Gene annotation
Transcriptome id Sobic.002G020800.1
Synonym Sb02g001930
Functional annotation expressed protein
UniProt C5X8P0
Pfam -
Panther DB PTHR33526 PTHR33526:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G37700 : -
RAP-DB (Rice) LOC_Os03g55980.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G152600 - -
2 Sobic.002G226000 leucine-rich repeat family protein, putative, expressed -
3 Sobic.009G107500 - -
4 Sobic.008G094700 no apical meristem protein, putative, expressed -
5 Sobic.004G153600 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
6 Sobic.010G273600 CHIT8 - Chitinase family protein precursor, expressed K01183: chitinase
7 Sobic.004G275200 zinc-binding protein, putative, expressed -
8 Sobic.001G084700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
9 Sobic.001G144400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acetyltransferase, GNAT family, putative, expressed -
10 Sobic.007G154701 - -
11 Sobic.007G148200 auxin-repressed protein, putative, expressed -
12 Sobic.009G022000 white-brown complex homolog protein 16, putative, expressed -
13 Sobic.006G190000 naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed -
14 Sobic.003G081100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@OsWAK2 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
15 Sobic.003G147401 - -
16 Sobic.002G425300 zinc finger, C3HC4 type domain containing protein, expressed K16282: E3 ubiquitin-protein ligase RHA2
17 Sobic.010G242300 TKL_IRAK_DUF26-lh.6 - DUF26 kinases have homology to DUF26 containing loci, expressed -
18 Sobic.007G054100 stress-induced protein, putative, expressed -
19 Sobic.004G207300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
20 Sobic.001G053900 nodulin, putative, expressed -


Gene co-expression network
sample Sobic002G020800 Sobic002G020800 Sobic006G152600 Sobic006G152600 Sobic002G020800--Sobic006G152600 Sobic002G226000 Sobic002G226000 Sobic002G020800--Sobic002G226000 Sobic009G107500 Sobic009G107500 Sobic002G020800--Sobic009G107500 Sobic008G094700 Sobic008G094700 Sobic002G020800--Sobic008G094700 Sobic004G153600 Sobic004G153600 Sobic002G020800--Sobic004G153600 Sobic010G273600 Sobic010G273600 Sobic002G020800--Sobic010G273600 Sobic004G275200 Sobic004G275200 Sobic002G020800--Sobic004G275200 Sobic001G084700 Sobic001G084700 Sobic002G020800--Sobic001G084700 Sobic001G144400 Sobic001G144400 Sobic002G020800--Sobic001G144400 Sobic006G152600--Sobic004G275200 Sobic007G148200 Sobic007G148200 Sobic006G152600--Sobic007G148200 Sobic005G129400 Sobic005G129400 Sobic006G152600--Sobic005G129400 Sobic006G152600--Sobic002G226000 Sobic006G152600--Sobic004G153600 Sobic006G152600--Sobic008G094700 Sobic006G152600--Sobic002G020800 Sobic001G465100 Sobic001G465100 Sobic006G152600--Sobic001G465100 Sobic007G154701 Sobic007G154701 Sobic006G152600--Sobic007G154701 Sobic009G198900 Sobic009G198900 Sobic002G226000--Sobic009G198900 Sobic003G324000 Sobic003G324000 Sobic002G226000--Sobic003G324000 Sobic002G226000--Sobic007G148200 Sobic001G543800 Sobic001G543800 Sobic002G226000--Sobic001G543800 Sobic001G194900 Sobic001G194900 Sobic002G226000--Sobic001G194900 Sobic004G153400 Sobic004G153400 Sobic002G226000--Sobic004G153400 Sobic010G280100 Sobic010G280100 Sobic002G226000--Sobic010G280100 Sobic002G226000--Sobic006G152600 Sobic009G180200 Sobic009G180200 