Gene annotation
Transcriptome id Sobic.004G052500.1,Sobic.004G052500.2
Synonym
Functional annotation -
UniProt A0A194YMU9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G183300 thaumatin, putative, expressed -
2 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
3 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
4 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
5 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
6 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
7 Sobic.001G018400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.005G082700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
9 Sobic.001G146500 OsSAUR17 - Auxin-responsive SAUR gene family member, expressed -
10 Sobic.006G113400 heavy metal associated domain containing protein, expressed -
11 Sobic.009G241500 expressed protein -
12 Sobic.010G273600 CHIT8 - Chitinase family protein precursor, expressed K01183: chitinase
13 Sobic.002G269032 - -
14 Sobic.006G246200 protein kinase, putative, expressed -
15 Sobic.003G037100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.003G138100 tetratricopeptide repeat, putative, expressed -
17 Sobic.001G544000 nuclear transport factor, putative, expressed -
18 Sobic.002G241250 - -
19 Sobic.004G181200 RING-H2 finger protein ATL3F, putative, expressed -
20 Sobic.010G018300 expressed protein -


Gene co-expression network
sample Sobic004G052500 Sobic004G052500 Sobic008G183300 Sobic008G183300 Sobic004G052500--Sobic008G183300 Sobic001G259500 Sobic001G259500 Sobic004G052500--Sobic001G259500 Sobic001G018400 Sobic001G018400 Sobic004G052500--Sobic001G018400 Sobic005G082700 Sobic005G082700 Sobic004G052500--Sobic005G082700 Sobic001G146500 Sobic001G146500 Sobic004G052500--Sobic001G146500 Sobic008G183300--Sobic004G052500 Sobic008G183300--Sobic001G259500 Sobic008G183300--Sobic005G082700 Sobic006G113400 Sobic006G113400 Sobic008G183300--Sobic006G113400 Sobic006G246200 Sobic006G246200 Sobic008G183300--Sobic006G246200 Sobic001G259500--Sobic001G259500 Sobic009G241500 Sobic009G241500 Sobic001G259500--Sobic009G241500 Sobic002G269032 Sobic002G269032 Sobic001G259500--Sobic002G269032 Sobic001G259500--Sobic004G052500 Sobic001G259500--Sobic001G146500 Sobic003G138100 Sobic003G138100 Sobic001G259500--Sobic003G138100 Sobic001G018400--Sobic004G052500 Sobic001G018400--Sobic008G183300 Sobic001G018400--Sobic001G146500 Sobic003G291700 Sobic003G291700 Sobic001G018400--Sobic003G291700 Sobic003G031100 Sobic003G031100 Sobic001G018400--Sobic003G031100 Sobic005G171100 Sobic005G171100 Sobic001G018400--Sobic005G171100 Sobic001G018400--Sobic005G082700 Sobic006G113900 Sobic006G113900 Sobic001G018400--Sobic006G113900 Sobic010G273600 Sobic010G273600 Sobic001G018400--Sobic010G273600 Sobic005G082700--Sobic009G241500 Sobic005G082700--Sobic006G246200 Sobic008G181801 Sobic008G181801 Sobic005G082700--Sobic008G181801 Sobic001G136300 Sobic001G136300 Sobic005G082700--Sobic001G136300 Sobic005G226100 Sobic005G226100 Sobic005G082700--Sobic005G226100 Sobic005G133166 Sobic005G133166 Sobic005G082700--Sobic005G133166 Sobic005G082700--Sobic004G052500 Sobic005G082700--Sobic008G183300 Sobic003G037100 Sobic003G037100 Sobic005G082700--Sobic003G037100 Sobic001G146500--Sobic001G259500 Sobic010G018300 Sobic010G018300 Sobic001G146500--Sobic010G018300 Sobic002G241250 Sobic002G241250 Sobic001G146500--Sobic002G241250 Sobic001G146500--Sobic004G052500 Sobic001G146400 Sobic001G146400 Sobic001G146500--Sobic001G146400
Octagon: transcription factors


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