700 Sobic008G001400 Sobic008G001400 Sobic005G129400--Sobic008G001400 Sobic009G245700 Sobic009G245700 Sobic005G129400--Sobic009G245700 Sobic005G129400--Sobic007G148200 Sobic001G427500 Sobic001G427500 Sobic005G129400--Sobic001G427500 Sobic010G084000 Sobic010G084000 Sobic005G129400--Sobic010G084000 Sobic009G198900 Sobic009G198900 Sobic002G226000--Sobic009G198900 Sobic003G324000 Sobic003G324000 Sobic002G226000--Sobic003G324000 Sobic002G226000--Sobic007G148200 Sobic001G543800 Sobic001G543800 Sobic002G226000--Sobic001G543800 Sobic001G194900 Sobic001G194900 Sobic002G226000--Sobic001G194900 Sobic002G226000--Sobic004G153400 Sobic010G280100 Sobic010G280100 Sobic002G226000--Sobic010G280100 Sobic002G226000--Sobic006G152600 Sobic009G180200 Sobic009G180200 Sobic002G226000--Sobic009G180200 Sobic001G424700 Sobic001G424700 Sobic004G153600--Sobic001G424700 Sobic003G081100 Sobic003G081100 Sobic004G153600--Sobic003G081100 Sobic003G333600 Sobic003G333600 Sobic004G153600--Sobic003G333600 Sobic009G137800 Sobic009G137800 Sobic004G153600--Sobic009G137800 Sobic010G260500 Sobic010G260500 Sobic004G153600--Sobic010G260500 Sobic007G078000 Sobic007G078000 Sobic004G153600--Sobic007G078000 Sobic004G153600--Sobic003G324000 Sobic002G284200 Sobic002G284200 Sobic004G153600--Sobic002G284200 Sobic004G153600--Sobic008G094700 Sobic008G094700--Sobic004G153600 Sobic003G379700 Sobic003G379700 Sobic008G094700--Sobic003G379700 Sobic008G094700--Sobic004G275200 Sobic008G094700--Sobic007G154701 Sobic008G094700--Sobic006G152600 Sobic008G094700--Sobic003G081100 Sobic001G076000 Sobic001G076000 Sobic008G094700--Sobic001G076000 Sobic003G127400 Sobic003G127400 Sobic008G094700--Sobic003G127400 Sobic002G241400 Sobic002G241400 Sobic008G094700--Sobic002G241400 Sobic002G020800--Sobic006G152600 Sobic002G020800--Sobic002G226000 Sobic009G107500 Sobic009G107500 Sobic002G020800--Sobic009G107500 Sobic002G020800--Sobic008G094700 Sobic002G020800--Sobic004G153600 Sobic010G273600 Sobic010G273600 Sobic002G020800--Sobic010G273600 Sobic002G020800--Sobic004G275200 Sobic001G084700 Sobic001G084700 Sobic002G020800--Sobic001G084700 Sobic001G144400 Sobic001G144400 Sobic002G020800--Sobic001G144400 Sobic008G042500 Sobic008G042500 Sobic001G465100--Sobic008G042500 Sobic003G391100 Sobic003G391100 Sobic001G465100--Sobic003G391100 Sobic003G123300 Sobic003G123300 Sobic001G465100--Sobic003G123300 Sobic001G078900 Sobic001G078900 Sobic001G465100--Sobic001G078900 Sobic004G325900 Sobic004G325900 Sobic001G465100--Sobic004G325900 Sobic002G376700 Sobic002G376700 Sobic001G465100--Sobic002G376700 Sobic006G241350 Sobic006G241350 Sobic001G465100--Sobic006G241350 Sobic004G096300 Sobic004G096300 Sobic001G465100--Sobic004G096300 Sobic001G053900 Sobic001G053900 Sobic001G465100--Sobic001G053900 Sobic007G154701--Sobic004G325900 Sobic009G022000 Sobic009G022000 Sobic007G154701--Sobic009G022000 Sobic007G002200 Sobic007G002200 Sobic007G154701--Sobic007G002200 Sobic001G225100 Sobic001G225100 Sobic007G154701--Sobic001G225100 Sobic007G154701--Sobic008G094700 Sobic007G154701--Sobic004G153600 Sobic007G154701--Sobic001G076000 Sobic001G247400 Sobic001G247400 Sobic007G154701--Sobic001G247400 Sobic009G183500 Sobic009G183500 Sobic007G154701--Sobic009G183500
Octagon: transcription factors


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