Gene annotation
Transcriptome id Sobic.010G097900.1
Synonym
Functional annotation expressed protein
UniProt A0A194YI86
Pfam PF05078
Panther DB PTHR31621 PTHR31621:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G02430 : Protein of unknown function (DUF679)
RAP-DB (Rice) LOC_Os01g29330.1 : expressed protein
MaizeGDB (Corn) Zm00025a049424
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G146400 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSAUR16 - Auxin-responsive SAUR gene family member, expressed -
2 Sobic.004G169900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@U-box domain containing protein, expressed -
3 Sobic.010G018300 expressed protein -
4 Sobic.002G386200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
5 Sobic.001G146500 OsSAUR17 - Auxin-responsive SAUR gene family member, expressed -
6 Sobic.004G052500 - -
7 Sobic.003G138400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@WRKY9, expressed -
8 Sobic.010G273600 CHIT8 - Chitinase family protein precursor, expressed K01183: chitinase
9 Sobic.006G168000 AP2 domain containing protein, expressed K09286: EREBP-like factor
10 Sobic.001G339600 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
11 Sobic.008G183300 thaumatin, putative, expressed -
12 Sobic.006G246200 protein kinase, putative, expressed -
13 Sobic.006G113900 heavy metal associated domain containing protein, expressed -
14 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
15 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
16 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
17 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
18 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
19 Sobic.009G010400 zinc finger, RING-type, putative, expressed -
20 Sobic.005G082700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3


Gene co-expression network
sample Sobic010G097900 Sobic010G097900 Sobic001G146400 Sobic001G146400 Sobic010G097900--Sobic001G146400 Sobic004G169900 Sobic004G169900 Sobic010G097900--Sobic004G169900 Sobic010G018300 Sobic010G018300 Sobic010G097900--Sobic010G018300 Sobic002G386200 Sobic002G386200 Sobic010G097900--Sobic002G386200 Sobic001G146500 Sobic001G146500 Sobic010G097900--Sobic001G146500 Sobic004G052500 Sobic004G052500 Sobic010G097900--Sobic004G052500 Sobic003G138400 Sobic003G138400 Sobic010G097900--Sobic003G138400 Sobic010G273600 Sobic010G273600 Sobic010G097900--Sobic010G273600 Sobic006G168000 Sobic006G168000 Sobic010G097900--Sobic006G168000 Sobic001G146400--Sobic010G018300 Sobic001G146400--Sobic002G386200 Sobic002G199500 Sobic002G199500 Sobic001G146400--Sobic002G199500 Sobic001G146400--Sobic004G169900 Sobic001G146400--Sobic001G146500 Sobic009G067400 Sobic009G067400 Sobic001G146400--Sobic009G067400 Sobic001G381300 Sobic001G381300 Sobic001G146400--Sobic001G381300 Sobic010G163150 Sobic010G163150 Sobic001G146400--Sobic010G163150 Sobic009G121600 Sobic009G121600 Sobic001G146400--Sobic009G121600 Sobic004G169900--Sobic001G146400 Sobic009G010400 Sobic009G010400 Sobic004G169900--Sobic009G010400 Sobic004G169900--Sobic010G018300 Sobic004G169900--Sobic002G386200 Sobic004G006500 Sobic004G006500 Sobic004G169900--Sobic004G006500 Sobic010G102000 Sobic010G102000 Sobic004G169900--Sobic010G102000 Sobic005G165900 Sobic005G165900 Sobic004G169900--Sobic005G165900 Sobic006G257700 Sobic006G257700 Sobic004G169900--Sobic006G257700 Sobic001G064900 Sobic001G064900 Sobic004G169900--Sobic001G064900 Sobic010G018300--Sobic002G386200 Sobic010G018300--Sobic001G146400 Sobic010G018300--Sobic009G067400 Sobic010G018300--Sobic001G146500 Sobic001G259500 Sobic001G259500 Sobic010G018300--Sobic001G259500 Sobic002G386200--Sobic010G018300 Sobic002G386200--Sobic001G146400 Sobic004G181200 Sobic004G181200 Sobic002G386200--Sobic004G181200 Sobic002G386200--Sobic001G146500 Sobic002G174300 Sobic002G174300 Sobic002G386200--Sobic002G174300 Sobic006G246200 Sobic006G246200 Sobic002G386200--Sobic006G246200 Sobic006G113400 Sobic006G113400 Sobic002G386200--Sobic006G113400 Sobic002G241250 Sobic002G241250 Sobic002G386200--Sobic002G241250 Sobic002G386200--Sobic001G381300 Sobic001G146500--Sobic001G259500 Sobic001G146500--Sobic010G018300 Sobic001G146500--Sobic002G241250 Sobic001G146500--Sobic004G052500 Sobic001G146500--Sobic001G146400 Sobic008G183300 Sobic008G183300 Sobic004G052500--Sobic008G183300 Sobic004G052500--Sobic001G259500 Sobic001G018400 Sobic001G018400 Sobic004G052500--Sobic001G018400 Sobic005G082700 Sobic005G082700 Sobic004G052500--Sobic005G082700 Sobic004G052500--Sobic001G146500 Sobic010G273700 Sobic010G273700 Sobic003G138400--Sobic010G273700 Sobic004G220600 Sobic004G220600 Sobic003G138400--Sobic004G220600 Sobic003G138400--Sobic004G006500 Sobic001G339600 Sobic001G339600 Sobic003G138400--Sobic001G339600 Sobic009G227800 Sobic009G227800 Sobic003G138400--Sobic009G227800 Sobic003G138400--Sobic004G169900 Sobic004G092000 Sobic004G092000 Sobic003G138400--Sobic004G092000 Sobic002G216500 Sobic002G216500 Sobic003G138400--Sobic002G216500 Sobic003G138400--Sobic009G010400 Sobic010G273600--Sobic004G052500 Sobic002G425300 Sobic002G425300 Sobic010G273600--Sobic002G425300 Sobic010G273600--Sobic008G183300 Sobic010G273600--Sobic001G259500 Sobic010G273600--Sobic001G146500 Sobic006G168000--Sobic006G246200 Sobic009G241500 Sobic009G241500 Sobic006G168000--Sobic009G241500 Sobic006G168000--Sobic005G082700 Sobic006G168000--Sobic004G220600 Sobic005G133166 Sobic005G133166 Sobic006G168000--Sobic005G133166 Sobic008G181801 Sobic008G181801 Sobic006G168000--Sobic008G181801 Sobic010G210700 Sobic010G210700 Sobic006G168000--Sobic010G210700 Sobic001G136300 Sobic001G136300 Sobic006G168000--Sobic001G136300 Sobic009G241400 Sobic009G241400 Sobic006G168000--Sobic009G241400
Octagon: transcription factors


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