Gene annotation
Transcriptome id Sobic.010G273600.1
Synonym ATHCHIB, PR3, PR-3, HCHIB, B-CHI, CHI-B
Functional annotation CHIT8 - Chitinase family protein precursor, expressed
UniProt -
Pfam PF00187 PF00182
Panther DB PTHR22595 PTHR22595:SF34
NCBI CDD KOG4742; Predicted chitinase
KEGG Orthology K01183; chitinase
Gene Ontology GO:0008061; chitin binding GO:0016998cell wall macromolecule catabolic process GO:0006032chitin catabolic process GO:0004568chitinase activity


Orthologs (automatic annotation)
TAIR AT3G12500 : basic chitinase
RAP-DB (Rice) LOC_Os03g30470.1 : CHIT4 - Chitinase family protein precursor, expressed
MaizeGDB (Corn) Zm00025a041699 , Zm00025a041698 , Zm00025a000465 , Zm00025a000464
Brachypodium -
Barley HORVU7Hr1G113270.1 , HORVU7Hr1G113270.3 , HORVU7Hr1G113270.2 , HORVU7Hr1G113270.5 , HORVU7Hr1G113270.4 , HORVU7Hr1G113270.6 , HORVU7Hr1G113270.9 , HORVU7Hr1G113270.8 , HORVU7Hr1G113270.10
Wheat TraesCS3B02G293400
Populus -


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cDNA sequences
Sobic.010G273600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G052500 - -
2 Sobic.002G425300 zinc finger, C3HC4 type domain containing protein, expressed K16282: E3 ubiquitin-protein ligase RHA2
3 Sobic.008G183300 thaumatin, putative, expressed -
4 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
5 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
6 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
7 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
8 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
9 Sobic.001G146500 OsSAUR17 - Auxin-responsive SAUR gene family member, expressed -
10 Sobic.005G082700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
11 Sobic.009G241500 expressed protein -
12 Sobic.006G246200 protein kinase, putative, expressed -
13 Sobic.001G544000 nuclear transport factor, putative, expressed -
14 Sobic.001G018400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.005G041000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
16 Sobic.002G241250 - -
17 Sobic.010G097900 expressed protein -
18 Sobic.002G418500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY47, expressed -
19 Sobic.006G113400 heavy metal associated domain containing protein, expressed -
20 Sobic.002G269032 - -


Gene co-expression network
sample Sobic010G273600 Sobic010G273600 Sobic004G052500 Sobic004G052500 Sobic010G273600--Sobic004G052500 Sobic002G425300 Sobic002G425300 Sobic010G273600--Sobic002G425300 Sobic008G183300 Sobic008G183300 Sobic010G273600--Sobic008G183300 Sobic001G259500 Sobic001G259500 Sobic010G273600--Sobic001G259500 Sobic001G146500 Sobic001G146500 Sobic010G273600--Sobic001G146500 Sobic004G052500--Sobic008G183300 Sobic004G052500--Sobic001G259500 Sobic001G018400 Sobic001G018400 Sobic004G052500--Sobic001G018400 Sobic005G082700 Sobic005G082700 Sobic004G052500--Sobic005G082700 Sobic004G052500--Sobic001G146500 Sobic003G074500 Sobic003G074500 Sobic002G425300--Sobic003G074500 Sobic002G425300--Sobic010G273600 Sobic009G107500 Sobic009G107500 Sobic002G425300--Sobic009G107500 Sobic007G071000 Sobic007G071000 Sobic002G425300--Sobic007G071000 Sobic003G264901 Sobic003G264901 Sobic002G425300--Sobic003G264901 Sobic001G511000 Sobic001G511000 Sobic002G425300--Sobic001G511000 Sobic004G291800 Sobic004G291800 Sobic002G425300--Sobic004G291800 Sobic009G082200 Sobic009G082200 Sobic002G425300--Sobic009G082200 Sobic001G053900 Sobic001G053900 Sobic002G425300--Sobic001G053900 Sobic008G183300--Sobic004G052500 Sobic008G183300--Sobic001G259500 Sobic008G183300--Sobic005G082700 Sobic006G113400 Sobic006G113400 Sobic008G183300--Sobic006G113400 Sobic006G246200 Sobic006G246200 Sobic008G183300--Sobic006G246200 Sobic001G259500--Sobic001G259500 Sobic009G241500 Sobic009G241500 Sobic001G259500--Sobic009G241500 Sobic002G269032 Sobic002G269032 Sobic001G259500--Sobic002G269032 Sobic001G259500--Sobic004G052500 Sobic001G259500--Sobic001G146500 Sobic003G138100 Sobic003G138100 Sobic001G259500--Sobic003G138100 Sobic001G146500--Sobic001G259500 Sobic010G018300 Sobic010G018300 Sobic001G146500--Sobic010G018300 Sobic002G241250 Sobic002G241250 Sobic001G146500--Sobic002G241250 Sobic001G146500--Sobic004G052500 Sobic001G146400 Sobic001G146400 Sobic001G146500--Sobic001G146400
Octagon: transcription factors


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