Sobic002G226000--Sobic009G180200 Sobic010G242300 Sobic010G242300 Sobic009G107500--Sobic010G242300 Sobic002G425300 Sobic002G425300 Sobic009G107500--Sobic002G425300 Sobic009G110366 Sobic009G110366 Sobic009G107500--Sobic009G110366 Sobic004G291800 Sobic004G291800 Sobic009G107500--Sobic004G291800 Sobic005G096300 Sobic005G096300 Sobic009G107500--Sobic005G096300 Sobic009G197200 Sobic009G197200 Sobic009G107500--Sobic009G197200 Sobic002G171700 Sobic002G171700 Sobic009G107500--Sobic002G171700 Sobic009G107500--Sobic002G226000 Sobic009G107500--Sobic009G198900 Sobic008G094700--Sobic004G153600 Sobic003G379700 Sobic003G379700 Sobic008G094700--Sobic003G379700 Sobic008G094700--Sobic004G275200 Sobic008G094700--Sobic007G154701 Sobic008G094700--Sobic006G152600 Sobic003G081100 Sobic003G081100 Sobic008G094700--Sobic003G081100 Sobic001G076000 Sobic001G076000 Sobic008G094700--Sobic001G076000 Sobic003G127400 Sobic003G127400 Sobic008G094700--Sobic003G127400 Sobic002G241400 Sobic002G241400 Sobic008G094700--Sobic002G241400 Sobic001G424700 Sobic001G424700 Sobic004G153600--Sobic001G424700 Sobic004G153600--Sobic003G081100 Sobic003G333600 Sobic003G333600 Sobic004G153600--Sobic003G333600 Sobic009G137800 Sobic009G137800 Sobic004G153600--Sobic009G137800 Sobic010G260500 Sobic010G260500 Sobic004G153600--Sobic010G260500 Sobic007G078000 Sobic007G078000 Sobic004G153600--Sobic007G078000 Sobic004G153600--Sobic003G324000 Sobic002G284200 Sobic002G284200 Sobic004G153600--Sobic002G284200 Sobic004G153600--Sobic008G094700 Sobic004G052500 Sobic004G052500 Sobic010G273600--Sobic004G052500 Sobic010G273600--Sobic002G425300 Sobic008G183300 Sobic008G183300 Sobic010G273600--Sobic008G183300 Sobic001G259500 Sobic001G259500 Sobic010G273600--Sobic001G259500 Sobic001G146500 Sobic001G146500 Sobic010G273600--Sobic001G146500 Sobic004G275200--Sobic006G152600 Sobic004G275200--Sobic007G148200 Sobic001G293800 Sobic001G293800 Sobic004G275200--Sobic001G293800 Sobic004G275200--Sobic008G094700 Sobic002G130700 Sobic002G130700 Sobic004G275200--Sobic002G130700 Sobic003G308700 Sobic003G308700 Sobic004G275200--Sobic003G308700 Sobic001G377000 Sobic001G377000 Sobic004G275200--Sobic001G377000 Sobic004G275200--Sobic005G129400 Sobic009G080200 Sobic009G080200 Sobic004G275200--Sobic009G080200 Sobic001G084700--Sobic004G275200 Sobic001G084700--Sobic007G148200 Sobic001G084700--Sobic001G377000 Sobic009G245700 Sobic009G245700 Sobic001G084700--Sobic009G245700 Sobic006G053700 Sobic006G053700 Sobic001G084700--Sobic006G053700 Sobic001G084700--Sobic002G020800 Sobic001G191200 Sobic001G191200 Sobic001G084700--Sobic001G191200 Sobic001G084700--Sobic006G152600 Sobic001G084700--Sobic001G293800 Sobic006G190000 Sobic006G190000 Sobic001G144400--Sobic006G190000 Sobic006G167800 Sobic006G167800 Sobic001G144400--Sobic006G167800 Sobic002G376000 Sobic002G376000 Sobic001G144400--Sobic002G376000 Sobic006G097800 Sobic006G097800 Sobic001G144400--Sobic006G097800 Sobic010G018300 Sobic010G018300 Sobic001G144400--Sobic010G018300 Sobic003G123300 Sobic003G123300 Sobic001G144400--Sobic003G123300 Sobic001G526000 Sobic001G526000 Sobic001G144400--Sobic001G526000 Sobic010G210600 Sobic010G210600 Sobic001G144400--Sobic010G210600 Sobic002G067000 Sobic002G067000 Sobic001G144400--Sobic002G067000
Octagon: transcription factors


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